RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 POLR1AO95602 1720 aaPredicted RBP24.98■■□□□ 1.59
CTSA-204ENST00000372484 DCAF11Q8TEB1 546 aa24.97■■□□□ 1.59
CTSA-204ENST00000372484 SCAPERQ9BY12 1400 aa24.97■■□□□ 1.59
CTSA-204ENST00000372484 PLA2R1Q13018 1463 aa24.97■■□□□ 1.59
CTSA-204ENST00000372484 ATP7AQ04656 1500 aa24.97■■□□□ 1.59
CTSA-204ENST00000372484 KDM2AQ9Y2K7 1162 aa24.97■■□□□ 1.59
CTSA-204ENST00000372484 INO80Q9ULG1 1556 aaPredicted RBP24.96■■□□□ 1.59
CTSA-204ENST00000372484 RALGAPBQ86X10 1494 aa24.96■■□□□ 1.59
CTSA-204ENST00000372484 USP47Q96K76 1375 aa24.95■■□□□ 1.59
CTSA-204ENST00000372484 CNTLNQ9NXG0 1405 aa24.94■■□□□ 1.58
CTSA-204ENST00000372484 KDM5CP41229 1560 aa24.92■■□□□ 1.58
CTSA-204ENST00000372484 MYT1LQ9UL68 1186 aa24.92■■□□□ 1.58
CTSA-204ENST00000372484 KIF7Q2M1P5 1343 aa24.91■■□□□ 1.58
CTSA-204ENST00000372484 ATP10AO60312 1499 aa24.9■■□□□ 1.58
CTSA-204ENST00000372484 CARD11Q9BXL7 1154 aa24.88■■□□□ 1.57
CTSA-204ENST00000372484 DEPDC5O75140 1603 aa24.88■■□□□ 1.57
CTSA-204ENST00000372484 RGL3Q3MIN7 710 aa24.88■■□□□ 1.57
CTSA-204ENST00000372484 CD109Q6YHK3 1445 aa24.87■■□□□ 1.57
CTSA-204ENST00000372484 E9PCH4 1651 aa24.85■■□□□ 1.57
CTSA-204ENST00000372484 CFAP74Q9C0B2 1584 aa24.85■■□□□ 1.57
CTSA-204ENST00000372484 BCORL1Q5H9F3 1711 aa24.85■■□□□ 1.57
CTSA-204ENST00000372484 ZNF518AQ6AHZ1 1483 aa24.84■■□□□ 1.57
CTSA-204ENST00000372484 A2MP01023 1474 aa24.83■■□□□ 1.57
CTSA-204ENST00000372484 PRAG1Q86YV5 1406 aa24.82■■□□□ 1.56
CTSA-204ENST00000372484 DHX29Q7Z478 1369 aaKnown RBP24.82■■□□□ 1.56
CTSA-204ENST00000372484 EIF2AK4Q9P2K8 1649 aaKnown RBP24.82■■□□□ 1.56
CTSA-204ENST00000372484 KIDINS220Q9ULH0 1771 aa24.82■■□□□ 1.56
CTSA-204ENST00000372484 ROCK2O75116 1388 aaKnown RBP24.81■■□□□ 1.56
CTSA-204ENST00000372484 KIF3BO15066 747 aa24.81■■□□□ 1.56
CTSA-204ENST00000372484 KANK1Q14678 1352 aa24.81■■□□□ 1.56
CTSA-204ENST00000372484 TRPM1Q7Z4N2 1603 aa24.8■■□□□ 1.56
CTSA-204ENST00000372484 TET3O43151 1660 aa24.79■■□□□ 1.56
CTSA-204ENST00000372484 VWDEQ8N2E2 1590 aa24.77■■□□□ 1.56
CTSA-204ENST00000372484 ARID4BQ4LE39 1312 aaPredicted RBP24.77■■□□□ 1.56
CTSA-204ENST00000372484 SPHKAPQ2M3C7 1700 aa24.77■■□□□ 1.56
CTSA-204ENST00000372484 TRPM2O94759 1503 aa24.76■■□□□ 1.55
CTSA-204ENST00000372484 PRDM15P57071 1507 aaPredicted RBP24.76■■□□□ 1.55
CTSA-204ENST00000372484 POGZQ7Z3K3 1410 aa24.75■■□□□ 1.55
CTSA-204ENST00000372484 ST20-MTHFSA0A0A6YYL1 179 aa24.74■■□□□ 1.55
CTSA-204ENST00000372484 POLR3GLQ9BT43 218 aa24.74■■□□□ 1.55
CTSA-204ENST00000372484 PRKRIP1Q9H875 184 aaPredicted RBP24.73■■□□□ 1.55
CTSA-204ENST00000372484 MROH1Q8NDA8 1641 aa24.73■■□□□ 1.55
CTSA-204ENST00000372484 PTPRTO14522 1441 aa24.73■■□□□ 1.55
CTSA-204ENST00000372484 CEP152O94986 1710 aa24.71■■□□□ 1.55
CTSA-204ENST00000372484 CYB5RLQ6IPT4 315 aa24.7■■□□□ 1.54
CTSA-204ENST00000372484 NBPF1Q3BBV0 1214 aa24.69■■□□□ 1.54
CTSA-204ENST00000372484 MLH3Q9UHC1 1453 aa24.69■■□□□ 1.54
CTSA-204ENST00000372484 GPRASP1Q5JY77 1395 aa24.69■■□□□ 1.54
CTSA-204ENST00000372484 HECW2Q9P2P5 1572 aa24.68■■□□□ 1.54
CTSA-204ENST00000372484 NEO1Q92859 1461 aa24.68■■□□□ 1.54
CTSA-204ENST00000372484 CLTCL1P53675 1640 aa24.68■■□□□ 1.54
CTSA-204ENST00000372484 LAMC1P11047 1609 aa24.67■■□□□ 1.54
CTSA-204ENST00000372484 RNF17Q9BXT8 1623 aaKnown RBP24.64■■□□□ 1.53
CTSA-204ENST00000372484 RIMBP3CA6NJZ7 1639 aa24.63■■□□□ 1.53
CTSA-204ENST00000372484 RIMBP3BA6NNM3 1639 aa24.63■■□□□ 1.53
CTSA-204ENST00000372484 RIMBP3Q9UFD9 1639 aa24.63■■□□□ 1.53
CTSA-204ENST00000372484 EFCAB6Q5THR3 1501 aa24.63■■□□□ 1.53
CTSA-204ENST00000372484 MAP3K4Q9Y6R4 1608 aa24.61■■□□□ 1.53
CTSA-204ENST00000372484 FRMPD1Q5SYB0 1578 aa24.61■■□□□ 1.53
CTSA-204ENST00000372484 CCDC184Q52MB2 194 aa24.61■■□□□ 1.53
CTSA-204ENST00000372484 RAPGEF3O95398 923 aa24.6■■□□□ 1.53
CTSA-204ENST00000372484 ABCA6Q8N139 1617 aa24.6■■□□□ 1.53
CTSA-204ENST00000372484 PPRC1Q5VV67 1664 aaKnown RBP24.59■■□□□ 1.53
CTSA-204ENST00000372484 MADDQ8WXG6 1647 aa24.59■■□□□ 1.53
CTSA-204ENST00000372484 LMTK2Q8IWU2 1503 aa24.59■■□□□ 1.53
CTSA-204ENST00000372484 STAC3Q96MF2 364 aa24.58■■□□□ 1.53
CTSA-204ENST00000372484 MRS2Q9HD23 443 aa24.58■■□□□ 1.52
CTSA-204ENST00000372484 HNRNPUQ00839 825 aaKnown RBP eCLIP24.56■■□□□ 1.52
CTSA-204ENST00000372484 NEURL4Q96JN8 1562 aa24.55■■□□□ 1.52
CTSA-204ENST00000372484 GGT6Q6P531 493 aa24.55■■□□□ 1.52
CTSA-204ENST00000372484 GLI2P10070 1586 aa24.54■■□□□ 1.52
CTSA-204ENST00000372484 UGGT1Q9NYU2 1555 aa24.54■■□□□ 1.52
CTSA-204ENST00000372484 KIF1BO60333 1816 aa24.54■■□□□ 1.52
CTSA-204ENST00000372484 RICTORQ6R327 1708 aa24.53■■□□□ 1.52
CTSA-204ENST00000372484 CNGB1Q14028 1251 aaPredicted RBP24.52■■□□□ 1.52
CTSA-204ENST00000372484 TESK2Q96S53 571 aa24.5■■□□□ 1.51
CTSA-204ENST00000372484 COL17A1Q9UMD9 1497 aaPredicted RBP24.5■■□□□ 1.51
CTSA-204ENST00000372484 DIP2CQ9Y2E4 1556 aa24.49■■□□□ 1.51
CTSA-204ENST00000372484 FAM9BQ8IZU0 186 aa24.49■■□□□ 1.51
CTSA-204ENST00000372484 SUPT16HQ9Y5B9 1047 aaKnown RBP24.49■■□□□ 1.51
CTSA-204ENST00000372484 CFAP65Q6ZU64 1925 aaKnown RBP24.48■■□□□ 1.51
CTSA-204ENST00000372484 NPATQ14207 1427 aa24.47■■□□□ 1.51
CTSA-204ENST00000372484 WASHC2CQ9Y4E1 1318 aa24.47■■□□□ 1.51
CTSA-204ENST00000372484 IQGAP1P46940 1657 aa24.47■■□□□ 1.51
CTSA-204ENST00000372484 DISP3Q9P2K9 1392 aa24.46■■□□□ 1.51
CTSA-204ENST00000372484 FAM69CQ0P6D2 419 aa24.46■■□□□ 1.51
CTSA-204ENST00000372484 TMF1P82094 1093 aa24.45■■□□□ 1.5
CTSA-204ENST00000372484 ABCC3O15438 1527 aa24.45■■□□□ 1.5
CTSA-204ENST00000372484 DIP2BQ9P265 1576 aa24.44■■□□□ 1.5
CTSA-204ENST00000372484 MROH2AA6NES4 1674 aa24.44■■□□□ 1.5
CTSA-204ENST00000372484 KIAA1210Q9ULL0 1709 aa24.44■■□□□ 1.5
CTSA-204ENST00000372484 MYOM2P54296 1465 aa24.43■■□□□ 1.5
CTSA-204ENST00000372484 IFT172Q9UG01 1749 aa24.42■■□□□ 1.5
CTSA-204ENST00000372484 SCAF11Q99590 1463 aaKnown RBP24.42■■□□□ 1.5
CTSA-204ENST00000372484 CAMSAP1Q5T5Y3 1602 aa24.41■■□□□ 1.5
CTSA-204ENST00000372484 YEATS2Q9ULM3 1422 aa24.4■■□□□ 1.5
CTSA-204ENST00000372484 KTN1Q86UP2 1357 aaKnown RBP24.4■■□□□ 1.5
CTSA-204ENST00000372484 ADGRB3O60242 1522 aa24.39■■□□□ 1.49
CTSA-204ENST00000372484 TSPOAP1O95153 1857 aa24.39■■□□□ 1.49
CTSA-204ENST00000372484 CHGAP10645 457 aaKnown RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms