RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 SHANK2Q9UPX8 1470 aa22.05■■□□□ 1.12
CLCN6-203ENST00000376490 WASHC2CQ9Y4E1 1318 aa22.04■■□□□ 1.12
CLCN6-203ENST00000376490 EIF2AK4Q9P2K8 1649 aaKnown RBP22.03■■□□□ 1.12
CLCN6-203ENST00000376490 DUOX2Q9NRD8 1548 aa22.03■■□□□ 1.12
CLCN6-203ENST00000376490 NPATQ14207 1427 aa22.03■■□□□ 1.12
CLCN6-203ENST00000376490 PTPRKQ15262 1439 aa22.02■■□□□ 1.12
CLCN6-203ENST00000376490 RNF17Q9BXT8 1623 aaKnown RBP22.02■■□□□ 1.11
CLCN6-203ENST00000376490 CFAP65Q6ZU64 1925 aaKnown RBP22.02■■□□□ 1.11
CLCN6-203ENST00000376490 KIF15Q9NS87 1388 aa22.01■■□□□ 1.11
CLCN6-203ENST00000376490 STRCQ7RTU9 1775 aa22.01■■□□□ 1.11
CLCN6-203ENST00000376490 KDM5DQ9BY66 1539 aa22.01■■□□□ 1.11
CLCN6-203ENST00000376490 FBXO31Q5XUX0 539 aaPredicted RBP21.98■■□□□ 1.11
CLCN6-203ENST00000376490 MROH1Q8NDA8 1641 aa21.97■■□□□ 1.11
CLCN6-203ENST00000376490 ANKRD30AQ9BXX3 1397 aa21.97■■□□□ 1.11
CLCN6-203ENST00000376490 CEP152O94986 1710 aa21.97■■□□□ 1.11
CLCN6-203ENST00000376490 FAM135AQ9P2D6 1515 aa21.96■■□□□ 1.11
CLCN6-203ENST00000376490 NCOA1Q15788 1441 aa21.96■■□□□ 1.11
CLCN6-203ENST00000376490 MYO3AQ8NEV4 1616 aa21.95■■□□□ 1.1
CLCN6-203ENST00000376490 ZC3H13Q5T200 1668 aaKnown RBP21.93■■□□□ 1.1
CLCN6-203ENST00000376490 ERBINQ96RT1 1412 aa21.93■■□□□ 1.1
CLCN6-203ENST00000376490 ABCC3O15438 1527 aa21.92■■□□□ 1.1
CLCN6-203ENST00000376490 PZPP20742 1482 aa21.92■■□□□ 1.1
CLCN6-203ENST00000376490 ZNF142P52746 1687 aaPredicted RBP21.91■■□□□ 1.1
CLCN6-203ENST00000376490 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.91■■□□□ 1.11e-7■■□□□ 11.6
CLCN6-203ENST00000376490 ADGRL2O95490 1459 aa21.9■■□□□ 1.1
CLCN6-203ENST00000376490 CAMSAP1Q5T5Y3 1602 aa21.89■■□□□ 1.09
CLCN6-203ENST00000376490 CEP170BQ9Y4F5 1589 aaPredicted RBP21.89■■□□□ 1.09
CLCN6-203ENST00000376490 DEPDC5O75140 1603 aa21.88■■□□□ 1.09
CLCN6-203ENST00000376490 TNRQ92752 1358 aa21.87■■□□□ 1.09
CLCN6-203ENST00000376490 ITGAEP38570 1179 aa21.87■■□□□ 1.09
CLCN6-203ENST00000376490 DMRT2Q9Y5R5 561 aa21.87■■□□□ 1.09
CLCN6-203ENST00000376490 PRDM15P57071 1507 aaPredicted RBP21.86■■□□□ 1.09
CLCN6-203ENST00000376490 A2ML1A8K2U0 1454 aa21.84■■□□□ 1.09
CLCN6-203ENST00000376490 NCKAP5LQ9HCH0 1330 aa21.83■■□□□ 1.09
CLCN6-203ENST00000376490 ILDR1Q86SU0 546 aaPredicted RBP21.82■■□□□ 1.08
CLCN6-203ENST00000376490 KANK1Q14678 1352 aa21.82■■□□□ 1.08
CLCN6-203ENST00000376490 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.82■■□□□ 1.08
CLCN6-203ENST00000376490 ANKRD50Q9ULJ7 1429 aa21.81■■□□□ 1.08
CLCN6-203ENST00000376490 SPATA31D1Q6ZQQ2 1576 aa21.8■■□□□ 1.08
CLCN6-203ENST00000376490 ERVK-7P63135 1459 aa21.79■■□□□ 1.08
CLCN6-203ENST00000376490 PTPRTO14522 1441 aa21.79■■□□□ 1.08
CLCN6-203ENST00000376490 VWDEQ8N2E2 1590 aa21.78■■□□□ 1.08
CLCN6-203ENST00000376490 ROCK1Q13464 1354 aa21.77■■□□□ 1.08
CLCN6-203ENST00000376490 ARHGAP31Q2M1Z3 1444 aa21.77■■□□□ 1.08
CLCN6-203ENST00000376490 PLA2R1Q13018 1463 aa21.77■■□□□ 1.07
CLCN6-203ENST00000376490 NLRP1Q9C000 1473 aa21.77■■□□□ 1.07
CLCN6-203ENST00000376490 RRBP1Q9P2E9 1410 aaKnown RBP21.76■■□□□ 1.07
CLCN6-203ENST00000376490 PKD2Q13563 968 aa21.75■■□□□ 1.07
CLCN6-203ENST00000376490 UGGT1Q9NYU2 1555 aa21.74■■□□□ 1.07
CLCN6-203ENST00000376490 THEMISQ8N1K5 641 aaPredicted RBP21.74■■□□□ 1.07
CLCN6-203ENST00000376490 POLR1AO95602 1720 aaPredicted RBP21.74■■□□□ 1.07
CLCN6-203ENST00000376490 LMTK2Q8IWU2 1503 aa21.74■■□□□ 1.07
CLCN6-203ENST00000376490 CERKQ8TCT0 537 aa21.72■■□□□ 1.07
CLCN6-203ENST00000376490 UBR1Q8IWV7 1749 aa21.7■■□□□ 1.06
CLCN6-203ENST00000376490 UNC13BO14795 1591 aa21.7■■□□□ 1.06
CLCN6-203ENST00000376490 EFCAB6Q5THR3 1501 aa21.69■■□□□ 1.06
CLCN6-203ENST00000376490 FBXO41Q8TF61 875 aa21.68■■□□□ 1.06
CLCN6-203ENST00000376490 TET3O43151 1660 aa21.67■■□□□ 1.06
CLCN6-203ENST00000376490 GCC2Q8IWJ2 1684 aa21.67■■□□□ 1.06
CLCN6-203ENST00000376490 ANKLE2Q86XL3 938 aa21.67■■□□□ 1.06
CLCN6-203ENST00000376490 PIK3C2BO00750 1634 aa21.66■■□□□ 1.06
CLCN6-203ENST00000376490 NEURL4Q96JN8 1562 aa21.65■■□□□ 1.06
CLCN6-203ENST00000376490 IDI1Q13907 227 aa21.64■■□□□ 1.05
CLCN6-203ENST00000376490 LTBP4Q8N2S1 1624 aa21.64■■□□□ 1.05
CLCN6-203ENST00000376490 SYNMO15061 1565 aa21.64■■□□□ 1.05
CLCN6-203ENST00000376490 IQGAP3Q86VI3 1631 aa21.62■■□□□ 1.05
CLCN6-203ENST00000376490 ZNF335Q9H4Z2 1342 aaPredicted RBP21.62■■□□□ 1.05
CLCN6-203ENST00000376490 E9PCH4 1651 aa21.62■■□□□ 1.05
CLCN6-203ENST00000376490 NOS1P29475 1434 aa21.62■■□□□ 1.05
CLCN6-203ENST00000376490 NUP155O75694 1391 aa21.61■■□□□ 1.05
CLCN6-203ENST00000376490 RPRD2Q5VT52 1461 aaKnown RBP21.59■■□□□ 1.05
CLCN6-203ENST00000376490 STAG3Q9UJ98 1225 aa21.59■■□□□ 1.05
CLCN6-203ENST00000376490 MYO5BQ9ULV0 1848 aa21.59■■□□□ 1.05
CLCN6-203ENST00000376490 NAIPQ13075 1403 aa21.58■■□□□ 1.05
CLCN6-203ENST00000376490 MED14O60244 1454 aa21.58■■□□□ 1.04
CLCN6-203ENST00000376490 KDM5AP29375 1690 aaKnown RBP21.57■■□□□ 1.04
CLCN6-203ENST00000376490 IQGAP1P46940 1657 aa21.57■■□□□ 1.04
CLCN6-203ENST00000376490 NPHP4O75161 1426 aaPredicted RBP21.57■■□□□ 1.04
CLCN6-203ENST00000376490 LTKP29376 864 aa21.56■■□□□ 1.04
CLCN6-203ENST00000376490 TXNDC2Q86VQ3 553 aa21.56■■□□□ 1.04
CLCN6-203ENST00000376490 SLC52A1Q9NWF4 448 aa21.56■■□□□ 1.04
CLCN6-203ENST00000376490 SLIT1O75093 1534 aa21.55■■□□□ 1.04
CLCN6-203ENST00000376490 ARHGAP23Q9P227 1491 aa21.54■■□□□ 1.04
CLCN6-203ENST00000376490 SCAF11Q99590 1463 aaKnown RBP21.52■■□□□ 1.03
CLCN6-203ENST00000376490 TMEM2Q9UHN6 1383 aa21.51■■□□□ 1.03
CLCN6-203ENST00000376490 EID1Q9Y6B2 187 aa21.51■■□□□ 1.03
CLCN6-203ENST00000376490 HFM1A2PYH4 1435 aa21.5■■□□□ 1.03
CLCN6-203ENST00000376490 ADGRB3O60242 1522 aa21.5■■□□□ 1.03
CLCN6-203ENST00000376490 TRIM52Q96A61 297 aa21.48■■□□□ 1.03
CLCN6-203ENST00000376490 STRCP1A6NGW2 1772 aa21.48■■□□□ 1.03
CLCN6-203ENST00000376490 TMEM131LA2VDJ0 1609 aa21.47■■□□□ 1.03
CLCN6-203ENST00000376490 SPHKAPQ2M3C7 1700 aa21.46■■□□□ 1.03
CLCN6-203ENST00000376490 CHGAP10645 457 aaKnown RBP21.46■■□□□ 1.03
CLCN6-203ENST00000376490 IQSEC2Q5JU85 1478 aa21.45■■□□□ 1.03
CLCN6-203ENST00000376490 CPS1P31327 1500 aa21.42■■□□□ 1.02
CLCN6-203ENST00000376490 SENP3Q9H4L4 574 aaPredicted RBP21.41■■□□□ 1.02
CLCN6-203ENST00000376490 ZFYVE9O95405 1425 aa21.38■■□□□ 1.01
CLCN6-203ENST00000376490 RIMS2Q9UQ26 1411 aa21.38■■□□□ 1.01
CLCN6-203ENST00000376490 SLC26A8Q96RN1 970 aa21.38■■□□□ 1.01
CLCN6-203ENST00000376490 UBAP1LF5GYI3 381 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms