RNA–Protein interactions for RNA: ENST00000376800.7

HCG9-201, Transcript of HLA complex group 9, humanhuman

TSL 1 (best) BASIC

Gene HCG9, Length 663 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG9-201ENST00000376800 RNF17Q9BXT8 1623 aaKnown RBP21.29■■□□□ 1
HCG9-201ENST00000376800 MROH1Q8NDA8 1641 aa21.27■■□□□ 1
HCG9-201ENST00000376800 APLP2Q06481 763 aa21.27■■□□□ 1
HCG9-201ENST00000376800 CEP152O94986 1710 aa21.26■□□□□ 0.99
HCG9-201ENST00000376800 FBXO31Q5XUX0 539 aaPredicted RBP21.26■□□□□ 0.99
HCG9-201ENST00000376800 DNMT1P26358 1616 aaKnown RBP21.25■□□□□ 0.99
HCG9-201ENST00000376800 EIF2AK4Q9P2K8 1649 aaKnown RBP21.25■□□□□ 0.99
HCG9-201ENST00000376800 ABCC5O15440 1437 aa21.24■□□□□ 0.99
HCG9-201ENST00000376800 FGD6Q6ZV73 1430 aa21.24■□□□□ 0.99
HCG9-201ENST00000376800 CERKQ8TCT0 537 aa21.24■□□□□ 0.99
HCG9-201ENST00000376800 PZPP20742 1482 aa21.23■□□□□ 0.99
HCG9-201ENST00000376800 NCKAP5LQ9HCH0 1330 aa21.23■□□□□ 0.99
HCG9-201ENST00000376800 PTPRTO14522 1441 aa21.22■□□□□ 0.99
HCG9-201ENST00000376800 PPP6R1Q9UPN7 881 aa21.22■□□□□ 0.99
HCG9-201ENST00000376800 ABCC3O15438 1527 aa21.22■□□□□ 0.99
HCG9-201ENST00000376800 TCOF1Q13428 1488 aaKnown RBP21.21■□□□□ 0.99
HCG9-201ENST00000376800 FAM135AQ9P2D6 1515 aa21.21■□□□□ 0.99
HCG9-201ENST00000376800 WASHC2CQ9Y4E1 1318 aa21.21■□□□□ 0.99
HCG9-201ENST00000376800 DAPK1P53355 1430 aa21.21■□□□□ 0.99
HCG9-201ENST00000376800 ZC3H13Q5T200 1668 aaKnown RBP21.2■□□□□ 0.98
HCG9-201ENST00000376800 A2ML1A8K2U0 1454 aa21.2■□□□□ 0.98
HCG9-201ENST00000376800 SHANK2Q9UPX8 1470 aa21.2■□□□□ 0.98
HCG9-201ENST00000376800 DUOX2Q9NRD8 1548 aa21.19■□□□□ 0.98
HCG9-201ENST00000376800 DMRT2Q9Y5R5 561 aa21.19■□□□□ 0.98
HCG9-201ENST00000376800 CFAP65Q6ZU64 1925 aaKnown RBP21.19■□□□□ 0.98
HCG9-201ENST00000376800 TNRQ92752 1358 aa21.19■□□□□ 0.98
HCG9-201ENST00000376800 LTBP4Q8N2S1 1624 aa21.18■□□□□ 0.98
HCG9-201ENST00000376800 KIF15Q9NS87 1388 aa21.17■□□□□ 0.98
HCG9-201ENST00000376800 POLR1AO95602 1720 aaPredicted RBP21.16■□□□□ 0.98
HCG9-201ENST00000376800 PLA2R1Q13018 1463 aa21.16■□□□□ 0.98
HCG9-201ENST00000376800 RRP7BPQ9NSQ0 103 aa21.15■□□□□ 0.98
HCG9-201ENST00000376800 CHIC2Q9UKJ5 165 aa21.14■□□□□ 0.97
HCG9-201ENST00000376800 NEURL4Q96JN8 1562 aa21.13■□□□□ 0.97
HCG9-201ENST00000376800 PRDM15P57071 1507 aaPredicted RBP21.13■□□□□ 0.97
HCG9-201ENST00000376800 DEPDC5O75140 1603 aa21.11■□□□□ 0.97
HCG9-201ENST00000376800 SPATA31D1Q6ZQQ2 1576 aa21.11■□□□□ 0.97
HCG9-201ENST00000376800 ZNF335Q9H4Z2 1342 aaPredicted RBP21.1■□□□□ 0.97
HCG9-201ENST00000376800 ERVK-7P63135 1459 aa21.1■□□□□ 0.97
HCG9-201ENST00000376800 ERBINQ96RT1 1412 aa21.1■□□□□ 0.97
HCG9-201ENST00000376800 UGGT1Q9NYU2 1555 aa21.08■□□□□ 0.97
HCG9-201ENST00000376800 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.08■□□□□ 0.96
HCG9-201ENST00000376800 FAM50AQ14320 339 aaKnown RBP21.07■□□□□ 0.96
HCG9-201ENST00000376800 NLRP1Q9C000 1473 aa21.06■□□□□ 0.96
HCG9-201ENST00000376800 PKD2Q13563 968 aa21.05■□□□□ 0.96
HCG9-201ENST00000376800 PPARGC1BQ86YN6 1023 aaKnown RBP21.05■□□□□ 0.96
HCG9-201ENST00000376800 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.05■□□□□ 0.96
HCG9-201ENST00000376800 UBR1Q8IWV7 1749 aa21.04■□□□□ 0.96
HCG9-201ENST00000376800 ADGRL2O95490 1459 aa21.03■□□□□ 0.96
HCG9-201ENST00000376800 ANKRD30AQ9BXX3 1397 aa21.03■□□□□ 0.96
HCG9-201ENST00000376800 VWDEQ8N2E2 1590 aa21.01■□□□□ 0.95
HCG9-201ENST00000376800 PIK3C2BO00750 1634 aa20.98■□□□□ 0.95
HCG9-201ENST00000376800 IQGAP1P46940 1657 aa20.98■□□□□ 0.95
HCG9-201ENST00000376800 ARHGAP31Q2M1Z3 1444 aa20.96■□□□□ 0.95
HCG9-201ENST00000376800 IQSEC2Q5JU85 1478 aa20.95■□□□□ 0.94
HCG9-201ENST00000376800 LMTK2Q8IWU2 1503 aa20.95■□□□□ 0.94
HCG9-201ENST00000376800 SYNMO15061 1565 aa20.95■□□□□ 0.94
HCG9-201ENST00000376800 THEMISQ8N1K5 641 aaPredicted RBP20.95■□□□□ 0.94
HCG9-201ENST00000376800 NPHP4O75161 1426 aaPredicted RBP20.95■□□□□ 0.94
HCG9-201ENST00000376800 EFCAB6Q5THR3 1501 aa20.94■□□□□ 0.94
HCG9-201ENST00000376800 STRCP1A6NGW2 1772 aa20.94■□□□□ 0.94
HCG9-201ENST00000376800 ANKLE2Q86XL3 938 aa20.93■□□□□ 0.94
HCG9-201ENST00000376800 KANK1Q14678 1352 aa20.93■□□□□ 0.94
HCG9-201ENST00000376800 MED14O60244 1454 aa20.93■□□□□ 0.94
HCG9-201ENST00000376800 ANKRD50Q9ULJ7 1429 aa20.92■□□□□ 0.94
HCG9-201ENST00000376800 UNC13BO14795 1591 aa20.89■□□□□ 0.93
HCG9-201ENST00000376800 ITGAEP38570 1179 aa20.88■□□□□ 0.93
HCG9-201ENST00000376800 ARHGAP23Q9P227 1491 aa20.88■□□□□ 0.93
HCG9-201ENST00000376800 TET3O43151 1660 aa20.86■□□□□ 0.93
HCG9-201ENST00000376800 MYO5BQ9ULV0 1848 aa20.86■□□□□ 0.93
HCG9-201ENST00000376800 SLIT1O75093 1534 aa20.86■□□□□ 0.93
HCG9-201ENST00000376800 SCAF11Q99590 1463 aaKnown RBP20.86■□□□□ 0.93
HCG9-201ENST00000376800 CPS1P31327 1500 aa20.85■□□□□ 0.93
HCG9-201ENST00000376800 UBAP1LF5GYI3 381 aa20.85■□□□□ 0.93
HCG9-201ENST00000376800 LTKP29376 864 aa20.85■□□□□ 0.93
HCG9-201ENST00000376800 GCC2Q8IWJ2 1684 aa20.85■□□□□ 0.93
HCG9-201ENST00000376800 NOS1P29475 1434 aa20.84■□□□□ 0.93
HCG9-201ENST00000376800 E9PCH4 1651 aa20.83■□□□□ 0.92
HCG9-201ENST00000376800 IDI1Q13907 227 aa20.82■□□□□ 0.92
HCG9-201ENST00000376800 KDM5AP29375 1690 aaKnown RBP20.82■□□□□ 0.92
HCG9-201ENST00000376800 ADGRB3O60242 1522 aa20.82■□□□□ 0.92
HCG9-201ENST00000376800 ALKQ9UM73 1620 aa20.8■□□□□ 0.92
HCG9-201ENST00000376800 IQGAP3Q86VI3 1631 aa20.79■□□□□ 0.92
HCG9-201ENST00000376800 TXNDC2Q86VQ3 553 aa20.79■□□□□ 0.92
HCG9-201ENST00000376800 ROCK1Q13464 1354 aa20.79■□□□□ 0.92
HCG9-201ENST00000376800 TMEM2Q9UHN6 1383 aa20.79■□□□□ 0.92
HCG9-201ENST00000376800 STAG3Q9UJ98 1225 aa20.78■□□□□ 0.92
HCG9-201ENST00000376800 XIRP1Q702N8 1843 aaKnown RBP20.77■□□□□ 0.92
HCG9-201ENST00000376800 SENP3Q9H4L4 574 aaPredicted RBP20.77■□□□□ 0.92
HCG9-201ENST00000376800 LRRC7Q96NW7 1537 aa20.77■□□□□ 0.92
HCG9-201ENST00000376800 RPRD2Q5VT52 1461 aaKnown RBP20.75■□□□□ 0.91
HCG9-201ENST00000376800 SCAF1Q9H7N4 1312 aaKnown RBP20.75■□□□□ 0.91
HCG9-201ENST00000376800 PIP4K2BP78356 416 aa20.74■□□□□ 0.91
HCG9-201ENST00000376800 TMEM131LA2VDJ0 1609 aa20.73■□□□□ 0.91
HCG9-201ENST00000376800 RRBP1Q9P2E9 1410 aaKnown RBP20.72■□□□□ 0.91
HCG9-201ENST00000376800 EID1Q9Y6B2 187 aa20.71■□□□□ 0.91
HCG9-201ENST00000376800 NUP155O75694 1391 aa20.7■□□□□ 0.9
HCG9-201ENST00000376800 DISP3Q9P2K9 1392 aa20.7■□□□□ 0.9
HCG9-201ENST00000376800 SLC26A8Q96RN1 970 aa20.67■□□□□ 0.9
HCG9-201ENST00000376800 SLC52A1Q9NWF4 448 aa20.67■□□□□ 0.9
HCG9-201ENST00000376800 ZFYVE9O95405 1425 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms