RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 ABCA6Q8N139 1617 aa15.55■□□□□ 0.08
PDPN-203ENST00000376061 CCER1Q8TC90 406 aaPredicted RBP15.54■□□□□ 0.08
PDPN-203ENST00000376061 MLH3Q9UHC1 1453 aa15.53■□□□□ 0.08
PDPN-203ENST00000376061 UNC13BO14795 1591 aa15.52■□□□□ 0.08
PDPN-203ENST00000376061 ERBINQ96RT1 1412 aa15.51■□□□□ 0.07
PDPN-203ENST00000376061 EIF2AK4Q9P2K8 1649 aaKnown RBP15.5■□□□□ 0.07
PDPN-203ENST00000376061 DIP2CQ9Y2E4 1556 aa15.5■□□□□ 0.07
PDPN-203ENST00000376061 KDM5DQ9BY66 1539 aa15.5■□□□□ 0.07
PDPN-203ENST00000376061 DEPDC5O75140 1603 aa15.48■□□□□ 0.07
PDPN-203ENST00000376061 RAPGEF3O95398 923 aa15.48■□□□□ 0.07
PDPN-203ENST00000376061 PZPP20742 1482 aa15.47■□□□□ 0.07
PDPN-203ENST00000376061 MAGI2Q86UL8 1455 aa15.47■□□□□ 0.07
PDPN-203ENST00000376061 COL17A1Q9UMD9 1497 aaPredicted RBP15.47■□□□□ 0.07
PDPN-203ENST00000376061 BCORL1Q5H9F3 1711 aa15.46■□□□□ 0.07
PDPN-203ENST00000376061 ACIN1Q9UKV3 1341 aaKnown RBP15.45■□□□□ 0.06
PDPN-203ENST00000376061 A2MP01023 1474 aa15.45■□□□□ 0.06
PDPN-203ENST00000376061 IQGAP3Q86VI3 1631 aa15.45■□□□□ 0.06
PDPN-203ENST00000376061 ARHGEF40Q8TER5 1519 aa15.44■□□□□ 0.06
PDPN-203ENST00000376061 YEATS2Q9ULM3 1422 aa15.44■□□□□ 0.06
PDPN-203ENST00000376061 TRHP20396 242 aaPredicted RBP15.44■□□□□ 0.06
PDPN-203ENST00000376061 RNF17Q9BXT8 1623 aaKnown RBP15.44■□□□□ 0.06
PDPN-203ENST00000376061 MROH1Q8NDA8 1641 aa15.43■□□□□ 0.06
PDPN-203ENST00000376061 MYT1LQ9UL68 1186 aa15.43■□□□□ 0.06
PDPN-203ENST00000376061 CLSPNQ9HAW4 1339 aa15.43■□□□□ 0.06
PDPN-203ENST00000376061 DHX29Q7Z478 1369 aaKnown RBP15.43■□□□□ 0.06
PDPN-203ENST00000376061 TRIM52Q96A61 297 aa15.42■□□□□ 0.06
PDPN-203ENST00000376061 PRDM15P57071 1507 aaPredicted RBP15.42■□□□□ 0.06
PDPN-203ENST00000376061 FAM135AQ9P2D6 1515 aa15.41■□□□□ 0.06
PDPN-203ENST00000376061 REREQ9P2R6 1566 aa15.41■□□□□ 0.06
PDPN-203ENST00000376061 VWDEQ8N2E2 1590 aa15.39■□□□□ 0.05
PDPN-203ENST00000376061 NUP155O75694 1391 aa15.38■□□□□ 0.05
PDPN-203ENST00000376061 MPHOSPH9Q99550 1183 aa15.37■□□□□ 0.05
PDPN-203ENST00000376061 SIGLEC1Q9BZZ2 1709 aa15.37■□□□□ 0.05
PDPN-203ENST00000376061 SLC24A1O60721 1099 aa15.36■□□□□ 0.05
PDPN-203ENST00000376061 ZEB1P37275 1124 aaPredicted RBP15.36■□□□□ 0.05
PDPN-203ENST00000376061 TET3O43151 1660 aa15.36■□□□□ 0.05
PDPN-203ENST00000376061 ATP10AO60312 1499 aa15.36■□□□□ 0.05
PDPN-203ENST00000376061 CEP152O94986 1710 aa15.35■□□□□ 0.05
PDPN-203ENST00000376061 SLC4A1APQ9BWU0 796 aaKnown RBP15.35■□□□□ 0.05
PDPN-203ENST00000376061 KIF3BO15066 747 aa15.33■□□□□ 0.04
PDPN-203ENST00000376061 AGLP35573 1532 aa15.33■□□□□ 0.04
PDPN-203ENST00000376061 E9PCH4 1651 aa15.32■□□□□ 0.04
PDPN-203ENST00000376061 ZC3H13Q5T200 1668 aaKnown RBP15.32■□□□□ 0.04
PDPN-203ENST00000376061 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.31■□□□□ 0.04
PDPN-203ENST00000376061 EFCAB6Q5THR3 1501 aa15.3■□□□□ 0.04
PDPN-203ENST00000376061 LMTK2Q8IWU2 1503 aa15.3■□□□□ 0.04
PDPN-203ENST00000376061 KANK1Q14678 1352 aa15.3■□□□□ 0.04
PDPN-203ENST00000376061 ANKRD30BQ9BXX2 1392 aa15.3■□□□□ 0.04
PDPN-203ENST00000376061 PKD2Q13563 968 aa15.29■□□□□ 0.04
PDPN-203ENST00000376061 ABCC3O15438 1527 aa15.29■□□□□ 0.04
PDPN-203ENST00000376061 CAMSAP1Q5T5Y3 1602 aa15.29■□□□□ 0.04
PDPN-203ENST00000376061 SPHKAPQ2M3C7 1700 aa15.28■□□□□ 0.04
PDPN-203ENST00000376061 SIN3AQ96ST3 1273 aa15.26■□□□□ 0.03
PDPN-203ENST00000376061 RPRD2Q5VT52 1461 aaKnown RBP15.25■□□□□ 0.03
PDPN-203ENST00000376061 NCBP3Q53F19 620 aaKnown RBP15.24■□□□□ 0.03
PDPN-203ENST00000376061 PLA2R1Q13018 1463 aa15.23■□□□□ 0.03
PDPN-203ENST00000376061 TRPM2O94759 1503 aa15.23■□□□□ 0.03
PDPN-203ENST00000376061 CLTCQ00610 1675 aaKnown RBP15.22■□□□□ 0.03
PDPN-203ENST00000376061 GGT6Q6P531 493 aa15.22■□□□□ 0.03
PDPN-203ENST00000376061 NEUROD1Q13562 356 aa15.21■□□□□ 0.02
PDPN-203ENST00000376061 CLTCL1P53675 1640 aa15.19■□□□□ 0.02
PDPN-203ENST00000376061 PTPRTO14522 1441 aa15.19■□□□□ 0.02
PDPN-203ENST00000376061 NPATQ14207 1427 aa15.18■□□□□ 0.02
PDPN-203ENST00000376061 TONSLQ96HA7 1378 aa15.18■□□□□ 0.02
PDPN-203ENST00000376061 WASHC2CQ9Y4E1 1318 aa15.17■□□□□ 0.02
PDPN-203ENST00000376061 PREX1Q8TCU6 1659 aa15.17■□□□□ 0.02
PDPN-203ENST00000376061 CCDC144AA2RUR9 1427 aa15.17■□□□□ 0.02
PDPN-203ENST00000376061 ARHGAP31Q2M1Z3 1444 aa15.17■□□□□ 0.02
PDPN-203ENST00000376061 CFAP65Q6ZU64 1925 aaKnown RBP15.16■□□□□ 0.02
PDPN-203ENST00000376061 MROH2AA6NES4 1674 aa15.15■□□□□ 0.02
PDPN-203ENST00000376061 TIMELESSQ9UNS1 1208 aa15.15■□□□□ 0.02
PDPN-203ENST00000376061 SYNMO15061 1565 aa15.15■□□□□ 0.02
PDPN-203ENST00000376061 UGGT1Q9NYU2 1555 aa15.14■□□□□ 0.01
PDPN-203ENST00000376061 FER1L4A9Z1Z3 1794 aa15.14■□□□□ 0.01
PDPN-203ENST00000376061 PIK3C2BO00750 1634 aa15.13■□□□□ 0.01
PDPN-203ENST00000376061 KIF1BO60333 1816 aa15.12■□□□□ 0.01
PDPN-203ENST00000376061 NOS1P29475 1434 aa15.12■□□□□ 0.01
PDPN-203ENST00000376061 CNTLNQ9NXG0 1405 aa15.12■□□□□ 0.01
PDPN-203ENST00000376061 ARID4BQ4LE39 1312 aaPredicted RBP15.11■□□□□ 0.01
PDPN-203ENST00000376061 MLECQ14165 292 aa15.11■□□□□ 0.01
PDPN-203ENST00000376061 NEURL4Q96JN8 1562 aa15.1■□□□□ 0.01
PDPN-203ENST00000376061 ERVK-7P63135 1459 aa15.1■□□□□ 0.01
PDPN-203ENST00000376061 SPATA31E1Q6ZUB1 1445 aa15.09■□□□□ 0.01
PDPN-203ENST00000376061 SPATA31D1Q6ZQQ2 1576 aa15.09■□□□□ 0.01
PDPN-203ENST00000376061 ADGRB3O60242 1522 aa15.08■□□□□ 0
PDPN-203ENST00000376061 L3MBTL2Q969R5 705 aa15.08■□□□□ 0
PDPN-203ENST00000376061 POTEHQ6S545 545 aa15.07■□□□□ 0
PDPN-203ENST00000376061 IFT172Q9UG01 1749 aa15.06■□□□□ 0
PDPN-203ENST00000376061 C3P01024 1663 aa15.06■□□□□ 0
PDPN-203ENST00000376061 MADDQ8WXG6 1647 aa15.06■□□□□ 0
PDPN-203ENST00000376061 PPP1R15AO75807 674 aaPredicted RBP15.06■□□□□ 0
PDPN-203ENST00000376061 ADAMTSL3P82987 1691 aa15.06■□□□□ 0
PDPN-203ENST00000376061 RIMS1Q86UR5 1692 aaKnown RBP15.04■□□□□ -0
PDPN-203ENST00000376061 MYO5BQ9ULV0 1848 aa15.04■□□□□ -0
PDPN-203ENST00000376061 ESF1Q9H501 851 aaKnown RBP15.02■□□□□ -0
PDPN-203ENST00000376061 ZMYM3Q14202 1370 aa15.02■□□□□ -0
PDPN-203ENST00000376061 PPLO60437 1756 aa15.01□□□□□ -0.01
PDPN-203ENST00000376061 TMEM131LA2VDJ0 1609 aa15.01□□□□□ -0.01
PDPN-203ENST00000376061 UHRF1BP1Q6BDS2 1440 aa15.01□□□□□ -0.01
PDPN-203ENST00000376061 FBXO31Q5XUX0 539 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms