RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 MBD5Q9P267 1494 aa13.91□□□□□ -0.18
PGK1-201ENST00000373316 KDM5BQ9UGL1 1544 aa13.9□□□□□ -0.18
PGK1-201ENST00000373316 ITSN2Q9NZM3 1697 aa13.9□□□□□ -0.18
PGK1-201ENST00000373316 CFAP44Q96MT7 982 aa13.9□□□□□ -0.19
PGK1-201ENST00000373316 MYH16Q9H6N6 1097 aa13.89□□□□□ -0.19
PGK1-201ENST00000373316 KNSTRNQ9Y448 316 aa13.88□□□□□ -0.19
PGK1-201ENST00000373316 CARD11Q9BXL7 1154 aa13.88□□□□□ -0.19
PGK1-201ENST00000373316 WDR7Q9Y4E6 1490 aa13.87□□□□□ -0.19
PGK1-201ENST00000373316 NBPF8Q3BBV2 869 aa13.87□□□□□ -0.19
PGK1-201ENST00000373316 HSP90AA1P07900 732 aaKnown RBP13.86□□□□□ -0.19
PGK1-201ENST00000373316 PLEKHH2Q8IVE3 1493 aa13.86□□□□□ -0.19
PGK1-201ENST00000373316 SCAPERQ9BY12 1400 aa13.86□□□□□ -0.19
PGK1-201ENST00000373316 SPAG9O60271 1321 aaKnown RBP13.85□□□□□ -0.19
PGK1-201ENST00000373316 GLIPR1L2Q4G1C9 344 aa13.85□□□□□ -0.19
PGK1-201ENST00000373316 PLCH2O75038 1416 aa13.85□□□□□ -0.19
PGK1-201ENST00000373316 GCC2Q8IWJ2 1684 aa13.85□□□□□ -0.19
PGK1-201ENST00000373316 ROCK1Q13464 1354 aa13.85□□□□□ -0.19
PGK1-201ENST00000373316 PREX2Q70Z35 1606 aa13.85□□□□□ -0.19
PGK1-201ENST00000373316 CCDC141Q6ZP82 1450 aa13.84□□□□□ -0.19
PGK1-201ENST00000373316 TMF1P82094 1093 aa13.84□□□□□ -0.19
PGK1-201ENST00000373316 RALBP1Q15311 655 aa13.84□□□□□ -0.19
PGK1-201ENST00000373316 PZPP20742 1482 aa13.84□□□□□ -0.19
PGK1-201ENST00000373316 FAM69CQ0P6D2 419 aa13.84□□□□□ -0.19
PGK1-201ENST00000373316 CHGAP10645 457 aaKnown RBP13.84□□□□□ -0.19
PGK1-201ENST00000373316 KIF3BO15066 747 aa13.83□□□□□ -0.2
PGK1-201ENST00000373316 FANCAO15360 1455 aa13.83□□□□□ -0.2
PGK1-201ENST00000373316 NPM2Q86SE8 214 aaKnown RBP13.82□□□□□ -0.2
PGK1-201ENST00000373316 GGT6Q6P531 493 aa13.81□□□□□ -0.2
PGK1-201ENST00000373316 MYO5CQ9NQX4 1742 aa13.81□□□□□ -0.2
PGK1-201ENST00000373316 UHRF1BP1LA0JNW5 1464 aa13.81□□□□□ -0.2
PGK1-201ENST00000373316 NUDCQ9Y266 331 aa13.81□□□□□ -0.2
PGK1-201ENST00000373316 ANKRD30BQ9BXX2 1392 aa13.81□□□□□ -0.2
PGK1-201ENST00000373316 EIF3AQ14152 1382 aaKnown RBP13.8□□□□□ -0.2
PGK1-201ENST00000373316 HAP1P54257 671 aaPredicted RBP13.8□□□□□ -0.2
PGK1-201ENST00000373316 DCAF11Q8TEB1 546 aa13.8□□□□□ -0.2
PGK1-201ENST00000373316 CD109Q6YHK3 1445 aa13.79□□□□□ -0.2
PGK1-201ENST00000373316 CROCC2H7BZ55 1655 aa13.78□□□□□ -0.2
PGK1-201ENST00000373316 GOLGA6L22H0YM25 854 aa13.78□□□□□ -0.2
PGK1-201ENST00000373316 HSPA5P11021 654 aaKnown RBP13.78□□□□□ -0.2
PGK1-201ENST00000373316 SUPT16HQ9Y5B9 1047 aaKnown RBP13.78□□□□□ -0.2
PGK1-201ENST00000373316 ADGRL1O94910 1474 aa13.78□□□□□ -0.2
PGK1-201ENST00000373316 PDE3BQ13370 1112 aa13.78□□□□□ -0.2
PGK1-201ENST00000373316 PLPPR3Q6T4P5 718 aa13.78□□□□□ -0.2
PGK1-201ENST00000373316 KTN1Q86UP2 1357 aaKnown RBP13.77□□□□□ -0.21
PGK1-201ENST00000373316 C11orf95C9JLR9 678 aaPredicted RBP13.76□□□□□ -0.21
PGK1-201ENST00000373316 SENP3-EIF4A1A0A087X0R7 540 aa13.76□□□□□ -0.21
PGK1-201ENST00000373316 RIMBP3CA6NJZ7 1639 aa13.76□□□□□ -0.21
PGK1-201ENST00000373316 RIMBP3BA6NNM3 1639 aa13.76□□□□□ -0.21
PGK1-201ENST00000373316 RIMBP3Q9UFD9 1639 aa13.76□□□□□ -0.21
PGK1-201ENST00000373316 MLECQ14165 292 aa13.76□□□□□ -0.21
PGK1-201ENST00000373316 NUTM2DQ5VT03 806 aaPredicted RBP13.76□□□□□ -0.21
PGK1-201ENST00000373316 STAC3Q96MF2 364 aa13.75□□□□□ -0.21
PGK1-201ENST00000373316 CASC1Q6TDU7 716 aa13.75□□□□□ -0.21
PGK1-201ENST00000373316 ADGBQ8N7X0 1667 aa13.75□□□□□ -0.21
PGK1-201ENST00000373316 ADGRL2O95490 1459 aa13.75□□□□□ -0.21
PGK1-201ENST00000373316 HDGFP51858 240 aaKnown RBP13.75□□□□□ -0.21
PGK1-201ENST00000373316 PTMSP20962 102 aa13.73□□□□□ -0.21
PGK1-201ENST00000373316 KIAA1107Q9UPP5 1409 aa13.73□□□□□ -0.21
PGK1-201ENST00000373316 ABCC1P33527 1531 aa13.72□□□□□ -0.21
PGK1-201ENST00000373316 TSPOAP1O95153 1857 aa13.72□□□□□ -0.21
PGK1-201ENST00000373316 NGEFQ8N5V2 710 aa13.71□□□□□ -0.21
PGK1-201ENST00000373316 NBPF1Q3BBV0 1214 aa13.7□□□□□ -0.22
PGK1-201ENST00000373316 MAPK8IP3Q9UPT6 1336 aa13.7□□□□□ -0.22
PGK1-201ENST00000373316 CFAP65Q6ZU64 1925 aaKnown RBP13.7□□□□□ -0.22
PGK1-201ENST00000373316 ARHGEF5Q12774 1597 aa13.69□□□□□ -0.22
PGK1-201ENST00000373316 FAM135AQ9P2D6 1515 aa13.69□□□□□ -0.22
PGK1-201ENST00000373316 SHANK2Q9UPX8 1470 aa13.69□□□□□ -0.22
PGK1-201ENST00000373316 RPRD2Q5VT52 1461 aaKnown RBP13.69□□□□□ -0.22
PGK1-201ENST00000373316 NCLP19338 710 aaKnown RBP13.69□□□□□ -0.22
PGK1-201ENST00000373316 CHMP4AQ9BY43 222 aa13.68□□□□□ -0.22
PGK1-201ENST00000373316 CALD1Q05682 793 aaKnown RBP13.67□□□□□ -0.22
PGK1-201ENST00000373316 NOP58Q9Y2X3 529 aaKnown RBP13.67□□□□□ -0.22
PGK1-201ENST00000373316 TCERG1O14776 1098 aaKnown RBP13.67□□□□□ -0.22
PGK1-201ENST00000373316 WASHC2AQ641Q2 1341 aa13.66□□□□□ -0.22
PGK1-201ENST00000373316 TRHP20396 242 aaPredicted RBP13.66□□□□□ -0.22
PGK1-201ENST00000373316 TEX14Q8IWB6 1497 aa13.65□□□□□ -0.22
PGK1-201ENST00000373316 ABCA9Q8IUA7 1624 aa13.65□□□□□ -0.22
PGK1-201ENST00000373316 PLA2R1Q13018 1463 aa13.64□□□□□ -0.23
PGK1-201ENST00000373316 ZFYVE16Q7Z3T8 1539 aa13.64□□□□□ -0.23
PGK1-201ENST00000373316 FTSJ3Q8IY81 847 aaKnown RBP13.64□□□□□ -0.23
PGK1-201ENST00000373316 YEATS2Q9ULM3 1422 aa13.64□□□□□ -0.23
PGK1-201ENST00000373316 CCDC144AA2RUR9 1427 aa13.63□□□□□ -0.23
PGK1-201ENST00000373316 UGGT1Q9NYU2 1555 aa13.63□□□□□ -0.23
PGK1-201ENST00000373316 ATP7AQ04656 1500 aa13.62□□□□□ -0.23
PGK1-201ENST00000373316 ST20-MTHFSA0A0A6YYL1 179 aa13.61□□□□□ -0.23
PGK1-201ENST00000373316 WASHC2CQ9Y4E1 1318 aa13.61□□□□□ -0.23
PGK1-201ENST00000373316 DUOX2Q9NRD8 1548 aa13.6□□□□□ -0.23
PGK1-201ENST00000373316 L1TD1Q5T7N2 865 aaKnown RBP13.59□□□□□ -0.23
PGK1-201ENST00000373316 NLRP13Q86W25 1043 aa13.59□□□□□ -0.23
PGK1-201ENST00000373316 SALL2Q9Y467 1007 aaPredicted RBP13.59□□□□□ -0.23
PGK1-201ENST00000373316 IPO8O15397 1037 aaKnown RBP13.59□□□□□ -0.23
PGK1-201ENST00000373316 FBXO31Q5XUX0 539 aaPredicted RBP13.58□□□□□ -0.23
PGK1-201ENST00000373316 CCDC184Q52MB2 194 aa13.58□□□□□ -0.24
PGK1-201ENST00000373316 TRIM44Q96DX7 344 aaPredicted RBP13.58□□□□□ -0.24
PGK1-201ENST00000373316 A2MP01023 1474 aa13.57□□□□□ -0.24
PGK1-201ENST00000373316 DHX29Q7Z478 1369 aaKnown RBP13.57□□□□□ -0.24
PGK1-201ENST00000373316 POGZQ7Z3K3 1410 aa13.57□□□□□ -0.24
PGK1-201ENST00000373316 USP47Q96K76 1375 aa13.56□□□□□ -0.24
PGK1-201ENST00000373316 KIDINS220Q9ULH0 1771 aa13.56□□□□□ -0.24
PGK1-201ENST00000373316 AAMPQ13685 434 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms