RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 DNMT1P26358 1616 aaKnown RBP27.74■■■□□ 2.03
HLA-A-201ENST00000376802 FBXO31Q5XUX0 539 aaPredicted RBP27.73■■■□□ 2.03
HLA-A-201ENST00000376802 A2ML1A8K2U0 1454 aa27.73■■■□□ 2.03
HLA-A-201ENST00000376802 MAP3K1Q13233 1512 aa27.73■■■□□ 2.03
HLA-A-201ENST00000376802 KDM5DQ9BY66 1539 aa27.73■■■□□ 2.03
HLA-A-201ENST00000376802 FAM135AQ9P2D6 1515 aa27.72■■■□□ 2.03
HLA-A-201ENST00000376802 IQSEC2Q5JU85 1478 aa27.72■■■□□ 2.03
HLA-A-201ENST00000376802 TSPY4P0CV99 314 aa27.71■■■□□ 2.03
HLA-A-201ENST00000376802 TSPY10P0CW01 314 aa27.71■■■□□ 2.03
HLA-A-201ENST00000376802 PZPP20742 1482 aa27.7■■■□□ 2.02
HLA-A-201ENST00000376802 ZNF335Q9H4Z2 1342 aaPredicted RBP27.7■■■□□ 2.02
HLA-A-201ENST00000376802 WASHC2CQ9Y4E1 1318 aa27.69■■■□□ 2.02
HLA-A-201ENST00000376802 MAST1Q9Y2H9 1570 aa27.68■■■□□ 2.02
HLA-A-201ENST00000376802 TNRQ92752 1358 aa27.67■■■□□ 2.02
HLA-A-201ENST00000376802 RNF17Q9BXT8 1623 aaKnown RBP27.64■■■□□ 2.02
HLA-A-201ENST00000376802 MYOM3Q5VTT5 1437 aa27.64■■■□□ 2.01
HLA-A-201ENST00000376802 MIA2Q96PC5 1412 aa27.64■■■□□ 2.01
HLA-A-201ENST00000376802 POLR1AO95602 1720 aaPredicted RBP27.62■■■□□ 2.01
HLA-A-201ENST00000376802 NEURL4Q96JN8 1562 aa27.6■■■□□ 2.01
HLA-A-201ENST00000376802 EIF2AK4Q9P2K8 1649 aaKnown RBP27.58■■■□□ 2.01
HLA-A-201ENST00000376802 ABCC3O15438 1527 aa27.57■■■□□ 2
HLA-A-201ENST00000376802 MROH1Q8NDA8 1641 aa27.57■■■□□ 2
HLA-A-201ENST00000376802 ZC3H13Q5T200 1668 aaKnown RBP27.56■■■□□ 2
HLA-A-201ENST00000376802 NLRP1Q9C000 1473 aa27.55■■■□□ 2
HLA-A-201ENST00000376802 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.54■■■□□ 2
HLA-A-201ENST00000376802 UGGT1Q9NYU2 1555 aa27.52■■■□□ 2
HLA-A-201ENST00000376802 SPATA31D1Q6ZQQ2 1576 aa27.51■■□□□ 1.99
HLA-A-201ENST00000376802 CEP152O94986 1710 aa27.5■■□□□ 1.99
HLA-A-201ENST00000376802 THEMISQ8N1K5 641 aaPredicted RBP27.5■■□□□ 1.99
HLA-A-201ENST00000376802 DISP3Q9P2K9 1392 aa27.5■■□□□ 1.99
HLA-A-201ENST00000376802 DUOX2Q9NRD8 1548 aa27.5■■□□□ 1.99
HLA-A-201ENST00000376802 CFAP65Q6ZU64 1925 aaKnown RBP27.5■■□□□ 1.99
HLA-A-201ENST00000376802 UBAP1LF5GYI3 381 aa27.49■■□□□ 1.99
HLA-A-201ENST00000376802 CROCC2H7BZ55 1655 aa27.49■■□□□ 1.99
HLA-A-201ENST00000376802 ANKLE2Q86XL3 938 aa27.48■■□□□ 1.99
HLA-A-201ENST00000376802 DEPDC5O75140 1603 aa27.47■■□□□ 1.99
HLA-A-201ENST00000376802 ABCC5O15440 1437 aa27.47■■□□□ 1.99
HLA-A-201ENST00000376802 PTPN23Q9H3S7 1636 aa27.47■■□□□ 1.99
HLA-A-201ENST00000376802 ERVK-7P63135 1459 aa27.47■■□□□ 1.99
HLA-A-201ENST00000376802 MED14O60244 1454 aa27.46■■□□□ 1.99
HLA-A-201ENST00000376802 SHANK2Q9UPX8 1470 aa27.45■■□□□ 1.98
HLA-A-201ENST00000376802 ILDR2Q71H61 639 aa27.43■■□□□ 1.98
HLA-A-201ENST00000376802 KIF15Q9NS87 1388 aa27.43■■□□□ 1.98
HLA-A-201ENST00000376802 VWDEQ8N2E2 1590 aa27.43■■□□□ 1.98
HLA-A-201ENST00000376802 CPS1P31327 1500 aa27.43■■□□□ 1.98
HLA-A-201ENST00000376802 NPHP4O75161 1426 aaPredicted RBP27.41■■□□□ 1.98
HLA-A-201ENST00000376802 APLP2Q06481 763 aa27.41■■□□□ 1.98
HLA-A-201ENST00000376802 RRP7BPQ9NSQ0 103 aa27.41■■□□□ 1.98
HLA-A-201ENST00000376802 PRDM15P57071 1507 aaPredicted RBP27.4■■□□□ 1.98
HLA-A-201ENST00000376802 DAPK1P53355 1430 aa27.39■■□□□ 1.97
HLA-A-201ENST00000376802 FGD6Q6ZV73 1430 aa27.39■■□□□ 1.97
HLA-A-201ENST00000376802 ERBINQ96RT1 1412 aa27.39■■□□□ 1.97
HLA-A-201ENST00000376802 IQGAP1P46940 1657 aa27.39■■□□□ 1.97
HLA-A-201ENST00000376802 UBR1Q8IWV7 1749 aa27.38■■□□□ 1.97
HLA-A-201ENST00000376802 ARHGAP31Q2M1Z3 1444 aa27.35■■□□□ 1.97
HLA-A-201ENST00000376802 STRCP1A6NGW2 1772 aa27.34■■□□□ 1.97
HLA-A-201ENST00000376802 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.29■■□□□ 1.96
HLA-A-201ENST00000376802 CHIC2Q9UKJ5 165 aa27.28■■□□□ 1.96
HLA-A-201ENST00000376802 ALKQ9UM73 1620 aa27.28■■□□□ 1.96
HLA-A-201ENST00000376802 TOM1O60784 492 aa27.27■■□□□ 1.96
HLA-A-201ENST00000376802 ARHGAP23Q9P227 1491 aa27.27■■□□□ 1.96
HLA-A-201ENST00000376802 PIP4K2BP78356 416 aa27.26■■□□□ 1.95
HLA-A-201ENST00000376802 ANKRD30AQ9BXX3 1397 aa27.26■■□□□ 1.95
HLA-A-201ENST00000376802 SLIT1O75093 1534 aa27.26■■□□□ 1.95
HLA-A-201ENST00000376802 LTKP29376 864 aa27.25■■□□□ 1.95
HLA-A-201ENST00000376802 SCAF11Q99590 1463 aaKnown RBP27.25■■□□□ 1.95
HLA-A-201ENST00000376802 HSPA1LP34931 641 aa27.24■■□□□ 1.95
HLA-A-201ENST00000376802 PIK3C2BO00750 1634 aa27.24■■□□□ 1.95
HLA-A-201ENST00000376802 LMTK2Q8IWU2 1503 aa27.23■■□□□ 1.95
HLA-A-201ENST00000376802 LRRC7Q96NW7 1537 aa27.23■■□□□ 1.95
HLA-A-201ENST00000376802 KANK1Q14678 1352 aa27.22■■□□□ 1.95
HLA-A-201ENST00000376802 SCAF1Q9H7N4 1312 aaKnown RBP27.22■■□□□ 1.95
HLA-A-201ENST00000376802 SOCS7O14512 581 aa27.22■■□□□ 1.95
HLA-A-201ENST00000376802 ADGRL2O95490 1459 aa27.2■■□□□ 1.94
HLA-A-201ENST00000376802 TXNDC2Q86VQ3 553 aa27.19■■□□□ 1.94
HLA-A-201ENST00000376802 SYNMO15061 1565 aa27.18■■□□□ 1.94
HLA-A-201ENST00000376802 KDM5AP29375 1690 aaKnown RBP27.17■■□□□ 1.94
HLA-A-201ENST00000376802 IDI1Q13907 227 aa27.16■■□□□ 1.94
HLA-A-201ENST00000376802 TMEM2Q9UHN6 1383 aa27.15■■□□□ 1.94
HLA-A-201ENST00000376802 EFCAB6Q5THR3 1501 aa27.14■■□□□ 1.94
HLA-A-201ENST00000376802 XIRP1Q702N8 1843 aaKnown RBP27.13■■□□□ 1.93
HLA-A-201ENST00000376802 FAM50AQ14320 339 aaKnown RBP27.13■■□□□ 1.93
HLA-A-201ENST00000376802 NOS1P29475 1434 aa27.12■■□□□ 1.93
HLA-A-201ENST00000376802 EID1Q9Y6B2 187 aa27.12■■□□□ 1.93
HLA-A-201ENST00000376802 STAG3Q9UJ98 1225 aa27.09■■□□□ 1.93
HLA-A-201ENST00000376802 MED1Q15648 1581 aaPredicted RBP27.09■■□□□ 1.93
HLA-A-201ENST00000376802 ANKRD50Q9ULJ7 1429 aa27.07■■□□□ 1.92
HLA-A-201ENST00000376802 TET3O43151 1660 aa27.06■■□□□ 1.92
HLA-A-201ENST00000376802 ADGRB3O60242 1522 aa27.03■■□□□ 1.92
HLA-A-201ENST00000376802 RPRD2Q5VT52 1461 aaKnown RBP27.02■■□□□ 1.92
HLA-A-201ENST00000376802 SLC52A1Q9NWF4 448 aa27.01■■□□□ 1.91
HLA-A-201ENST00000376802 MYO5BQ9ULV0 1848 aa27.01■■□□□ 1.91
HLA-A-201ENST00000376802 GCC2Q8IWJ2 1684 aa26.98■■□□□ 1.91
HLA-A-201ENST00000376802 UNC13BO14795 1591 aa26.98■■□□□ 1.91
HLA-A-201ENST00000376802 SLC26A8Q96RN1 970 aa26.97■■□□□ 1.91
HLA-A-201ENST00000376802 SENP3Q9H4L4 574 aaPredicted RBP26.96■■□□□ 1.91
HLA-A-201ENST00000376802 KCNA6P17658 529 aa26.95■■□□□ 1.91
HLA-A-201ENST00000376802 TMEM131LA2VDJ0 1609 aa26.93■■□□□ 1.9
HLA-A-201ENST00000376802 TMEM94Q12767 1356 aa26.93■■□□□ 1.9
HLA-A-201ENST00000376802 ZFYVE9O95405 1425 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms