RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 PLXNC1O60486 1568 aa19.25■□□□□ 0.67
CHCHD1-202ENST00000372837 SPAG9O60271 1321 aaKnown RBP19.25■□□□□ 0.67
CHCHD1-202ENST00000372837 MED14O60244 1454 aa19.24■□□□□ 0.67
CHCHD1-202ENST00000372837 STRCP1A6NGW2 1772 aa19.24■□□□□ 0.67
CHCHD1-202ENST00000372837 FBXO31Q5XUX0 539 aaPredicted RBP19.23■□□□□ 0.67
CHCHD1-202ENST00000372837 A2MP01023 1474 aa19.22■□□□□ 0.67
CHCHD1-202ENST00000372837 UPF1Q92900 1129 aaKnown RBP eCLIP19.22■□□□□ 0.67
CHCHD1-202ENST00000372837 TNRQ92752 1358 aa19.21■□□□□ 0.67
CHCHD1-202ENST00000372837 FMN1Q68DA7 1419 aa19.21■□□□□ 0.67
CHCHD1-202ENST00000372837 SRCAPQ6ZRS2 3230 aa19.2■□□□□ 0.66
CHCHD1-202ENST00000372837 HNRNPMP52272 730 aaKnown RBP eCLIP19.18■□□□□ 0.66
CHCHD1-202ENST00000372837 THEMISQ8N1K5 641 aaPredicted RBP19.18■□□□□ 0.66
CHCHD1-202ENST00000372837 EHMT2Q96KQ7 1210 aa19.18■□□□□ 0.66
CHCHD1-202ENST00000372837 ATP7AQ04656 1500 aa19.18■□□□□ 0.66
CHCHD1-202ENST00000372837 ZNF777Q9ULD5 760 aaPredicted RBP19.17■□□□□ 0.66
CHCHD1-202ENST00000372837 SYNMO15061 1565 aa19.17■□□□□ 0.66
CHCHD1-202ENST00000372837 DEPDC5O75140 1603 aa19.17■□□□□ 0.66
CHCHD1-202ENST00000372837 SYCP2Q9BX26 1530 aa19.16■□□□□ 0.66
CHCHD1-202ENST00000372837 FAM135BQ49AJ0 1406 aa19.14■□□□□ 0.65
CHCHD1-202ENST00000372837 INO80Q9ULG1 1556 aaPredicted RBP19.14■□□□□ 0.65
CHCHD1-202ENST00000372837 IQGAP1P46940 1657 aa19.14■□□□□ 0.65
CHCHD1-202ENST00000372837 LRRIQ1Q96JM4 1722 aa19.14■□□□□ 0.65
CHCHD1-202ENST00000372837 CDC42BPAQ5VT25 1732 aa19.13■□□□□ 0.65
CHCHD1-202ENST00000372837 UGGT1Q9NYU2 1555 aa19.11■□□□□ 0.65
CHCHD1-202ENST00000372837 CCER1Q8TC90 406 aaPredicted RBP19.11■□□□□ 0.65
CHCHD1-202ENST00000372837 FAM135AQ9P2D6 1515 aa19.1■□□□□ 0.65
CHCHD1-202ENST00000372837 PZPP20742 1482 aa19.1■□□□□ 0.65
CHCHD1-202ENST00000372837 ARHGAP35Q9NRY4 1499 aa19.1■□□□□ 0.65
CHCHD1-202ENST00000372837 UBTFP17480 764 aaKnown RBP19.1■□□□□ 0.65
CHCHD1-202ENST00000372837 MIA2Q96PC5 1412 aa19.09■□□□□ 0.65
CHCHD1-202ENST00000372837 NLRP1Q9C000 1473 aa19.09■□□□□ 0.65
CHCHD1-202ENST00000372837 DIEXFQ68CQ4 756 aaKnown RBP19.08■□□□□ 0.64
CHCHD1-202ENST00000372837 KIAA1107Q9UPP5 1409 aa19.07■□□□□ 0.64
CHCHD1-202ENST00000372837 CLSPNQ9HAW4 1339 aa19.05■□□□□ 0.64
CHCHD1-202ENST00000372837 GPATCH8Q9UKJ3 1502 aaKnown RBP19.05■□□□□ 0.64
CHCHD1-202ENST00000372837 XIRP1Q702N8 1843 aaKnown RBP19.04■□□□□ 0.64
CHCHD1-202ENST00000372837 TRIM52Q96A61 297 aa19.03■□□□□ 0.64
CHCHD1-202ENST00000372837 ZC3H13Q5T200 1668 aaKnown RBP19.02■□□□□ 0.64
CHCHD1-202ENST00000372837 ADGBQ8N7X0 1667 aa19.02■□□□□ 0.64
CHCHD1-202ENST00000372837 KDM5DQ9BY66 1539 aa19■□□□□ 0.63
CHCHD1-202ENST00000372837 NEUROD1Q13562 356 aa19■□□□□ 0.63
CHCHD1-202ENST00000372837 DHX29Q7Z478 1369 aaKnown RBP19■□□□□ 0.63
CHCHD1-202ENST00000372837 ROBO1Q9Y6N7 1651 aa18.99■□□□□ 0.63
CHCHD1-202ENST00000372837 PLEKHH2Q8IVE3 1493 aa18.99■□□□□ 0.63
CHCHD1-202ENST00000372837 KIF3BO15066 747 aa18.99■□□□□ 0.63
CHCHD1-202ENST00000372837 WASHC2CQ9Y4E1 1318 aa18.99■□□□□ 0.63
CHCHD1-202ENST00000372837 CCDC18Q5T9S5 1454 aa18.97■□□□□ 0.63
CHCHD1-202ENST00000372837 CFDP1Q9UEE9 299 aaPredicted RBP18.97■□□□□ 0.63
CHCHD1-202ENST00000372837 VPS8Q8N3P4 1428 aa18.97■□□□□ 0.63
CHCHD1-202ENST00000372837 JCADQ9P266 1359 aa18.95■□□□□ 0.62
CHCHD1-202ENST00000372837 ZNF316A6NFI3 1004 aaPredicted RBP18.95■□□□□ 0.62
CHCHD1-202ENST00000372837 TMEM94Q12767 1356 aa18.94■□□□□ 0.62
CHCHD1-202ENST00000372837 ZNF772Q68DY9 489 aaPredicted RBP18.94■□□□□ 0.62
CHCHD1-202ENST00000372837 SCAF11Q99590 1463 aaKnown RBP18.93■□□□□ 0.62
CHCHD1-202ENST00000372837 LTKP29376 864 aa18.93■□□□□ 0.62
CHCHD1-202ENST00000372837 LRP6O75581 1613 aa18.92■□□□□ 0.62
CHCHD1-202ENST00000372837 CASKIN1Q8WXD9 1431 aa18.92■□□□□ 0.62
CHCHD1-202ENST00000372837 RTEL1-TNFRSF6BF6WH68 1400 aa18.91■□□□□ 0.62
CHCHD1-202ENST00000372837 GTF3C3Q9Y5Q9 886 aa18.91■□□□□ 0.62
CHCHD1-202ENST00000372837 ZNF644Q9H582 1327 aaPredicted RBP18.9■□□□□ 0.62
CHCHD1-202ENST00000372837 MBD5Q9P267 1494 aa18.9■□□□□ 0.62
CHCHD1-202ENST00000372837 RXRBP28702 533 aa18.89■□□□□ 0.61
CHCHD1-202ENST00000372837 RBM33Q96EV2 1170 aaKnown RBP18.89■□□□□ 0.61
CHCHD1-202ENST00000372837 MAP3K1Q13233 1512 aa18.89■□□□□ 0.61
CHCHD1-202ENST00000372837 TXNDC2Q86VQ3 553 aa18.88■□□□□ 0.61
CHCHD1-202ENST00000372837 NCOA2Q15596 1464 aa18.87■□□□□ 0.61
CHCHD1-202ENST00000372837 LRRC9Q6ZRR7 1453 aa18.87■□□□□ 0.61
CHCHD1-202ENST00000372837 PHLPP1O60346 1717 aa18.86■□□□□ 0.61
CHCHD1-202ENST00000372837 ARHGAP23Q9P227 1491 aa18.86■□□□□ 0.61
CHCHD1-202ENST00000372837 CCNB3Q8WWL7 1395 aa18.86■□□□□ 0.61
CHCHD1-202ENST00000372837 MEX3CQ5U5Q3 659 aaKnown RBP18.86■□□□□ 0.61
CHCHD1-202ENST00000372837 CDK12Q9NYV4 1490 aaPredicted RBP18.85■□□□□ 0.61
CHCHD1-202ENST00000372837 APLP2Q06481 763 aa18.85■□□□□ 0.61
CHCHD1-202ENST00000372837 SPATA31A6Q5VVP1 1343 aa18.84■□□□□ 0.61
CHCHD1-202ENST00000372837 UBR1Q8IWV7 1749 aa18.84■□□□□ 0.61
CHCHD1-202ENST00000372837 ERVK-7P63135 1459 aa18.84■□□□□ 0.61
CHCHD1-202ENST00000372837 PROSER2Q86WR7 435 aaPredicted RBP18.83■□□□□ 0.6
CHCHD1-202ENST00000372837 SLIT1O75093 1534 aa18.83■□□□□ 0.6
CHCHD1-202ENST00000372837 KCNA6P17658 529 aa18.82■□□□□ 0.6
CHCHD1-202ENST00000372837 SLAIN2Q9P270 581 aa18.82■□□□□ 0.6
CHCHD1-202ENST00000372837 COL16A1Q07092 1604 aaPredicted RBP18.82■□□□□ 0.6
CHCHD1-202ENST00000372837 FGD6Q6ZV73 1430 aa18.79■□□□□ 0.6
CHCHD1-202ENST00000372837 ABCC3O15438 1527 aa18.79■□□□□ 0.6
CHCHD1-202ENST00000372837 EID1Q9Y6B2 187 aa18.78■□□□□ 0.6
CHCHD1-202ENST00000372837 PRDM15P57071 1507 aaPredicted RBP18.78■□□□□ 0.6
CHCHD1-202ENST00000372837 MSH6P52701 1360 aa18.76■□□□□ 0.59
CHCHD1-202ENST00000372837 RGS12O14924 1447 aa18.75■□□□□ 0.59
CHCHD1-202ENST00000372837 FYCO1Q9BQS8 1478 aa18.75■□□□□ 0.59
CHCHD1-202ENST00000372837 SETBP1Q9Y6X0 1596 aa18.74■□□□□ 0.59
CHCHD1-202ENST00000372837 ZRANB1Q9UGI0 708 aa18.74■□□□□ 0.59
CHCHD1-202ENST00000372837 TIAM1Q13009 1591 aa18.73■□□□□ 0.59
CHCHD1-202ENST00000372837 SLC26A8Q96RN1 970 aa18.73■□□□□ 0.59
CHCHD1-202ENST00000372837 TMEM2Q9UHN6 1383 aa18.72■□□□□ 0.59
CHCHD1-202ENST00000372837 AFF2P51816 1311 aa18.72■□□□□ 0.59
CHCHD1-202ENST00000372837 NKTRP30414 1462 aaKnown RBP18.71■□□□□ 0.59
CHCHD1-202ENST00000372837 CCDC141Q6ZP82 1450 aa18.71■□□□□ 0.59
CHCHD1-202ENST00000372837 NUTM2BA6NNL0 878 aaPredicted RBP18.69■□□□□ 0.58
CHCHD1-202ENST00000372837 NUTM2EB1AL46 878 aaPredicted RBP18.69■□□□□ 0.58
CHCHD1-202ENST00000372837 NUTM2DQ5VT03 806 aaPredicted RBP18.69■□□□□ 0.58
CHCHD1-202ENST00000372837 NUTM2AQ8IVF1 878 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms