RNA–Protein interactions for RNA: ENST00000373995.7

A1CF-203, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 2,211 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-203ENST00000373995 BCORL1Q5H9F3 1711 aa18.45■□□□□ 0.54
A1CF-203ENST00000373995 EIF2AK4Q9P2K8 1649 aaKnown RBP18.45■□□□□ 0.54
A1CF-203ENST00000373995 ARXQ96QS3 562 aa18.45■□□□□ 0.54
A1CF-203ENST00000373995 SETD5Q9C0A6 1442 aa18.41■□□□□ 0.54
A1CF-203ENST00000373995 RNF17Q9BXT8 1623 aaKnown RBP18.39■□□□□ 0.54
A1CF-203ENST00000373995 KIF3BO15066 747 aa18.39■□□□□ 0.53
A1CF-203ENST00000373995 DEPDC5O75140 1603 aa18.38■□□□□ 0.53
A1CF-203ENST00000373995 SCAF1Q9H7N4 1312 aaKnown RBP18.38■□□□□ 0.53
A1CF-203ENST00000373995 MROH1Q8NDA8 1641 aa18.38■□□□□ 0.53
A1CF-203ENST00000373995 PCGF6Q9BYE7 350 aa18.37■□□□□ 0.53
A1CF-203ENST00000373995 ARID4BQ4LE39 1312 aaPredicted RBP18.36■□□□□ 0.53
A1CF-203ENST00000373995 PRDM15P57071 1507 aaPredicted RBP18.36■□□□□ 0.53
A1CF-203ENST00000373995 RAB3GAP2Q9H2M9 1393 aa18.36■□□□□ 0.53
A1CF-203ENST00000373995 UNC13BO14795 1591 aa18.35■□□□□ 0.53
A1CF-203ENST00000373995 HRCP23327 699 aa18.33■□□□□ 0.53
A1CF-203ENST00000373995 VWDEQ8N2E2 1590 aa18.32■□□□□ 0.52
A1CF-203ENST00000373995 GGT6Q6P531 493 aa18.32■□□□□ 0.52
A1CF-203ENST00000373995 PPP6R1Q9UPN7 881 aa18.31■□□□□ 0.52
A1CF-203ENST00000373995 KDM5DQ9BY66 1539 aa18.31■□□□□ 0.52
A1CF-203ENST00000373995 FAM135AQ9P2D6 1515 aa18.31■□□□□ 0.52
A1CF-203ENST00000373995 MLECQ14165 292 aa18.3■□□□□ 0.52
A1CF-203ENST00000373995 ADAMTSL3P82987 1691 aa18.29■□□□□ 0.52
A1CF-203ENST00000373995 ACIN1Q9UKV3 1341 aaKnown RBP18.28■□□□□ 0.52
A1CF-203ENST00000373995 PLEKHG5O94827 1062 aa18.27■□□□□ 0.52
A1CF-203ENST00000373995 NUP155O75694 1391 aa18.27■□□□□ 0.52
A1CF-203ENST00000373995 ABCC3O15438 1527 aa18.27■□□□□ 0.52
A1CF-203ENST00000373995 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.27■□□□□ 0.522e-6■■□□□ 12.7
A1CF-203ENST00000373995 LMTK2Q8IWU2 1503 aa18.27■□□□□ 0.51
A1CF-203ENST00000373995 IQGAP3Q86VI3 1631 aa18.27■□□□□ 0.51
A1CF-203ENST00000373995 ZC3H13Q5T200 1668 aaKnown RBP18.26■□□□□ 0.51
A1CF-203ENST00000373995 KANK1Q14678 1352 aa18.26■□□□□ 0.51
A1CF-203ENST00000373995 WASHC2CQ9Y4E1 1318 aa18.25■□□□□ 0.51
A1CF-203ENST00000373995 MADDQ8WXG6 1647 aa18.25■□□□□ 0.51
A1CF-203ENST00000373995 PZPP20742 1482 aa18.24■□□□□ 0.51
A1CF-203ENST00000373995 CNTLNQ9NXG0 1405 aa18.24■□□□□ 0.51
A1CF-203ENST00000373995 FER1L4A9Z1Z3 1794 aa18.23■□□□□ 0.51
A1CF-203ENST00000373995 CEP152O94986 1710 aa18.22■□□□□ 0.51
A1CF-203ENST00000373995 CLTCQ00610 1675 aaKnown RBP18.22■□□□□ 0.51
A1CF-203ENST00000373995 TRIM52Q96A61 297 aa18.22■□□□□ 0.51
A1CF-203ENST00000373995 RTN4Q9NQC3 1192 aaKnown RBP18.22■□□□□ 0.51
A1CF-203ENST00000373995 MROH2AA6NES4 1674 aa18.2■□□□□ 0.5
A1CF-203ENST00000373995 TET3O43151 1660 aa18.2■□□□□ 0.5
A1CF-203ENST00000373995 EFCAB6Q5THR3 1501 aa18.2■□□□□ 0.5
A1CF-203ENST00000373995 KDM4FA0A1W2PPD8 638 aa18.2■□□□□ 0.5
A1CF-203ENST00000373995 CENPBP07199 599 aaPredicted RBP18.2■□□□□ 0.5
A1CF-203ENST00000373995 ARHGAP31Q2M1Z3 1444 aa18.2■□□□□ 0.5
A1CF-203ENST00000373995 CAMSAP1Q5T5Y3 1602 aa18.2■□□□□ 0.5
A1CF-203ENST00000373995 ESF1Q9H501 851 aaKnown RBP18.19■□□□□ 0.5
A1CF-203ENST00000373995 ZMYM3Q14202 1370 aa18.18■□□□□ 0.5
A1CF-203ENST00000373995 PLPPR3Q6T4P5 718 aa18.18■□□□□ 0.5
A1CF-203ENST00000373995 RIMS1Q86UR5 1692 aaKnown RBP18.17■□□□□ 0.5
A1CF-203ENST00000373995 MPHOSPH9Q99550 1183 aa18.17■□□□□ 0.5
A1CF-203ENST00000373995 NPATQ14207 1427 aa18.17■□□□□ 0.5
A1CF-203ENST00000373995 SLC4A1APQ9BWU0 796 aaKnown RBP18.17■□□□□ 0.5
A1CF-203ENST00000373995 RPRD2Q5VT52 1461 aaKnown RBP18.16■□□□□ 0.5
A1CF-203ENST00000373995 E9PCH4 1651 aa18.15■□□□□ 0.5
A1CF-203ENST00000373995 PTPRMP28827 1452 aa18.14■□□□□ 0.5
A1CF-203ENST00000373995 C3P01024 1663 aa18.14■□□□□ 0.49
A1CF-203ENST00000373995 PKD2Q13563 968 aa18.13■□□□□ 0.49
A1CF-203ENST00000373995 DHX57Q6P158 1386 aaKnown RBP18.11■□□□□ 0.49
A1CF-203ENST00000373995 CEBPAP49715 358 aaPredicted RBP18.1■□□□□ 0.49
A1CF-203ENST00000373995 UBE2Q2Q8WVN8 375 aa18.1■□□□□ 0.49
A1CF-203ENST00000373995 NOS1P29475 1434 aa18.1■□□□□ 0.49
A1CF-203ENST00000373995 SPATA31D1Q6ZQQ2 1576 aa18.1■□□□□ 0.49
A1CF-203ENST00000373995 ERVK-7P63135 1459 aa18.09■□□□□ 0.49
A1CF-203ENST00000373995 FBXO31Q5XUX0 539 aaPredicted RBP18.09■□□□□ 0.49
A1CF-203ENST00000373995 PTPRTO14522 1441 aa18.09■□□□□ 0.49
A1CF-203ENST00000373995 PREX1Q8TCU6 1659 aa18.08■□□□□ 0.48
A1CF-203ENST00000373995 PLA2R1Q13018 1463 aa18.07■□□□□ 0.48
A1CF-203ENST00000373995 FOXD1Q16676 465 aa18.07■□□□□ 0.48
A1CF-203ENST00000373995 SYNMO15061 1565 aa18.05■□□□□ 0.48
A1CF-203ENST00000373995 TRPM2O94759 1503 aa18.04■□□□□ 0.48
A1CF-203ENST00000373995 SPHKAPQ2M3C7 1700 aa18.04■□□□□ 0.48
A1CF-203ENST00000373995 ANKRD30BQ9BXX2 1392 aa18.03■□□□□ 0.48
A1CF-203ENST00000373995 CFAP65Q6ZU64 1925 aaKnown RBP18.02■□□□□ 0.48
A1CF-203ENST00000373995 PODXL2Q9NZ53 605 aa18.02■□□□□ 0.48
A1CF-203ENST00000373995 TNRQ92752 1358 aa18.02■□□□□ 0.48
A1CF-203ENST00000373995 PIK3C2BO00750 1634 aa18■□□□□ 0.47
A1CF-203ENST00000373995 UGGT1Q9NYU2 1555 aa17.99■□□□□ 0.47
A1CF-203ENST00000373995 KLHL34Q8N239 644 aa17.99■□□□□ 0.47
A1CF-203ENST00000373995 TIMELESSQ9UNS1 1208 aa17.99■□□□□ 0.47
A1CF-203ENST00000373995 SETD1BQ9UPS6 1966 aaKnown RBP17.99■□□□□ 0.47
A1CF-203ENST00000373995 SLC52A1Q9NWF4 448 aa17.98■□□□□ 0.47
A1CF-203ENST00000373995 NLRP1Q9C000 1473 aa17.98■□□□□ 0.47
A1CF-203ENST00000373995 MYO3AQ8NEV4 1616 aa17.97■□□□□ 0.47
A1CF-203ENST00000373995 CLTCL1P53675 1640 aa17.97■□□□□ 0.47
A1CF-203ENST00000373995 IDI1Q13907 227 aa17.96■□□□□ 0.47
A1CF-203ENST00000373995 CCDC144AA2RUR9 1427 aa17.96■□□□□ 0.47
A1CF-203ENST00000373995 CLSPNQ9HAW4 1339 aa17.94■□□□□ 0.46
A1CF-203ENST00000373995 ZNF142P52746 1687 aaPredicted RBP17.92■□□□□ 0.46
A1CF-203ENST00000373995 A2ML1A8K2U0 1454 aa17.92■□□□□ 0.46
A1CF-203ENST00000373995 CEP170BQ9Y4F5 1589 aaPredicted RBP17.92■□□□□ 0.46
A1CF-203ENST00000373995 UHRF1BP1Q6BDS2 1440 aa17.92■□□□□ 0.46
A1CF-203ENST00000373995 KDM5AP29375 1690 aaKnown RBP17.91■□□□□ 0.46
A1CF-203ENST00000373995 CCER1Q8TC90 406 aaPredicted RBP17.9■□□□□ 0.46
A1CF-203ENST00000373995 TMEM131LA2VDJ0 1609 aa17.9■□□□□ 0.46
A1CF-203ENST00000373995 ADGRB3O60242 1522 aa17.9■□□□□ 0.46
A1CF-203ENST00000373995 SPATA31E1Q6ZUB1 1445 aa17.9■□□□□ 0.46
A1CF-203ENST00000373995 NEURL4Q96JN8 1562 aa17.89■□□□□ 0.45
A1CF-203ENST00000373995 UBR1Q8IWV7 1749 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms