RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 KIF7Q2M1P5 1343 aa20.78■□□□□ 0.92
MSH5-203ENST00000375750 ERICH6Q7L0X2 663 aa20.78■□□□□ 0.92
MSH5-203ENST00000375750 ABCC1P33527 1531 aa20.76■□□□□ 0.91
MSH5-203ENST00000375750 CYB5RLQ6IPT4 315 aa20.75■□□□□ 0.91
MSH5-203ENST00000375750 MAST1Q9Y2H9 1570 aa20.74■□□□□ 0.91
MSH5-203ENST00000375750 FANCAO15360 1455 aa20.74■□□□□ 0.91
MSH5-203ENST00000375750 ZNF326Q5BKZ1 582 aaKnown RBP20.74■□□□□ 0.91
MSH5-203ENST00000375750 ABCA9Q8IUA7 1624 aa20.73■□□□□ 0.91
MSH5-203ENST00000375750 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.73■□□□□ 0.914e-7■■□□□ 12.9
MSH5-203ENST00000375750 RPRD2Q5VT52 1461 aaKnown RBP20.72■□□□□ 0.91
MSH5-203ENST00000375750 ZBED9Q6R2W3 1325 aa20.72■□□□□ 0.91
MSH5-203ENST00000375750 ARAP3Q8WWN8 1544 aa20.71■□□□□ 0.91
MSH5-203ENST00000375750 SPAG9O60271 1321 aaKnown RBP20.7■□□□□ 0.91
MSH5-203ENST00000375750 SCAPERQ9BY12 1400 aa20.67■□□□□ 0.9
MSH5-203ENST00000375750 PLXNC1O60486 1568 aa20.67■□□□□ 0.9
MSH5-203ENST00000375750 TEX14Q8IWB6 1497 aa20.66■□□□□ 0.9
MSH5-203ENST00000375750 KDM5DQ9BY66 1539 aa20.66■□□□□ 0.9
MSH5-203ENST00000375750 ERICH6BQ5W0A0 696 aa20.66■□□□□ 0.9
MSH5-203ENST00000375750 MYT1LQ9UL68 1186 aa20.66■□□□□ 0.9
MSH5-203ENST00000375750 ADGRL1O94910 1474 aa20.65■□□□□ 0.9
MSH5-203ENST00000375750 SPATA31E1Q6ZUB1 1445 aa20.65■□□□□ 0.9
MSH5-203ENST00000375750 DUOX2Q9NRD8 1548 aa20.64■□□□□ 0.89
MSH5-203ENST00000375750 CD109Q6YHK3 1445 aa20.64■□□□□ 0.89
MSH5-203ENST00000375750 FAM135AQ9P2D6 1515 aa20.64■□□□□ 0.89
MSH5-203ENST00000375750 RTEL1-TNFRSF6BF6WH68 1400 aa20.6■□□□□ 0.89
MSH5-203ENST00000375750 ERBINQ96RT1 1412 aa20.6■□□□□ 0.89
MSH5-203ENST00000375750 PAK3O75914 559 aaPredicted RBP20.59■□□□□ 0.89
MSH5-203ENST00000375750 ZFYVE16Q7Z3T8 1539 aa20.59■□□□□ 0.89
MSH5-203ENST00000375750 RIMBP3CA6NJZ7 1639 aa20.59■□□□□ 0.89
MSH5-203ENST00000375750 RIMBP3BA6NNM3 1639 aa20.59■□□□□ 0.89
MSH5-203ENST00000375750 RIMBP3Q9UFD9 1639 aa20.59■□□□□ 0.89
MSH5-203ENST00000375750 DHX29Q7Z478 1369 aaKnown RBP20.58■□□□□ 0.88
MSH5-203ENST00000375750 UNC13BO14795 1591 aa20.57■□□□□ 0.88
MSH5-203ENST00000375750 NBR1Q14596 966 aa20.56■□□□□ 0.88
MSH5-203ENST00000375750 ATP7AQ04656 1500 aa20.54■□□□□ 0.88
MSH5-203ENST00000375750 USP47Q96K76 1375 aa20.53■□□□□ 0.88
MSH5-203ENST00000375750 BCORL1Q5H9F3 1711 aa20.53■□□□□ 0.88
MSH5-203ENST00000375750 NUDCQ9Y266 331 aa20.52■□□□□ 0.88
MSH5-203ENST00000375750 CCDC136Q96JN2 1154 aa20.51■□□□□ 0.87
MSH5-203ENST00000375750 INO80Q9ULG1 1556 aaPredicted RBP20.51■□□□□ 0.87
MSH5-203ENST00000375750 KIF3BO15066 747 aa20.51■□□□□ 0.87
MSH5-203ENST00000375750 KDM2AQ9Y2K7 1162 aa20.51■□□□□ 0.87
MSH5-203ENST00000375750 SMG6Q86US8 1419 aaKnown RBP20.51■□□□□ 0.87
MSH5-203ENST00000375750 IQGAP3Q86VI3 1631 aa20.51■□□□□ 0.87
MSH5-203ENST00000375750 PLA2R1Q13018 1463 aa20.5■□□□□ 0.87
MSH5-203ENST00000375750 MAGI2Q86UL8 1455 aa20.5■□□□□ 0.87
MSH5-203ENST00000375750 DEKP35659 375 aaKnown RBP20.49■□□□□ 0.87
MSH5-203ENST00000375750 NOP58Q9Y2X3 529 aaKnown RBP20.49■□□□□ 0.87
MSH5-203ENST00000375750 SALL2Q9Y467 1007 aaPredicted RBP20.49■□□□□ 0.87
MSH5-203ENST00000375750 ZNF518AQ6AHZ1 1483 aa20.49■□□□□ 0.87
MSH5-203ENST00000375750 RAPGEF3O95398 923 aa20.48■□□□□ 0.87
MSH5-203ENST00000375750 DCAF11Q8TEB1 546 aa20.48■□□□□ 0.87
MSH5-203ENST00000375750 RGL3Q3MIN7 710 aa20.47■□□□□ 0.87
MSH5-203ENST00000375750 CCDC144AA2RUR9 1427 aa20.47■□□□□ 0.87
MSH5-203ENST00000375750 PNISRQ8TF01 805 aaKnown RBP20.46■□□□□ 0.87
MSH5-203ENST00000375750 TMC1Q8TDI8 760 aa20.46■□□□□ 0.87
MSH5-203ENST00000375750 POGZQ7Z3K3 1410 aa20.45■□□□□ 0.86
MSH5-203ENST00000375750 FAM69CQ0P6D2 419 aa20.45■□□□□ 0.86
MSH5-203ENST00000375750 KIDINS220Q9ULH0 1771 aa20.45■□□□□ 0.86
MSH5-203ENST00000375750 POLR1AO95602 1720 aaPredicted RBP20.43■□□□□ 0.86
MSH5-203ENST00000375750 CFAP74Q9C0B2 1584 aa20.43■□□□□ 0.86
MSH5-203ENST00000375750 CARD11Q9BXL7 1154 aa20.42■□□□□ 0.86
MSH5-203ENST00000375750 RNF123Q5XPI4 1314 aa20.42■□□□□ 0.86
MSH5-203ENST00000375750 NEO1Q92859 1461 aa20.4■□□□□ 0.86
MSH5-203ENST00000375750 ST20-MTHFSA0A0A6YYL1 179 aa20.4■□□□□ 0.86
MSH5-203ENST00000375750 KDM5CP41229 1560 aa20.38■□□□□ 0.85
MSH5-203ENST00000375750 KANK1Q14678 1352 aa20.38■□□□□ 0.85
MSH5-203ENST00000375750 DEPDC5O75140 1603 aa20.38■□□□□ 0.85
MSH5-203ENST00000375750 A2MP01023 1474 aa20.37■□□□□ 0.85
MSH5-203ENST00000375750 MAP3K4Q9Y6R4 1608 aa20.37■□□□□ 0.85
MSH5-203ENST00000375750 MLH3Q9UHC1 1453 aa20.37■□□□□ 0.85
MSH5-203ENST00000375750 UHRF1BP1Q6BDS2 1440 aa20.37■□□□□ 0.85
MSH5-203ENST00000375750 EXOC6Q8TAG9 804 aa20.36■□□□□ 0.85
MSH5-203ENST00000375750 E9PCH4 1651 aa20.36■□□□□ 0.85
MSH5-203ENST00000375750 ATP10AO60312 1499 aa20.35■□□□□ 0.85
MSH5-203ENST00000375750 GGT6Q6P531 493 aa20.35■□□□□ 0.85
MSH5-203ENST00000375750 NPM2Q86SE8 214 aaKnown RBP20.34■□□□□ 0.85
MSH5-203ENST00000375750 GLI2P10070 1586 aa20.33■□□□□ 0.85
MSH5-203ENST00000375750 HECW2Q9P2P5 1572 aa20.33■□□□□ 0.85
MSH5-203ENST00000375750 MROH1Q8NDA8 1641 aa20.33■□□□□ 0.84
MSH5-203ENST00000375750 IPO9Q96P70 1041 aaKnown RBP20.33■□□□□ 0.84
MSH5-203ENST00000375750 EIF2AK4Q9P2K8 1649 aaKnown RBP20.32■□□□□ 0.84
MSH5-203ENST00000375750 ANP32AP39687 249 aaKnown RBP20.32■□□□□ 0.84
MSH5-203ENST00000375750 VWDEQ8N2E2 1590 aa20.32■□□□□ 0.84
MSH5-203ENST00000375750 DIP2BQ9P265 1576 aa20.31■□□□□ 0.84
MSH5-203ENST00000375750 FRMPD1Q5SYB0 1578 aa20.31■□□□□ 0.84
MSH5-203ENST00000375750 PRDM15P57071 1507 aaPredicted RBP20.31■□□□□ 0.84
MSH5-203ENST00000375750 RALGAPBQ86X10 1494 aa20.3■□□□□ 0.84
MSH5-203ENST00000375750 SKAP1Q86WV1 359 aa20.29■□□□□ 0.84
MSH5-203ENST00000375750 ABCA6Q8N139 1617 aa20.29■□□□□ 0.84
MSH5-203ENST00000375750 TET3O43151 1660 aa20.29■□□□□ 0.84
MSH5-203ENST00000375750 PTPRTO14522 1441 aa20.28■□□□□ 0.84
MSH5-203ENST00000375750 RRP1P56182 461 aaKnown RBP20.28■□□□□ 0.84
MSH5-203ENST00000375750 NBPF1Q3BBV0 1214 aa20.28■□□□□ 0.84
MSH5-203ENST00000375750 ZBTB47Q9UFB7 747 aaPredicted RBP20.28■□□□□ 0.84
MSH5-203ENST00000375750 PRAG1Q86YV5 1406 aa20.28■□□□□ 0.84
MSH5-203ENST00000375750 CDCA7LQ96GN5 454 aa20.28■□□□□ 0.84
MSH5-203ENST00000375750 TSPOAP1O95153 1857 aa20.27■□□□□ 0.84
MSH5-203ENST00000375750 ROCK2O75116 1388 aaKnown RBP20.27■□□□□ 0.84
MSH5-203ENST00000375750 MYBBP1AQ9BQG0 1328 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms