RNA–Protein interactions for RNA: ENST00000375440.8

CUL4A-202, Transcript of cullin 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL4A, Length 2,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-202ENST00000375440 SPAG9O60271 1321 aaKnown RBP36.69■■■■□ 3.46
CUL4A-202ENST00000375440 USP47Q96K76 1375 aa36.68■■■■□ 3.46
CUL4A-202ENST00000375440 KDM5CP41229 1560 aa36.68■■■■□ 3.46
CUL4A-202ENST00000375440 CCDC144AA2RUR9 1427 aa36.67■■■■□ 3.46
CUL4A-202ENST00000375440 KIF7Q2M1P5 1343 aa36.67■■■■□ 3.46
CUL4A-202ENST00000375440 DCAF11Q8TEB1 546 aa36.62■■■■□ 3.45
CUL4A-202ENST00000375440 BCORL1Q5H9F3 1711 aa36.61■■■■□ 3.45
CUL4A-202ENST00000375440 KDM2AQ9Y2K7 1162 aa36.61■■■■□ 3.45
CUL4A-202ENST00000375440 ATP10AO60312 1499 aa36.59■■■■□ 3.45
CUL4A-202ENST00000375440 INO80Q9ULG1 1556 aaPredicted RBP36.59■■■■□ 3.45
CUL4A-202ENST00000375440 ADGRL1O94910 1474 aa36.56■■■■□ 3.44
CUL4A-202ENST00000375440 ATP7AQ04656 1500 aa36.56■■■■□ 3.44
CUL4A-202ENST00000375440 SCAPERQ9BY12 1400 aa36.53■■■■□ 3.44
CUL4A-202ENST00000375440 CARD11Q9BXL7 1154 aa36.52■■■■□ 3.44
CUL4A-202ENST00000375440 DEPDC5O75140 1603 aa36.5■■■■□ 3.43
CUL4A-202ENST00000375440 NPM1P06748 294 aaKnown RBP eCLIP36.49■■■■□ 3.43
CUL4A-202ENST00000375440 PRAG1Q86YV5 1406 aa36.49■■■■□ 3.43
CUL4A-202ENST00000375440 A2MP01023 1474 aa36.49■■■■□ 3.43
CUL4A-202ENST00000375440 TRPM1Q7Z4N2 1603 aa36.46■■■■□ 3.43
CUL4A-202ENST00000375440 E9PCH4 1651 aa36.46■■■■□ 3.43
CUL4A-202ENST00000375440 RGL3Q3MIN7 710 aa36.46■■■■□ 3.43
CUL4A-202ENST00000375440 PRKRIP1Q9H875 184 aaPredicted RBP36.44■■■■□ 3.42
CUL4A-202ENST00000375440 ARID4BQ4LE39 1312 aaPredicted RBP36.43■■■■□ 3.42
CUL4A-202ENST00000375440 ROCK2O75116 1388 aaKnown RBP36.41■■■■□ 3.42
CUL4A-202ENST00000375440 VWDEQ8N2E2 1590 aa36.37■■■■□ 3.41
CUL4A-202ENST00000375440 EIF2AK4Q9P2K8 1649 aaKnown RBP36.36■■■■□ 3.41
CUL4A-202ENST00000375440 KIDINS220Q9ULH0 1771 aa36.36■■■■□ 3.41
CUL4A-202ENST00000375440 ST20-MTHFSA0A0A6YYL1 179 aa36.35■■■■□ 3.41
CUL4A-202ENST00000375440 DHX29Q7Z478 1369 aaKnown RBP36.35■■■■□ 3.41
CUL4A-202ENST00000375440 TET3O43151 1660 aa36.35■■■■□ 3.41
CUL4A-202ENST00000375440 CD109Q6YHK3 1445 aa36.33■■■■□ 3.41
CUL4A-202ENST00000375440 TRPM2O94759 1503 aa36.33■■■■□ 3.41
CUL4A-202ENST00000375440 GPRASP1Q5JY77 1395 aa36.32■■■■□ 3.41
CUL4A-202ENST00000375440 CCDC184Q52MB2 194 aa36.32■■■■□ 3.4
CUL4A-202ENST00000375440 MYT1LQ9UL68 1186 aa36.32■■■■□ 3.4
CUL4A-202ENST00000375440 ZNF518AQ6AHZ1 1483 aa36.32■■■■□ 3.4
CUL4A-202ENST00000375440 PTPRTO14522 1441 aa36.31■■■■□ 3.4
CUL4A-202ENST00000375440 SPHKAPQ2M3C7 1700 aa36.31■■■■□ 3.4
CUL4A-202ENST00000375440 MROH1Q8NDA8 1641 aa36.3■■■■□ 3.4
CUL4A-202ENST00000375440 PRDM15P57071 1507 aaPredicted RBP36.3■■■■□ 3.4
CUL4A-202ENST00000375440 CFAP74Q9C0B2 1584 aa36.3■■■■□ 3.4
CUL4A-202ENST00000375440 KIF3BO15066 747 aa36.3■■■■□ 3.4
CUL4A-202ENST00000375440 NBPF1Q3BBV0 1214 aa36.29■■■■□ 3.4
CUL4A-202ENST00000375440 POLR3GLQ9BT43 218 aa36.29■■■■□ 3.4
CUL4A-202ENST00000375440 LAMC1P11047 1609 aa36.28■■■■□ 3.4
CUL4A-202ENST00000375440 KANK1Q14678 1352 aa36.28■■■■□ 3.4
CUL4A-202ENST00000375440 SUPT16HQ9Y5B9 1047 aaKnown RBP36.26■■■■□ 3.4
CUL4A-202ENST00000375440 CEP152O94986 1710 aa36.24■■■■□ 3.39
CUL4A-202ENST00000375440 CLTCL1P53675 1640 aa36.22■■■■□ 3.39
CUL4A-202ENST00000375440 POGZQ7Z3K3 1410 aa36.22■■■■□ 3.39
CUL4A-202ENST00000375440 HNRNPUQ00839 825 aaKnown RBP eCLIP36.17■■■■□ 3.38
CUL4A-202ENST00000375440 MRS2Q9HD23 443 aa36.17■■■■□ 3.38
CUL4A-202ENST00000375440 RNF17Q9BXT8 1623 aaKnown RBP36.15■■■■□ 3.38
CUL4A-202ENST00000375440 MLH3Q9UHC1 1453 aa36.14■■■■□ 3.38
CUL4A-202ENST00000375440 MADDQ8WXG6 1647 aa36.14■■■■□ 3.38
CUL4A-202ENST00000375440 HECW2Q9P2P5 1572 aa36.11■■■■□ 3.37
CUL4A-202ENST00000375440 EFCAB6Q5THR3 1501 aa36.11■■■■□ 3.37
CUL4A-202ENST00000375440 FRMPD1Q5SYB0 1578 aa36.09■■■■□ 3.37
CUL4A-202ENST00000375440 NEO1Q92859 1461 aa36.08■■■■□ 3.37
CUL4A-202ENST00000375440 LMTK2Q8IWU2 1503 aa36.07■■■■□ 3.37
CUL4A-202ENST00000375440 PPRC1Q5VV67 1664 aaKnown RBP36.07■■■■□ 3.36
CUL4A-202ENST00000375440 TESK2Q96S53 571 aa36.05■■■■□ 3.36
CUL4A-202ENST00000375440 NEURL4Q96JN8 1562 aa36.05■■■■□ 3.36
CUL4A-202ENST00000375440 FAM9BQ8IZU0 186 aa36.04■■■■□ 3.36
CUL4A-202ENST00000375440 STAC3Q96MF2 364 aa36.04■■■■□ 3.36
CUL4A-202ENST00000375440 COL17A1Q9UMD9 1497 aaPredicted RBP36.04■■■■□ 3.36
CUL4A-202ENST00000375440 ABCA6Q8N139 1617 aa36.02■■■■□ 3.36
CUL4A-202ENST00000375440 UGGT1Q9NYU2 1555 aa36.01■■■■□ 3.36
CUL4A-202ENST00000375440 CNGB1Q14028 1251 aaPredicted RBP35.99■■■■□ 3.35
CUL4A-202ENST00000375440 DISP3Q9P2K9 1392 aa35.98■■■■□ 3.35
CUL4A-202ENST00000375440 MAP3K4Q9Y6R4 1608 aa35.97■■■■□ 3.35
CUL4A-202ENST00000375440 IQGAP1P46940 1657 aa35.97■■■■□ 3.35
CUL4A-202ENST00000375440 CYB5RLQ6IPT4 315 aa35.95■■■■□ 3.35
CUL4A-202ENST00000375440 RAPGEF3O95398 923 aa35.95■■■■□ 3.35
CUL4A-202ENST00000375440 KIF1BO60333 1816 aa35.94■■■■□ 3.34
CUL4A-202ENST00000375440 FKBP8Q14318 412 aa35.92■■■■□ 3.34
CUL4A-202ENST00000375440 RIMBP3CA6NJZ7 1639 aa35.9■■■■□ 3.34
CUL4A-202ENST00000375440 RIMBP3BA6NNM3 1639 aa35.9■■■■□ 3.34
CUL4A-202ENST00000375440 RIMBP3Q9UFD9 1639 aa35.9■■■■□ 3.34
CUL4A-202ENST00000375440 RICTORQ6R327 1708 aa35.89■■■■□ 3.34
CUL4A-202ENST00000375440 KTN1Q86UP2 1357 aaKnown RBP35.89■■■■□ 3.34
CUL4A-202ENST00000375440 KIAA1210Q9ULL0 1709 aa35.88■■■■□ 3.33
CUL4A-202ENST00000375440 GLI2P10070 1586 aa35.88■■■■□ 3.33
CUL4A-202ENST00000375440 GGT6Q6P531 493 aa35.87■■■■□ 3.33
CUL4A-202ENST00000375440 MROH2AA6NES4 1674 aa35.87■■■■□ 3.33
CUL4A-202ENST00000375440 TMF1P82094 1093 aa35.87■■■■□ 3.33
CUL4A-202ENST00000375440 NPATQ14207 1427 aa35.87■■■■□ 3.33
CUL4A-202ENST00000375440 DIP2CQ9Y2E4 1556 aa35.87■■■■□ 3.33
CUL4A-202ENST00000375440 MYOM2P54296 1465 aa35.86■■■■□ 3.33
CUL4A-202ENST00000375440 IFT172Q9UG01 1749 aa35.86■■■■□ 3.33
CUL4A-202ENST00000375440 ZBED9Q6R2W3 1325 aa35.86■■■■□ 3.33
CUL4A-202ENST00000375440 SCAF11Q99590 1463 aaKnown RBP35.85■■■■□ 3.33
CUL4A-202ENST00000375440 PER1O15534 1290 aaPredicted RBP35.84■■■■□ 3.33
CUL4A-202ENST00000375440 RALBP1Q15311 655 aa35.83■■■■□ 3.33
CUL4A-202ENST00000375440 ABCC3O15438 1527 aa35.83■■■■□ 3.33
CUL4A-202ENST00000375440 NEFLP07196 543 aa35.82■■■■□ 3.33
CUL4A-202ENST00000375440 CFAP65Q6ZU64 1925 aaKnown RBP35.81■■■■□ 3.32
CUL4A-202ENST00000375440 MYBBP1AQ9BQG0 1328 aaKnown RBP35.8■■■■□ 3.32
CUL4A-202ENST00000375440 ADGRB3O60242 1522 aa35.79■■■■□ 3.32
CUL4A-202ENST00000375440 PELP1Q8IZL8 1130 aaKnown RBP35.78■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms