RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 FBXO31Q5XUX0 539 aaPredicted RBP30.62■■■□□ 2.49
TRAPPC3-204ENST00000373166 TNRQ92752 1358 aa30.62■■■□□ 2.49
TRAPPC3-204ENST00000373166 DNMT1P26358 1616 aaKnown RBP30.62■■■□□ 2.49
TRAPPC3-204ENST00000373166 WASHC2CQ9Y4E1 1318 aa30.59■■■□□ 2.49
TRAPPC3-204ENST00000373166 CCDC141Q6ZP82 1450 aa30.57■■■□□ 2.48
TRAPPC3-204ENST00000373166 PZPP20742 1482 aa30.56■■■□□ 2.48
TRAPPC3-204ENST00000373166 KDM5DQ9BY66 1539 aa30.55■■■□□ 2.48
TRAPPC3-204ENST00000373166 SCAF1Q9H7N4 1312 aaKnown RBP30.54■■■□□ 2.48
TRAPPC3-204ENST00000373166 FAM135AQ9P2D6 1515 aa30.54■■■□□ 2.48
TRAPPC3-204ENST00000373166 TOM1O60784 492 aa30.54■■■□□ 2.48
TRAPPC3-204ENST00000373166 ANKLE2Q86XL3 938 aa30.54■■■□□ 2.48
TRAPPC3-204ENST00000373166 THEMISQ8N1K5 641 aaPredicted RBP30.54■■■□□ 2.48
TRAPPC3-204ENST00000373166 CAMSAP2Q08AD1 1489 aa30.51■■■□□ 2.48
TRAPPC3-204ENST00000373166 NCOA2Q15596 1464 aa30.51■■■□□ 2.48
TRAPPC3-204ENST00000373166 TSPY4P0CV99 314 aa30.51■■■□□ 2.47
TRAPPC3-204ENST00000373166 TSPY10P0CW01 314 aa30.51■■■□□ 2.47
TRAPPC3-204ENST00000373166 PIP4K2BP78356 416 aa30.51■■■□□ 2.47
TRAPPC3-204ENST00000373166 CPS1P31327 1500 aa30.51■■■□□ 2.47
TRAPPC3-204ENST00000373166 SHANK2Q9UPX8 1470 aa30.5■■■□□ 2.47
TRAPPC3-204ENST00000373166 MIA2Q96PC5 1412 aa30.49■■■□□ 2.47
TRAPPC3-204ENST00000373166 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.49■■■□□ 2.47
TRAPPC3-204ENST00000373166 NEURL4Q96JN8 1562 aa30.47■■■□□ 2.47
TRAPPC3-204ENST00000373166 HSPA1LP34931 641 aa30.47■■■□□ 2.47
TRAPPC3-204ENST00000373166 NLRP1Q9C000 1473 aa30.46■■■□□ 2.47
TRAPPC3-204ENST00000373166 LOC105371045A0A1W2PR82 267 aa30.46■■■□□ 2.47
TRAPPC3-204ENST00000373166 POLR1AO95602 1720 aaPredicted RBP30.44■■■□□ 2.46
TRAPPC3-204ENST00000373166 UGGT1Q9NYU2 1555 aa30.41■■■□□ 2.46
TRAPPC3-204ENST00000373166 NPHP4O75161 1426 aaPredicted RBP30.39■■■□□ 2.46
TRAPPC3-204ENST00000373166 ARHGEF5Q12774 1597 aa30.39■■■□□ 2.46
TRAPPC3-204ENST00000373166 MED14O60244 1454 aa30.38■■■□□ 2.45
TRAPPC3-204ENST00000373166 VWDEQ8N2E2 1590 aa30.35■■■□□ 2.45
TRAPPC3-204ENST00000373166 DEPDC5O75140 1603 aa30.33■■■□□ 2.45
TRAPPC3-204ENST00000373166 MED1Q15648 1581 aaPredicted RBP30.3■■■□□ 2.44
TRAPPC3-204ENST00000373166 ABCC3O15438 1527 aa30.28■■■□□ 2.44
TRAPPC3-204ENST00000373166 LRRC9Q6ZRR7 1453 aa30.27■■■□□ 2.44
TRAPPC3-204ENST00000373166 RNF17Q9BXT8 1623 aaKnown RBP30.26■■■□□ 2.44
TRAPPC3-204ENST00000373166 VPS8Q8N3P4 1428 aa30.25■■■□□ 2.43
TRAPPC3-204ENST00000373166 MAST1Q9Y2H9 1570 aa30.24■■■□□ 2.43
TRAPPC3-204ENST00000373166 ERVK-7P63135 1459 aa30.24■■■□□ 2.43
TRAPPC3-204ENST00000373166 IQGAP1P46940 1657 aa30.23■■■□□ 2.43
TRAPPC3-204ENST00000373166 PHF23Q9BUL5 403 aaPredicted RBP30.22■■■□□ 2.43
TRAPPC3-204ENST00000373166 ZC3H13Q5T200 1668 aaKnown RBP30.22■■■□□ 2.43
TRAPPC3-204ENST00000373166 LRRC7Q96NW7 1537 aa30.2■■■□□ 2.42
TRAPPC3-204ENST00000373166 EIF2AK4Q9P2K8 1649 aaKnown RBP30.19■■■□□ 2.42
TRAPPC3-204ENST00000373166 ALKQ9UM73 1620 aa30.18■■■□□ 2.42
TRAPPC3-204ENST00000373166 KANK4Q5T7N3 995 aaPredicted RBP30.17■■■□□ 2.42
TRAPPC3-204ENST00000373166 MYOM3Q5VTT5 1437 aa30.16■■■□□ 2.42
TRAPPC3-204ENST00000373166 SENP3Q9H4L4 574 aaPredicted RBP30.14■■■□□ 2.42
TRAPPC3-204ENST00000373166 SCAF11Q99590 1463 aaKnown RBP30.13■■■□□ 2.41
TRAPPC3-204ENST00000373166 TXNDC2Q86VQ3 553 aa30.13■■■□□ 2.41
TRAPPC3-204ENST00000373166 MROH1Q8NDA8 1641 aa30.13■■■□□ 2.41
TRAPPC3-204ENST00000373166 DUOX2Q9NRD8 1548 aa30.12■■■□□ 2.41
TRAPPC3-204ENST00000373166 LTKP29376 864 aa30.11■■■□□ 2.41
TRAPPC3-204ENST00000373166 MAP3K1Q13233 1512 aa30.11■■■□□ 2.41
TRAPPC3-204ENST00000373166 SYNMO15061 1565 aa30.11■■■□□ 2.41
TRAPPC3-204ENST00000373166 EID1Q9Y6B2 187 aa30.1■■■□□ 2.41
TRAPPC3-204ENST00000373166 STRCP1A6NGW2 1772 aa30.08■■■□□ 2.41
TRAPPC3-204ENST00000373166 ARHGAP31Q2M1Z3 1444 aa30.08■■■□□ 2.41
TRAPPC3-204ENST00000373166 KIF15Q9NS87 1388 aa30.08■■■□□ 2.41
TRAPPC3-204ENST00000373166 UBR1Q8IWV7 1749 aa30.07■■■□□ 2.4
TRAPPC3-204ENST00000373166 RRP7BPQ9NSQ0 103 aa30.06■■■□□ 2.4
TRAPPC3-204ENST00000373166 ARHGAP23Q9P227 1491 aa30.06■■■□□ 2.4
TRAPPC3-204ENST00000373166 SLIT1O75093 1534 aa30.05■■■□□ 2.4
TRAPPC3-204ENST00000373166 CEP152O94986 1710 aa30.05■■■□□ 2.4
TRAPPC3-204ENST00000373166 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.04■■■□□ 2.4
TRAPPC3-204ENST00000373166 ERBINQ96RT1 1412 aa30.03■■■□□ 2.4
TRAPPC3-204ENST00000373166 STAG3Q9UJ98 1225 aa30.02■■■□□ 2.4
TRAPPC3-204ENST00000373166 PRDM15P57071 1507 aaPredicted RBP30.01■■■□□ 2.39
TRAPPC3-204ENST00000373166 ABCC5O15440 1437 aa29.99■■■□□ 2.39
TRAPPC3-204ENST00000373166 KANK1Q14678 1352 aa29.99■■■□□ 2.39
TRAPPC3-204ENST00000373166 TMEM2Q9UHN6 1383 aa29.98■■■□□ 2.39
TRAPPC3-204ENST00000373166 CFAP65Q6ZU64 1925 aaKnown RBP29.96■■■□□ 2.39
TRAPPC3-204ENST00000373166 APLP2Q06481 763 aa29.93■■■□□ 2.38
TRAPPC3-204ENST00000373166 IDI1Q13907 227 aa29.91■■■□□ 2.38
TRAPPC3-204ENST00000373166 DAPK1P53355 1430 aa29.9■■■□□ 2.38
TRAPPC3-204ENST00000373166 FAM135BQ49AJ0 1406 aa29.9■■■□□ 2.38
TRAPPC3-204ENST00000373166 PIK3C2BO00750 1634 aa29.89■■■□□ 2.38
TRAPPC3-204ENST00000373166 KCNA6P17658 529 aa29.89■■■□□ 2.38
TRAPPC3-204ENST00000373166 RGS17Q9UGC6 210 aaPredicted RBP29.88■■■□□ 2.37
TRAPPC3-204ENST00000373166 PTPN23Q9H3S7 1636 aa29.88■■■□□ 2.37
TRAPPC3-204ENST00000373166 TMEM94Q12767 1356 aa29.88■■■□□ 2.37
TRAPPC3-204ENST00000373166 ANKRD30AQ9BXX3 1397 aa29.87■■■□□ 2.37
TRAPPC3-204ENST00000373166 EFCAB6Q5THR3 1501 aa29.86■■■□□ 2.37
TRAPPC3-204ENST00000373166 CROCC2H7BZ55 1655 aa29.86■■■□□ 2.37
TRAPPC3-204ENST00000373166 CHIC2Q9UKJ5 165 aa29.86■■■□□ 2.37
TRAPPC3-204ENST00000373166 SLC26A8Q96RN1 970 aa29.85■■■□□ 2.37
TRAPPC3-204ENST00000373166 PROSER2Q86WR7 435 aaPredicted RBP29.84■■■□□ 2.37
TRAPPC3-204ENST00000373166 LMTK2Q8IWU2 1503 aa29.84■■■□□ 2.37
TRAPPC3-204ENST00000373166 FGD6Q6ZV73 1430 aa29.82■■■□□ 2.36
TRAPPC3-204ENST00000373166 XIRP1Q702N8 1843 aaKnown RBP29.81■■■□□ 2.36
TRAPPC3-204ENST00000373166 KDM5AP29375 1690 aaKnown RBP29.81■■■□□ 2.36
TRAPPC3-204ENST00000373166 SLC52A1Q9NWF4 448 aa29.8■■■□□ 2.36
TRAPPC3-204ENST00000373166 RBM33Q96EV2 1170 aaKnown RBP29.78■■■□□ 2.36
TRAPPC3-204ENST00000373166 BCANQ96GW7 911 aa29.78■■■□□ 2.36
TRAPPC3-204ENST00000373166 TET3O43151 1660 aa29.77■■■□□ 2.36
TRAPPC3-204ENST00000373166 NOS1P29475 1434 aa29.77■■■□□ 2.36
TRAPPC3-204ENST00000373166 ADGRB3O60242 1522 aa29.71■■■□□ 2.35
TRAPPC3-204ENST00000373166 MSH6P52701 1360 aa29.71■■■□□ 2.35
TRAPPC3-204ENST00000373166 NKTRP30414 1462 aaKnown RBP29.71■■■□□ 2.35
TRAPPC3-204ENST00000373166 POTEAQ6S8J7 498 aa29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms