RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 CNTLNQ9NXG0 1405 aa24.24■■□□□ 1.47
HDHD3-202ENST00000374180 ROCK1Q13464 1354 aa24.23■■□□□ 1.47
HDHD3-202ENST00000374180 CEBPAP49715 358 aaPredicted RBP24.23■■□□□ 1.47
HDHD3-202ENST00000374180 WASHC2CQ9Y4E1 1318 aa24.21■■□□□ 1.47
HDHD3-202ENST00000374180 EIF2AK4Q9P2K8 1649 aaKnown RBP24.19■■□□□ 1.46
HDHD3-202ENST00000374180 ZMYM3Q14202 1370 aa24.18■■□□□ 1.46
HDHD3-202ENST00000374180 ANKRD50Q9ULJ7 1429 aa24.18■■□□□ 1.46
HDHD3-202ENST00000374180 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.17■■□□□ 1.46
HDHD3-202ENST00000374180 RNF17Q9BXT8 1623 aaKnown RBP24.14■■□□□ 1.46
HDHD3-202ENST00000374180 CLTCQ00610 1675 aaKnown RBP24.13■■□□□ 1.45
HDHD3-202ENST00000374180 KDM5DQ9BY66 1539 aa24.12■■□□□ 1.45
HDHD3-202ENST00000374180 FAM135AQ9P2D6 1515 aa24.11■■□□□ 1.45
HDHD3-202ENST00000374180 KANK1Q14678 1352 aa24.1■■□□□ 1.45
HDHD3-202ENST00000374180 MROH2AA6NES4 1674 aa24.1■■□□□ 1.45
HDHD3-202ENST00000374180 C3P01024 1663 aa24.1■■□□□ 1.45
HDHD3-202ENST00000374180 MROH1Q8NDA8 1641 aa24.08■■□□□ 1.45
HDHD3-202ENST00000374180 ABCC3O15438 1527 aa24.06■■□□□ 1.44
HDHD3-202ENST00000374180 PRDM15P57071 1507 aaPredicted RBP24.06■■□□□ 1.44
HDHD3-202ENST00000374180 DEPDC5O75140 1603 aa24.05■■□□□ 1.44
HDHD3-202ENST00000374180 NAIPQ13075 1403 aa24.04■■□□□ 1.44
HDHD3-202ENST00000374180 SETD1BQ9UPS6 1966 aaKnown RBP24.03■■□□□ 1.44
HDHD3-202ENST00000374180 FBXO31Q5XUX0 539 aaPredicted RBP24.03■■□□□ 1.44
HDHD3-202ENST00000374180 NPATQ14207 1427 aa24.03■■□□□ 1.44
HDHD3-202ENST00000374180 ZC3H13Q5T200 1668 aaKnown RBP24.02■■□□□ 1.44
HDHD3-202ENST00000374180 HFM1A2PYH4 1435 aa24.01■■□□□ 1.43
HDHD3-202ENST00000374180 PZPP20742 1482 aa24■■□□□ 1.43
HDHD3-202ENST00000374180 CEP152O94986 1710 aa23.98■■□□□ 1.43
HDHD3-202ENST00000374180 UHRF1BP1Q6BDS2 1440 aa23.98■■□□□ 1.43
HDHD3-202ENST00000374180 VWDEQ8N2E2 1590 aa23.97■■□□□ 1.43
HDHD3-202ENST00000374180 NUP155O75694 1391 aa23.97■■□□□ 1.43
HDHD3-202ENST00000374180 LMTK3Q96Q04 1460 aa23.96■■□□□ 1.43
HDHD3-202ENST00000374180 LMTK2Q8IWU2 1503 aa23.95■■□□□ 1.42
HDHD3-202ENST00000374180 ARHGAP31Q2M1Z3 1444 aa23.95■■□□□ 1.42
HDHD3-202ENST00000374180 TNRQ92752 1358 aa23.94■■□□□ 1.42
HDHD3-202ENST00000374180 CAMSAP1Q5T5Y3 1602 aa23.94■■□□□ 1.42
HDHD3-202ENST00000374180 UNC13BO14795 1591 aa23.94■■□□□ 1.42
HDHD3-202ENST00000374180 HSPA2P54652 639 aa23.94■■□□□ 1.42
HDHD3-202ENST00000374180 GCC2Q8IWJ2 1684 aa23.93■■□□□ 1.42
HDHD3-202ENST00000374180 PREX1Q8TCU6 1659 aa23.93■■□□□ 1.42
HDHD3-202ENST00000374180 TRIM52Q96A61 297 aa23.9■■□□□ 1.42
HDHD3-202ENST00000374180 ERVK-7P63135 1459 aa23.89■■□□□ 1.41
HDHD3-202ENST00000374180 CFAP65Q6ZU64 1925 aaKnown RBP23.89■■□□□ 1.41
HDHD3-202ENST00000374180 EFCAB6Q5THR3 1501 aa23.86■■□□□ 1.41
HDHD3-202ENST00000374180 SETD5Q9C0A6 1442 aa23.86■■□□□ 1.41
HDHD3-202ENST00000374180 SPATA31D1Q6ZQQ2 1576 aa23.85■■□□□ 1.41
HDHD3-202ENST00000374180 IQGAP3Q86VI3 1631 aa23.85■■□□□ 1.41
HDHD3-202ENST00000374180 TET3O43151 1660 aa23.84■■□□□ 1.41
HDHD3-202ENST00000374180 MYO3AQ8NEV4 1616 aa23.83■■□□□ 1.41
HDHD3-202ENST00000374180 RPRD2Q5VT52 1461 aaKnown RBP23.83■■□□□ 1.41
HDHD3-202ENST00000374180 NLRP1Q9C000 1473 aa23.82■■□□□ 1.4
HDHD3-202ENST00000374180 A2ML1A8K2U0 1454 aa23.81■■□□□ 1.4
HDHD3-202ENST00000374180 ACIN1Q9UKV3 1341 aaKnown RBP23.81■■□□□ 1.4
HDHD3-202ENST00000374180 CEP170BQ9Y4F5 1589 aaPredicted RBP23.81■■□□□ 1.4
HDHD3-202ENST00000374180 NOS1P29475 1434 aa23.79■■□□□ 1.4
HDHD3-202ENST00000374180 SLC4A1APQ9BWU0 796 aaKnown RBP23.79■■□□□ 1.4
HDHD3-202ENST00000374180 RAB3GAP2Q9H2M9 1393 aa23.77■■□□□ 1.4
HDHD3-202ENST00000374180 THEMISQ8N1K5 641 aaPredicted RBP23.77■■□□□ 1.4
HDHD3-202ENST00000374180 IDI1Q13907 227 aa23.76■■□□□ 1.39
HDHD3-202ENST00000374180 SLC52A1Q9NWF4 448 aa23.76■■□□□ 1.39
HDHD3-202ENST00000374180 ZNF142P52746 1687 aaPredicted RBP23.76■■□□□ 1.39
HDHD3-202ENST00000374180 PKD2Q13563 968 aa23.75■■□□□ 1.39
HDHD3-202ENST00000374180 E9PCH4 1651 aa23.75■■□□□ 1.39
HDHD3-202ENST00000374180 STAG3Q9UJ98 1225 aa23.74■■□□□ 1.39
HDHD3-202ENST00000374180 UGGT1Q9NYU2 1555 aa23.74■■□□□ 1.39
HDHD3-202ENST00000374180 TRIM26Q12899 539 aaPredicted RBP23.72■■□□□ 1.39
HDHD3-202ENST00000374180 SYNMO15061 1565 aa23.71■■□□□ 1.39
HDHD3-202ENST00000374180 HRCP23327 699 aa23.71■■□□□ 1.39
HDHD3-202ENST00000374180 MPHOSPH9Q99550 1183 aa23.71■■□□□ 1.39
HDHD3-202ENST00000374180 DMRT2Q9Y5R5 561 aa23.69■■□□□ 1.38
HDHD3-202ENST00000374180 NCKAP5LQ9HCH0 1330 aa23.69■■□□□ 1.38
HDHD3-202ENST00000374180 PLA2R1Q13018 1463 aa23.68■■□□□ 1.38
HDHD3-202ENST00000374180 ANKLE2Q86XL3 938 aa23.67■■□□□ 1.38
HDHD3-202ENST00000374180 PTPRTO14522 1441 aa23.66■■□□□ 1.38
HDHD3-202ENST00000374180 FOXD1Q16676 465 aa23.65■■□□□ 1.38
HDHD3-202ENST00000374180 STRCQ7RTU9 1775 aa23.64■■□□□ 1.38
HDHD3-202ENST00000374180 PIK3C2BO00750 1634 aa23.64■■□□□ 1.38
HDHD3-202ENST00000374180 CHGAP10645 457 aaKnown RBP23.64■■□□□ 1.38
HDHD3-202ENST00000374180 UBR1Q8IWV7 1749 aa23.63■■□□□ 1.37
HDHD3-202ENST00000374180 SPHKAPQ2M3C7 1700 aa23.6■■□□□ 1.37
HDHD3-202ENST00000374180 EID1Q9Y6B2 187 aa23.6■■□□□ 1.37
HDHD3-202ENST00000374180 TXNDC2Q86VQ3 553 aa23.59■■□□□ 1.37
HDHD3-202ENST00000374180 ADGRB3O60242 1522 aa23.58■■□□□ 1.37
HDHD3-202ENST00000374180 TMEM2Q9UHN6 1383 aa23.58■■□□□ 1.37
HDHD3-202ENST00000374180 KDM5AP29375 1690 aaKnown RBP23.57■■□□□ 1.36
HDHD3-202ENST00000374180 LTKP29376 864 aa23.56■■□□□ 1.36
HDHD3-202ENST00000374180 TRPM2O94759 1503 aa23.56■■□□□ 1.36
HDHD3-202ENST00000374180 SLIT1O75093 1534 aa23.55■■□□□ 1.36
HDHD3-202ENST00000374180 ARHGAP23Q9P227 1491 aa23.55■■□□□ 1.36
HDHD3-202ENST00000374180 HDGFP51858 240 aaKnown RBP23.54■■□□□ 1.36
HDHD3-202ENST00000374180 TMEM131LA2VDJ0 1609 aa23.53■■□□□ 1.36
HDHD3-202ENST00000374180 SCAF11Q99590 1463 aaKnown RBP23.53■■□□□ 1.36
HDHD3-202ENST00000374180 NPHP4O75161 1426 aaPredicted RBP23.5■■□□□ 1.35
HDHD3-202ENST00000374180 ZNF326Q5BKZ1 582 aaKnown RBP23.5■■□□□ 1.35
HDHD3-202ENST00000374180 CLTCL1P53675 1640 aa23.5■■□□□ 1.35
HDHD3-202ENST00000374180 MED14O60244 1454 aa23.5■■□□□ 1.35
HDHD3-202ENST00000374180 POLR1AO95602 1720 aaPredicted RBP23.5■■□□□ 1.35
HDHD3-202ENST00000374180 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.49■■□□□ 1.35
HDHD3-202ENST00000374180 NEURL4Q96JN8 1562 aa23.49■■□□□ 1.35
HDHD3-202ENST00000374180 CCDC144AA2RUR9 1427 aa23.49■■□□□ 1.35
HDHD3-202ENST00000374180 RIMS2Q9UQ26 1411 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms