RNA–Protein interactions for RNA: ENST00000373735.1

CTNNA3-202, Transcript of catenin alpha 3, humanhuman

TSL 2

Gene CTNNA3, Length 1,083 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3-202ENST00000373735 PLA2R1Q13018 1463 aa13.66□□□□□ -0.22
CTNNA3-202ENST00000373735 ARHGAP35Q9NRY4 1499 aa13.65□□□□□ -0.22
CTNNA3-202ENST00000373735 KIDINS220Q9ULH0 1771 aa13.64□□□□□ -0.23
CTNNA3-202ENST00000373735 ITSN2Q9NZM3 1697 aa13.64□□□□□ -0.23
CTNNA3-202ENST00000373735 UBTFP17480 764 aaKnown RBP13.64□□□□□ -0.23
CTNNA3-202ENST00000373735 CHRDL2Q6WN34 429 aa13.64□□□□□ -0.23
CTNNA3-202ENST00000373735 PREX2Q70Z35 1606 aa13.64□□□□□ -0.23
CTNNA3-202ENST00000373735 TCOF1Q13428 1488 aaKnown RBP13.62□□□□□ -0.23
CTNNA3-202ENST00000373735 RTN4Q9NQC3 1192 aaKnown RBP13.62□□□□□ -0.23
CTNNA3-202ENST00000373735 FBXO3Q9UK99 471 aa13.61□□□□□ -0.23
CTNNA3-202ENST00000373735 ZNF142P52746 1687 aaPredicted RBP13.6□□□□□ -0.23
CTNNA3-202ENST00000373735 SAMD9LQ8IVG5 1584 aa13.59□□□□□ -0.23
CTNNA3-202ENST00000373735 CEP170BQ9Y4F5 1589 aaPredicted RBP13.59□□□□□ -0.23
CTNNA3-202ENST00000373735 HSPA1LP34931 641 aa13.59□□□□□ -0.23
CTNNA3-202ENST00000373735 REM2Q8IYK8 340 aaPredicted RBP13.59□□□□□ -0.23
CTNNA3-202ENST00000373735 MYO3AQ8NEV4 1616 aa13.59□□□□□ -0.23
CTNNA3-202ENST00000373735 CCDC18Q5T9S5 1454 aa13.59□□□□□ -0.23
CTNNA3-202ENST00000373735 SPAG9O60271 1321 aaKnown RBP13.59□□□□□ -0.23
CTNNA3-202ENST00000373735 MED1Q15648 1581 aaPredicted RBP13.58□□□□□ -0.23
CTNNA3-202ENST00000373735 PTPRKQ15262 1439 aa13.58□□□□□ -0.24
CTNNA3-202ENST00000373735 TOM1O60784 492 aa13.58□□□□□ -0.24
CTNNA3-202ENST00000373735 LRRIQ1Q96JM4 1722 aa13.58□□□□□ -0.24
CTNNA3-202ENST00000373735 SPDYE2BA6NHP3 402 aa13.56□□□□□ -0.24
CTNNA3-202ENST00000373735 SPDYE6P0CI01 402 aa13.56□□□□□ -0.24
CTNNA3-202ENST00000373735 SPDYE2Q495Y8 402 aa13.56□□□□□ -0.24
CTNNA3-202ENST00000373735 ZNF777Q9ULD5 760 aaPredicted RBP13.56□□□□□ -0.24
CTNNA3-202ENST00000373735 CLTCQ00610 1675 aaKnown RBP13.56□□□□□ -0.24
CTNNA3-202ENST00000373735 SUPT6HQ7KZ85 1726 aaKnown RBP13.56□□□□□ -0.24
CTNNA3-202ENST00000373735 PIP4K2BP78356 416 aa13.55□□□□□ -0.24
CTNNA3-202ENST00000373735 CDC42BPAQ5VT25 1732 aa13.55□□□□□ -0.24
CTNNA3-202ENST00000373735 CASKIN1Q8WXD9 1431 aa13.55□□□□□ -0.24
CTNNA3-202ENST00000373735 A2MP01023 1474 aa13.55□□□□□ -0.24
CTNNA3-202ENST00000373735 CPS1P31327 1500 aa13.54□□□□□ -0.24
CTNNA3-202ENST00000373735 PLXNC1O60486 1568 aa13.54□□□□□ -0.24
CTNNA3-202ENST00000373735 HNRNPMP52272 730 aaKnown RBP eCLIP13.54□□□□□ -0.24
CTNNA3-202ENST00000373735 GGT6Q6P531 493 aa13.54□□□□□ -0.24
CTNNA3-202ENST00000373735 PROM2Q8N271 834 aa13.54□□□□□ -0.24
CTNNA3-202ENST00000373735 A2ML1A8K2U0 1454 aa13.54□□□□□ -0.24
CTNNA3-202ENST00000373735 ATP7AQ04656 1500 aa13.54□□□□□ -0.24
CTNNA3-202ENST00000373735 SYCP2Q9BX26 1530 aa13.54□□□□□ -0.24
CTNNA3-202ENST00000373735 KIAA1107Q9UPP5 1409 aa13.53□□□□□ -0.24
CTNNA3-202ENST00000373735 PLEKHH2Q8IVE3 1493 aa13.52□□□□□ -0.25
CTNNA3-202ENST00000373735 GPATCH8Q9UKJ3 1502 aaKnown RBP13.51□□□□□ -0.25
CTNNA3-202ENST00000373735 SHANK2Q9UPX8 1470 aa13.51□□□□□ -0.25
CTNNA3-202ENST00000373735 DNMT1P26358 1616 aaKnown RBP13.5□□□□□ -0.25
CTNNA3-202ENST00000373735 INO80Q9ULG1 1556 aaPredicted RBP13.5□□□□□ -0.25
CTNNA3-202ENST00000373735 CFDP1Q9UEE9 299 aaPredicted RBP13.48□□□□□ -0.25
CTNNA3-202ENST00000373735 PITPNM1O00562 1244 aa13.47□□□□□ -0.25
CTNNA3-202ENST00000373735 POLR1AO95602 1720 aaPredicted RBP13.47□□□□□ -0.25
CTNNA3-202ENST00000373735 TNRQ92752 1358 aa13.46□□□□□ -0.25
CTNNA3-202ENST00000373735 NEURL4Q96JN8 1562 aa13.46□□□□□ -0.25
CTNNA3-202ENST00000373735 ANKLE2Q86XL3 938 aa13.46□□□□□ -0.25
CTNNA3-202ENST00000373735 FYCO1Q9BQS8 1478 aa13.46□□□□□ -0.25
CTNNA3-202ENST00000373735 ADGBQ8N7X0 1667 aa13.46□□□□□ -0.26
CTNNA3-202ENST00000373735 CCNB3Q8WWL7 1395 aa13.45□□□□□ -0.26
CTNNA3-202ENST00000373735 THEMISQ8N1K5 641 aaPredicted RBP13.44□□□□□ -0.26
CTNNA3-202ENST00000373735 SSUH2Q9Y2M2 353 aa13.44□□□□□ -0.26
CTNNA3-202ENST00000373735 VWDEQ8N2E2 1590 aa13.43□□□□□ -0.26
CTNNA3-202ENST00000373735 DHX29Q7Z478 1369 aaKnown RBP13.43□□□□□ -0.26
CTNNA3-202ENST00000373735 PZPP20742 1482 aa13.42□□□□□ -0.26
CTNNA3-202ENST00000373735 RTEL1-TNFRSF6BF6WH68 1400 aa13.42□□□□□ -0.26
CTNNA3-202ENST00000373735 FBXO31Q5XUX0 539 aaPredicted RBP13.42□□□□□ -0.26
CTNNA3-202ENST00000373735 FAM135AQ9P2D6 1515 aa13.42□□□□□ -0.26
CTNNA3-202ENST00000373735 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.42□□□□□ -0.26
CTNNA3-202ENST00000373735 ALKQ9UM73 1620 aa13.42□□□□□ -0.26
CTNNA3-202ENST00000373735 MED14O60244 1454 aa13.42□□□□□ -0.26
CTNNA3-202ENST00000373735 NPHP4O75161 1426 aaPredicted RBP13.41□□□□□ -0.26
CTNNA3-202ENST00000373735 ZNF692Q9BU19 519 aaPredicted RBP13.4□□□□□ -0.26
CTNNA3-202ENST00000373735 NLRP1Q9C000 1473 aa13.4□□□□□ -0.26
CTNNA3-202ENST00000373735 MIA2Q96PC5 1412 aa13.39□□□□□ -0.27
CTNNA3-202ENST00000373735 KDM5DQ9BY66 1539 aa13.39□□□□□ -0.27
CTNNA3-202ENST00000373735 DEPDC5O75140 1603 aa13.39□□□□□ -0.27
CTNNA3-202ENST00000373735 KIF3BO15066 747 aa13.39□□□□□ -0.27
CTNNA3-202ENST00000373735 MBD5Q9P267 1494 aa13.39□□□□□ -0.27
CTNNA3-202ENST00000373735 WASHC2CQ9Y4E1 1318 aa13.39□□□□□ -0.27
CTNNA3-202ENST00000373735 UGGT1Q9NYU2 1555 aa13.38□□□□□ -0.27
CTNNA3-202ENST00000373735 MTUS2Q5JR59 1369 aa13.37□□□□□ -0.27
CTNNA3-202ENST00000373735 LRRC7Q96NW7 1537 aa13.37□□□□□ -0.27
CTNNA3-202ENST00000373735 ZNF644Q9H582 1327 aaPredicted RBP13.37□□□□□ -0.27
CTNNA3-202ENST00000373735 PIP4P2Q8N4L2 257 aa13.36□□□□□ -0.27
CTNNA3-202ENST00000373735 RNF17Q9BXT8 1623 aaKnown RBP13.35□□□□□ -0.27
CTNNA3-202ENST00000373735 VASPP50552 380 aaPredicted RBP13.35□□□□□ -0.27
CTNNA3-202ENST00000373735 SYNMO15061 1565 aa13.35□□□□□ -0.27
CTNNA3-202ENST00000373735 IQGAP1P46940 1657 aa13.34□□□□□ -0.27
CTNNA3-202ENST00000373735 RSPH4AQ5TD94 716 aa13.34□□□□□ -0.27
CTNNA3-202ENST00000373735 RGS17Q9UGC6 210 aaPredicted RBP13.34□□□□□ -0.27
CTNNA3-202ENST00000373735 TIAM1Q13009 1591 aa13.32□□□□□ -0.28
CTNNA3-202ENST00000373735 CCDC141Q6ZP82 1450 aa13.31□□□□□ -0.28
CTNNA3-202ENST00000373735 FXR2P51116 673 aaKnown RBP eCLIP13.31□□□□□ -0.28
CTNNA3-202ENST00000373735 STRCP1A6NGW2 1772 aa13.3□□□□□ -0.28
CTNNA3-202ENST00000373735 CEP162Q5TB80 1403 aa13.29□□□□□ -0.28
CTNNA3-202ENST00000373735 EHBP1L1Q8N3D4 1523 aa13.29□□□□□ -0.28
CTNNA3-202ENST00000373735 SPDYE1Q8NFV5 336 aaPredicted RBP13.27□□□□□ -0.29
CTNNA3-202ENST00000373735 TSPY4P0CV99 314 aa13.26□□□□□ -0.29
CTNNA3-202ENST00000373735 TSPY10P0CW01 314 aa13.26□□□□□ -0.29
CTNNA3-202ENST00000373735 FAM135BQ49AJ0 1406 aa13.26□□□□□ -0.29
CTNNA3-202ENST00000373735 ZC3H13Q5T200 1668 aaKnown RBP13.25□□□□□ -0.29
CTNNA3-202ENST00000373735 ERVK-7P63135 1459 aa13.25□□□□□ -0.29
CTNNA3-202ENST00000373735 CAMSAP2Q08AD1 1489 aa13.25□□□□□ -0.29
CTNNA3-202ENST00000373735 SCAF11Q99590 1463 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms