RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 NCOA1Q15788 1441 aa30.81■■■□□ 2.52
TMEM53-205ENST00000372244 WASHC2CQ9Y4E1 1318 aa30.81■■■□□ 2.52
TMEM53-205ENST00000372244 ANKRD30AQ9BXX3 1397 aa30.8■■■□□ 2.52
TMEM53-205ENST00000372244 NPATQ14207 1427 aa30.8■■■□□ 2.52
TMEM53-205ENST00000372244 CLTCQ00610 1675 aaKnown RBP30.79■■■□□ 2.52
TMEM53-205ENST00000372244 FAM135AQ9P2D6 1515 aa30.77■■■□□ 2.52
TMEM53-205ENST00000372244 PTPRKQ15262 1439 aa30.76■■■□□ 2.51
TMEM53-205ENST00000372244 UHRF1BP1Q6BDS2 1440 aa30.75■■■□□ 2.51
TMEM53-205ENST00000372244 ERBINQ96RT1 1412 aa30.75■■■□□ 2.51
TMEM53-205ENST00000372244 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.75■■■□□ 2.51
TMEM53-205ENST00000372244 ADGRL2O95490 1459 aa30.74■■■□□ 2.51
TMEM53-205ENST00000372244 EIF2AK4Q9P2K8 1649 aaKnown RBP30.74■■■□□ 2.51
TMEM53-205ENST00000372244 PREX1Q8TCU6 1659 aa30.73■■■□□ 2.51
TMEM53-205ENST00000372244 RNF17Q9BXT8 1623 aaKnown RBP30.73■■■□□ 2.51
TMEM53-205ENST00000372244 KDM5DQ9BY66 1539 aa30.72■■■□□ 2.51
TMEM53-205ENST00000372244 FBXO31Q5XUX0 539 aaPredicted RBP30.68■■■□□ 2.5
TMEM53-205ENST00000372244 MROH1Q8NDA8 1641 aa30.66■■■□□ 2.5
TMEM53-205ENST00000372244 PZPP20742 1482 aa30.64■■■□□ 2.5
TMEM53-205ENST00000372244 ABCC3O15438 1527 aa30.64■■■□□ 2.49
TMEM53-205ENST00000372244 RRBP1Q9P2E9 1410 aaKnown RBP30.63■■■□□ 2.49
TMEM53-205ENST00000372244 ROCK1Q13464 1354 aa30.63■■■□□ 2.49
TMEM53-205ENST00000372244 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.59■■■□□ 2.49
TMEM53-205ENST00000372244 ANKRD50Q9ULJ7 1429 aa30.59■■■□□ 2.49
TMEM53-205ENST00000372244 PRDM15P57071 1507 aaPredicted RBP30.58■■■□□ 2.49
TMEM53-205ENST00000372244 ITGAEP38570 1179 aa30.57■■■□□ 2.48
TMEM53-205ENST00000372244 TNRQ92752 1358 aa30.56■■■□□ 2.48
TMEM53-205ENST00000372244 ZC3H13Q5T200 1668 aaKnown RBP30.55■■■□□ 2.48
TMEM53-205ENST00000372244 DEPDC5O75140 1603 aa30.55■■■□□ 2.48
TMEM53-205ENST00000372244 KANK1Q14678 1352 aa30.53■■■□□ 2.48
TMEM53-205ENST00000372244 ARHGAP31Q2M1Z3 1444 aa30.52■■■□□ 2.48
TMEM53-205ENST00000372244 DMRT2Q9Y5R5 561 aa30.5■■■□□ 2.47
TMEM53-205ENST00000372244 VWDEQ8N2E2 1590 aa30.5■■■□□ 2.47
TMEM53-205ENST00000372244 MYO3AQ8NEV4 1616 aa30.49■■■□□ 2.47
TMEM53-205ENST00000372244 A2ML1A8K2U0 1454 aa30.49■■■□□ 2.47
TMEM53-205ENST00000372244 CEP170BQ9Y4F5 1589 aaPredicted RBP30.47■■■□□ 2.47
TMEM53-205ENST00000372244 STRCQ7RTU9 1775 aa30.47■■■□□ 2.47
TMEM53-205ENST00000372244 LMTK2Q8IWU2 1503 aa30.46■■■□□ 2.47
TMEM53-205ENST00000372244 CEP152O94986 1710 aa30.46■■■□□ 2.47
TMEM53-205ENST00000372244 ZNF142P52746 1687 aaPredicted RBP30.45■■■□□ 2.47
TMEM53-205ENST00000372244 SPATA31D1Q6ZQQ2 1576 aa30.45■■■□□ 2.46
TMEM53-205ENST00000372244 CAMSAP1Q5T5Y3 1602 aa30.45■■■□□ 2.46
TMEM53-205ENST00000372244 ERVK-7P63135 1459 aa30.44■■■□□ 2.46
TMEM53-205ENST00000372244 NLRP1Q9C000 1473 aa30.44■■■□□ 2.46
TMEM53-205ENST00000372244 PLA2R1Q13018 1463 aa30.4■■■□□ 2.46
TMEM53-205ENST00000372244 PTPRTO14522 1441 aa30.4■■■□□ 2.46
TMEM53-205ENST00000372244 PKD2Q13563 968 aa30.39■■■□□ 2.46
TMEM53-205ENST00000372244 NCKAP5LQ9HCH0 1330 aa30.39■■■□□ 2.45
TMEM53-205ENST00000372244 THEMISQ8N1K5 641 aaPredicted RBP30.38■■■□□ 2.45
TMEM53-205ENST00000372244 CFAP65Q6ZU64 1925 aaKnown RBP30.35■■■□□ 2.45
TMEM53-205ENST00000372244 UNC13BO14795 1591 aa30.31■■■□□ 2.44
TMEM53-205ENST00000372244 UGGT1Q9NYU2 1555 aa30.31■■■□□ 2.44
TMEM53-205ENST00000372244 EFCAB6Q5THR3 1501 aa30.3■■■□□ 2.44
TMEM53-205ENST00000372244 NAIPQ13075 1403 aa30.3■■■□□ 2.44
TMEM53-205ENST00000372244 NUP155O75694 1391 aa30.3■■■□□ 2.44
TMEM53-205ENST00000372244 NOS1P29475 1434 aa30.29■■■□□ 2.44
TMEM53-205ENST00000372244 RPRD2Q5VT52 1461 aaKnown RBP30.28■■■□□ 2.44
TMEM53-205ENST00000372244 IDI1Q13907 227 aa30.27■■■□□ 2.44
TMEM53-205ENST00000372244 ANKLE2Q86XL3 938 aa30.27■■■□□ 2.44
TMEM53-205ENST00000372244 HFM1A2PYH4 1435 aa30.24■■■□□ 2.43
TMEM53-205ENST00000372244 SLC52A1Q9NWF4 448 aa30.24■■■□□ 2.43
TMEM53-205ENST00000372244 TET3O43151 1660 aa30.22■■■□□ 2.43
TMEM53-205ENST00000372244 IQGAP3Q86VI3 1631 aa30.19■■■□□ 2.42
TMEM53-205ENST00000372244 CERKQ8TCT0 537 aa30.19■■■□□ 2.42
TMEM53-205ENST00000372244 SYNMO15061 1565 aa30.18■■■□□ 2.42
TMEM53-205ENST00000372244 ILDR1Q86SU0 546 aaPredicted RBP30.17■■■□□ 2.42
TMEM53-205ENST00000372244 UBR1Q8IWV7 1749 aa30.16■■■□□ 2.42
TMEM53-205ENST00000372244 MED14O60244 1454 aa30.15■■■□□ 2.42
TMEM53-205ENST00000372244 GCC2Q8IWJ2 1684 aa30.15■■■□□ 2.42
TMEM53-205ENST00000372244 STAG3Q9UJ98 1225 aa30.13■■■□□ 2.41
TMEM53-205ENST00000372244 NEURL4Q96JN8 1562 aa30.13■■■□□ 2.41
TMEM53-205ENST00000372244 ARHGAP23Q9P227 1491 aa30.13■■■□□ 2.41
TMEM53-205ENST00000372244 LTKP29376 864 aa30.12■■■□□ 2.41
TMEM53-205ENST00000372244 PIK3C2BO00750 1634 aa30.11■■■□□ 2.41
TMEM53-205ENST00000372244 SLIT1O75093 1534 aa30.11■■■□□ 2.41
TMEM53-205ENST00000372244 TMEM2Q9UHN6 1383 aa30.11■■■□□ 2.41
TMEM53-205ENST00000372244 E9PCH4 1651 aa30.1■■■□□ 2.41
TMEM53-205ENST00000372244 TXNDC2Q86VQ3 553 aa30.1■■■□□ 2.41
TMEM53-205ENST00000372244 FBXO41Q8TF61 875 aa30.1■■■□□ 2.41
TMEM53-205ENST00000372244 ZNF335Q9H4Z2 1342 aaPredicted RBP30.09■■■□□ 2.41
TMEM53-205ENST00000372244 LTBP4Q8N2S1 1624 aa30.09■■■□□ 2.41
TMEM53-205ENST00000372244 NPHP4O75161 1426 aaPredicted RBP30.09■■■□□ 2.41
TMEM53-205ENST00000372244 POLR1AO95602 1720 aaPredicted RBP30.08■■■□□ 2.41
TMEM53-205ENST00000372244 KDM5AP29375 1690 aaKnown RBP30.08■■■□□ 2.41
TMEM53-205ENST00000372244 EID1Q9Y6B2 187 aa30.06■■■□□ 2.4
TMEM53-205ENST00000372244 TRIM52Q96A61 297 aa30.05■■■□□ 2.4
TMEM53-205ENST00000372244 SCAF11Q99590 1463 aaKnown RBP30.04■■■□□ 2.4
TMEM53-205ENST00000372244 ADGRB3O60242 1522 aa30.01■■■□□ 2.39
TMEM53-205ENST00000372244 SLC4A1APQ9BWU0 796 aaKnown RBP29.97■■■□□ 2.39
TMEM53-205ENST00000372244 IQGAP1P46940 1657 aa29.96■■■□□ 2.39
TMEM53-205ENST00000372244 TMEM131LA2VDJ0 1609 aa29.94■■■□□ 2.38
TMEM53-205ENST00000372244 SETD5Q9C0A6 1442 aa29.93■■■□□ 2.38
TMEM53-205ENST00000372244 ACIN1Q9UKV3 1341 aaKnown RBP29.93■■■□□ 2.38
TMEM53-205ENST00000372244 CHGAP10645 457 aaKnown RBP29.93■■■□□ 2.38
TMEM53-205ENST00000372244 HDGFP51858 240 aaKnown RBP29.93■■■□□ 2.38
TMEM53-205ENST00000372244 ZFYVE9O95405 1425 aa29.92■■■□□ 2.38
TMEM53-205ENST00000372244 IQSEC2Q5JU85 1478 aa29.91■■■□□ 2.38
TMEM53-205ENST00000372244 RIMS2Q9UQ26 1411 aa29.88■■■□□ 2.37
TMEM53-205ENST00000372244 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.87■■■□□ 2.37
TMEM53-205ENST00000372244 MPHOSPH9Q99550 1183 aa29.87■■■□□ 2.37
TMEM53-205ENST00000372244 SPHKAPQ2M3C7 1700 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms