RNA–Protein interactions for RNA: ENST00000375779.6

CLIC1-206, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIC1, Length 1,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-206ENST00000375779 ZNF142P52746 1687 aaPredicted RBP23.09■■□□□ 1.29
CLIC1-206ENST00000375779 PLA2R1Q13018 1463 aa23.08■■□□□ 1.29
CLIC1-206ENST00000375779 CAMSAP1Q5T5Y3 1602 aa23.08■■□□□ 1.28
CLIC1-206ENST00000375779 TCOF1Q13428 1488 aaKnown RBP23.05■■□□□ 1.28
CLIC1-206ENST00000375779 LTBP4Q8N2S1 1624 aa23.05■■□□□ 1.28
CLIC1-206ENST00000375779 PKD2Q13563 968 aa23.05■■□□□ 1.28
CLIC1-206ENST00000375779 WASHC2CQ9Y4E1 1318 aa23.05■■□□□ 1.28
CLIC1-206ENST00000375779 PZPP20742 1482 aa23.05■■□□□ 1.28
CLIC1-206ENST00000375779 MYO3AQ8NEV4 1616 aa23.04■■□□□ 1.28
CLIC1-206ENST00000375779 KDM5DQ9BY66 1539 aa23.04■■□□□ 1.28
CLIC1-206ENST00000375779 FBXO31Q5XUX0 539 aaPredicted RBP23.04■■□□□ 1.28
CLIC1-206ENST00000375779 CEP170BQ9Y4F5 1589 aaPredicted RBP23.04■■□□□ 1.28
CLIC1-206ENST00000375779 A2ML1A8K2U0 1454 aa23.03■■□□□ 1.28
CLIC1-206ENST00000375779 RNF17Q9BXT8 1623 aaKnown RBP23.01■■□□□ 1.27
CLIC1-206ENST00000375779 NCKAP5LQ9HCH0 1330 aa23.01■■□□□ 1.27
CLIC1-206ENST00000375779 DNMT1P26358 1616 aaKnown RBP23■■□□□ 1.27
CLIC1-206ENST00000375779 ABCC5O15440 1437 aa22.99■■□□□ 1.27
CLIC1-206ENST00000375779 EIF2AK4Q9P2K8 1649 aaKnown RBP22.99■■□□□ 1.27
CLIC1-206ENST00000375779 APLP2Q06481 763 aa22.98■■□□□ 1.27
CLIC1-206ENST00000375779 TNRQ92752 1358 aa22.98■■□□□ 1.27
CLIC1-206ENST00000375779 IQSEC2Q5JU85 1478 aa22.97■■□□□ 1.27
CLIC1-206ENST00000375779 SHANK2Q9UPX8 1470 aa22.97■■□□□ 1.27
CLIC1-206ENST00000375779 DUOX2Q9NRD8 1548 aa22.96■■□□□ 1.27
CLIC1-206ENST00000375779 MROH1Q8NDA8 1641 aa22.96■■□□□ 1.27
CLIC1-206ENST00000375779 PTPN23Q9H3S7 1636 aa22.94■■□□□ 1.26
CLIC1-206ENST00000375779 FGD6Q6ZV73 1430 aa22.94■■□□□ 1.26
CLIC1-206ENST00000375779 ABCC3O15438 1527 aa22.93■■□□□ 1.26
CLIC1-206ENST00000375779 NLRP1Q9C000 1473 aa22.93■■□□□ 1.26
CLIC1-206ENST00000375779 DAPK1P53355 1430 aa22.91■■□□□ 1.26
CLIC1-206ENST00000375779 ZC3H13Q5T200 1668 aaKnown RBP22.9■■□□□ 1.26
CLIC1-206ENST00000375779 SPATA31D1Q6ZQQ2 1576 aa22.9■■□□□ 1.26
CLIC1-206ENST00000375779 THEMISQ8N1K5 641 aaPredicted RBP22.9■■□□□ 1.26
CLIC1-206ENST00000375779 CROCC2H7BZ55 1655 aa22.89■■□□□ 1.25
CLIC1-206ENST00000375779 ARHGAP31Q2M1Z3 1444 aa22.89■■□□□ 1.25
CLIC1-206ENST00000375779 ERBINQ96RT1 1412 aa22.89■■□□□ 1.25
CLIC1-206ENST00000375779 KIF15Q9NS87 1388 aa22.89■■□□□ 1.25
CLIC1-206ENST00000375779 ZNF335Q9H4Z2 1342 aaPredicted RBP22.87■■□□□ 1.25
CLIC1-206ENST00000375779 RRP7BPQ9NSQ0 103 aa22.86■■□□□ 1.25
CLIC1-206ENST00000375779 MED14O60244 1454 aa22.85■■□□□ 1.25
CLIC1-206ENST00000375779 NEURL4Q96JN8 1562 aa22.84■■□□□ 1.25
CLIC1-206ENST00000375779 PRDM15P57071 1507 aaPredicted RBP22.84■■□□□ 1.25
CLIC1-206ENST00000375779 ANKLE2Q86XL3 938 aa22.84■■□□□ 1.25
CLIC1-206ENST00000375779 ERVK-7P63135 1459 aa22.84■■□□□ 1.25
CLIC1-206ENST00000375779 UGGT1Q9NYU2 1555 aa22.84■■□□□ 1.25
CLIC1-206ENST00000375779 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.83■■□□□ 1.252e-12■■■□□ 15.8
CLIC1-206ENST00000375779 DEPDC5O75140 1603 aa22.82■■□□□ 1.24
CLIC1-206ENST00000375779 ADGRL2O95490 1459 aa22.8■■□□□ 1.24
CLIC1-206ENST00000375779 ANKRD30AQ9BXX3 1397 aa22.8■■□□□ 1.24
CLIC1-206ENST00000375779 FOXD1Q16676 465 aa22.8■■□□□ 1.24
CLIC1-206ENST00000375779 VWDEQ8N2E2 1590 aa22.8■■□□□ 1.24
CLIC1-206ENST00000375779 POLR1AO95602 1720 aaPredicted RBP22.79■■□□□ 1.24
CLIC1-206ENST00000375779 CEP152O94986 1710 aa22.79■■□□□ 1.24
CLIC1-206ENST00000375779 CFAP65Q6ZU64 1925 aaKnown RBP22.78■■□□□ 1.24
CLIC1-206ENST00000375779 LMTK2Q8IWU2 1503 aa22.77■■□□□ 1.24
CLIC1-206ENST00000375779 CHIC2Q9UKJ5 165 aa22.76■■□□□ 1.23
CLIC1-206ENST00000375779 NPHP4O75161 1426 aaPredicted RBP22.73■■□□□ 1.23
CLIC1-206ENST00000375779 ARHGAP23Q9P227 1491 aa22.73■■□□□ 1.23
CLIC1-206ENST00000375779 UBR1Q8IWV7 1749 aa22.71■■□□□ 1.23
CLIC1-206ENST00000375779 KANK1Q14678 1352 aa22.7■■□□□ 1.22
CLIC1-206ENST00000375779 SLIT1O75093 1534 aa22.7■■□□□ 1.22
CLIC1-206ENST00000375779 CPS1P31327 1500 aa22.7■■□□□ 1.22
CLIC1-206ENST00000375779 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.69■■□□□ 1.222e-10■□□□□ 10.7
CLIC1-206ENST00000375779 NOS1P29475 1434 aa22.68■■□□□ 1.22
CLIC1-206ENST00000375779 LTKP29376 864 aa22.68■■□□□ 1.22
CLIC1-206ENST00000375779 IDI1Q13907 227 aa22.66■■□□□ 1.22
CLIC1-206ENST00000375779 FAM50AQ14320 339 aaKnown RBP22.66■■□□□ 1.22
CLIC1-206ENST00000375779 ANKRD50Q9ULJ7 1429 aa22.65■■□□□ 1.22
CLIC1-206ENST00000375779 KDM5AP29375 1690 aaKnown RBP22.65■■□□□ 1.22
CLIC1-206ENST00000375779 UBAP1LF5GYI3 381 aa22.65■■□□□ 1.22
CLIC1-206ENST00000375779 IQGAP1P46940 1657 aa22.65■■□□□ 1.22
CLIC1-206ENST00000375779 ROCK1Q13464 1354 aa22.63■■□□□ 1.21
CLIC1-206ENST00000375779 TMEM2Q9UHN6 1383 aa22.62■■□□□ 1.21
CLIC1-206ENST00000375779 SCAF11Q99590 1463 aaKnown RBP22.61■■□□□ 1.21
CLIC1-206ENST00000375779 TXNDC2Q86VQ3 553 aa22.61■■□□□ 1.21
CLIC1-206ENST00000375779 SLC52A1Q9NWF4 448 aa22.61■■□□□ 1.21
CLIC1-206ENST00000375779 EFCAB6Q5THR3 1501 aa22.6■■□□□ 1.21
CLIC1-206ENST00000375779 STRCP1A6NGW2 1772 aa22.6■■□□□ 1.21
CLIC1-206ENST00000375779 PIK3C2BO00750 1634 aa22.6■■□□□ 1.21
CLIC1-206ENST00000375779 RPRD2Q5VT52 1461 aaKnown RBP22.6■■□□□ 1.21
CLIC1-206ENST00000375779 SYNMO15061 1565 aa22.59■■□□□ 1.21
CLIC1-206ENST00000375779 TOM1O60784 492 aa22.56■■□□□ 1.2
CLIC1-206ENST00000375779 ALKQ9UM73 1620 aa22.56■■□□□ 1.2
CLIC1-206ENST00000375779 EID1Q9Y6B2 187 aa22.55■■□□□ 1.2
CLIC1-206ENST00000375779 LRRC7Q96NW7 1537 aa22.55■■□□□ 1.2
CLIC1-206ENST00000375779 TET3O43151 1660 aa22.54■■□□□ 1.2
CLIC1-206ENST00000375779 UNC13BO14795 1591 aa22.52■■□□□ 1.2
CLIC1-206ENST00000375779 STAG3Q9UJ98 1225 aa22.48■■□□□ 1.19
CLIC1-206ENST00000375779 ADGRB3O60242 1522 aa22.47■■□□□ 1.19
CLIC1-206ENST00000375779 GCC2Q8IWJ2 1684 aa22.46■■□□□ 1.19
CLIC1-206ENST00000375779 DISP3Q9P2K9 1392 aa22.46■■□□□ 1.19
CLIC1-206ENST00000375779 ZFYVE9O95405 1425 aa22.46■■□□□ 1.19
CLIC1-206ENST00000375779 ILDR2Q71H61 639 aa22.45■■□□□ 1.18
CLIC1-206ENST00000375779 KCNA6P17658 529 aa22.44■■□□□ 1.18
CLIC1-206ENST00000375779 HSPA1LP34931 641 aa22.44■■□□□ 1.18
CLIC1-206ENST00000375779 IQGAP3Q86VI3 1631 aa22.44■■□□□ 1.18
CLIC1-206ENST00000375779 RRBP1Q9P2E9 1410 aaKnown RBP22.44■■□□□ 1.18
CLIC1-206ENST00000375779 XIRP1Q702N8 1843 aaKnown RBP22.43■■□□□ 1.18
CLIC1-206ENST00000375779 TMEM131LA2VDJ0 1609 aa22.42■■□□□ 1.18
CLIC1-206ENST00000375779 E9PCH4 1651 aa22.42■■□□□ 1.18
CLIC1-206ENST00000375779 PIP4K2BP78356 416 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms