RNA–Protein interactions for RNA: ENST00000371335.4

LAMP2-202, Transcript of lysosomal associated membrane protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMP2, Length 4,030 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP2-202ENST00000371335 KDM5CP41229 1560 aa10.92□□□□□ -0.66
LAMP2-202ENST00000371335 TONSLQ96HA7 1378 aa10.92□□□□□ -0.66
LAMP2-202ENST00000371335 IFT172Q9UG01 1749 aa10.91□□□□□ -0.66
LAMP2-202ENST00000371335 RRP7BPQ9NSQ0 103 aa10.91□□□□□ -0.66
LAMP2-202ENST00000371335 RPRD2Q5VT52 1461 aaKnown RBP10.91□□□□□ -0.66
LAMP2-202ENST00000371335 SKAP1Q86WV1 359 aa10.9□□□□□ -0.66
LAMP2-202ENST00000371335 MROH1Q8NDA8 1641 aa10.9□□□□□ -0.66
LAMP2-202ENST00000371335 VWDEQ8N2E2 1590 aa10.9□□□□□ -0.66
LAMP2-202ENST00000371335 NBPF8Q3BBV2 869 aa10.9□□□□□ -0.66
LAMP2-202ENST00000371335 ARAP3Q8WWN8 1544 aa10.9□□□□□ -0.66
LAMP2-202ENST00000371335 TRPM1Q7Z4N2 1603 aa10.89□□□□□ -0.67
LAMP2-202ENST00000371335 NCOA1Q15788 1441 aa10.88□□□□□ -0.67
LAMP2-202ENST00000371335 INO80Q9ULG1 1556 aaPredicted RBP10.88□□□□□ -0.67
LAMP2-202ENST00000371335 ERCC6Q03468 1493 aa10.88□□□□□ -0.67
LAMP2-202ENST00000371335 ARHGEF12Q9NZN5 1544 aa10.88□□□□□ -0.67
LAMP2-202ENST00000371335 PRKRIP1Q9H875 184 aaPredicted RBP10.87□□□□□ -0.67
LAMP2-202ENST00000371335 ANKRD30BQ9BXX2 1392 aa10.86□□□□□ -0.67
LAMP2-202ENST00000371335 ABCC1P33527 1531 aa10.86□□□□□ -0.67
LAMP2-202ENST00000371335 ARID3CA6NKF2 412 aa10.86□□□□□ -0.67
LAMP2-202ENST00000371335 HSP90AA1P07900 732 aaKnown RBP10.86□□□□□ -0.67
LAMP2-202ENST00000371335 HSP90AA2PQ14568 343 aaPredicted RBP10.86□□□□□ -0.67
LAMP2-202ENST00000371335 L3MBTL2Q969R5 705 aa10.85□□□□□ -0.67
LAMP2-202ENST00000371335 MTUS2Q5JR59 1369 aa10.85□□□□□ -0.67
LAMP2-202ENST00000371335 CEP152O94986 1710 aa10.85□□□□□ -0.67
LAMP2-202ENST00000371335 NEURL4Q96JN8 1562 aa10.84□□□□□ -0.67
LAMP2-202ENST00000371335 PPP4R2Q9NY27 417 aa10.84□□□□□ -0.67
LAMP2-202ENST00000371335 UBE2Q2Q8WVN8 375 aa10.83□□□□□ -0.68
LAMP2-202ENST00000371335 MRS2Q9HD23 443 aa10.81□□□□□ -0.68
LAMP2-202ENST00000371335 UHRF1BP1Q6BDS2 1440 aa10.81□□□□□ -0.68
LAMP2-202ENST00000371335 BRPF3Q9ULD4 1205 aa10.81□□□□□ -0.68
LAMP2-202ENST00000371335 CNTLNQ9NXG0 1405 aa10.81□□□□□ -0.68
LAMP2-202ENST00000371335 SPHKAPQ2M3C7 1700 aa10.81□□□□□ -0.68
LAMP2-202ENST00000371335 PPM1GO15355 546 aaPredicted RBP10.81□□□□□ -0.68
LAMP2-202ENST00000371335 ATP10AO60312 1499 aa10.8□□□□□ -0.68
LAMP2-202ENST00000371335 KIF7Q2M1P5 1343 aa10.8□□□□□ -0.68
LAMP2-202ENST00000371335 TRIM44Q96DX7 344 aaPredicted RBP10.8□□□□□ -0.68
LAMP2-202ENST00000371335 IQGAP1P46940 1657 aa10.8□□□□□ -0.68
LAMP2-202ENST00000371335 ZFYVE16Q7Z3T8 1539 aa10.8□□□□□ -0.68
LAMP2-202ENST00000371335 EIF2AK4Q9P2K8 1649 aaKnown RBP10.8□□□□□ -0.68
LAMP2-202ENST00000371335 CDK11BP21127 795 aaKnown RBP10.8□□□□□ -0.68
LAMP2-202ENST00000371335 CCDC7Q96M83 1385 aa10.79□□□□□ -0.68
LAMP2-202ENST00000371335 PLA2R1Q13018 1463 aa10.79□□□□□ -0.68
LAMP2-202ENST00000371335 ANP32BQ92688 251 aaKnown RBP10.79□□□□□ -0.68
LAMP2-202ENST00000371335 PNNQ9H307 717 aaKnown RBP10.79□□□□□ -0.68
LAMP2-202ENST00000371335 SYCP2Q9BX26 1530 aa10.79□□□□□ -0.68
LAMP2-202ENST00000371335 TNNT2P45379 298 aaPredicted RBP10.79□□□□□ -0.68
LAMP2-202ENST00000371335 ZBTB7CA1YPR0 619 aa10.78□□□□□ -0.68
LAMP2-202ENST00000371335 MYOM1P52179 1685 aa10.77□□□□□ -0.69
LAMP2-202ENST00000371335 ZBED9Q6R2W3 1325 aa10.77□□□□□ -0.69
LAMP2-202ENST00000371335 KIDINS220Q9ULH0 1771 aa10.77□□□□□ -0.69
LAMP2-202ENST00000371335 ZC3H13Q5T200 1668 aaKnown RBP10.77□□□□□ -0.69
LAMP2-202ENST00000371335 ZNF644Q9H582 1327 aaPredicted RBP10.77□□□□□ -0.69
LAMP2-202ENST00000371335 DHX29Q7Z478 1369 aaKnown RBP10.76□□□□□ -0.69
LAMP2-202ENST00000371335 MPHOSPH9Q99550 1183 aa10.75□□□□□ -0.69
LAMP2-202ENST00000371335 FAM135AQ9P2D6 1515 aa10.75□□□□□ -0.69
LAMP2-202ENST00000371335 EIF4G2P78344 907 aaKnown RBP eCLIP10.74□□□□□ -0.694e-13■□□□□ 11
LAMP2-202ENST00000371335 KIAA1210Q9ULL0 1709 aa10.74□□□□□ -0.69
LAMP2-202ENST00000371335 RSPH6AQ9H0K4 717 aa10.74□□□□□ -0.69
LAMP2-202ENST00000371335 MADDQ8WXG6 1647 aa10.74□□□□□ -0.69
LAMP2-202ENST00000371335 MROH2AA6NES4 1674 aa10.73□□□□□ -0.69
LAMP2-202ENST00000371335 FRMPD1Q5SYB0 1578 aa10.73□□□□□ -0.69
LAMP2-202ENST00000371335 PRDM15P57071 1507 aaPredicted RBP10.73□□□□□ -0.69
LAMP2-202ENST00000371335 CARMIL2Q6F5E8 1435 aa10.73□□□□□ -0.69
LAMP2-202ENST00000371335 KIAA1107Q9UPP5 1409 aa10.73□□□□□ -0.69
LAMP2-202ENST00000371335 ZNF326Q5BKZ1 582 aaKnown RBP10.73□□□□□ -0.69
LAMP2-202ENST00000371335 PPRC1Q5VV67 1664 aaKnown RBP10.73□□□□□ -0.69
LAMP2-202ENST00000371335 GZF1Q9H116 711 aaPredicted RBP10.72□□□□□ -0.69
LAMP2-202ENST00000371335 SIGLEC1Q9BZZ2 1709 aa10.72□□□□□ -0.69
LAMP2-202ENST00000371335 RNF123Q5XPI4 1314 aa10.72□□□□□ -0.69
LAMP2-202ENST00000371335 ZMYND15Q9H091 742 aa10.72□□□□□ -0.69
LAMP2-202ENST00000371335 JPH4Q96JJ6 628 aa10.72□□□□□ -0.69
LAMP2-202ENST00000371335 TET3O43151 1660 aa10.72□□□□□ -0.69
LAMP2-202ENST00000371335 CCDC141Q6ZP82 1450 aa10.71□□□□□ -0.69
LAMP2-202ENST00000371335 SLC4A3P48751 1232 aa10.71□□□□□ -0.69
LAMP2-202ENST00000371335 RALGAPBQ86X10 1494 aa10.71□□□□□ -0.69
LAMP2-202ENST00000371335 C9orf84Q5VXU9 1444 aa10.71□□□□□ -0.69
LAMP2-202ENST00000371335 MYO3AQ8NEV4 1616 aa10.71□□□□□ -0.69
LAMP2-202ENST00000371335 IPO9Q96P70 1041 aaKnown RBP10.7□□□□□ -0.7
LAMP2-202ENST00000371335 RICTORQ6R327 1708 aa10.7□□□□□ -0.7
LAMP2-202ENST00000371335 MAP3K4Q9Y6R4 1608 aa10.7□□□□□ -0.7
LAMP2-202ENST00000371335 PIK3C2BO00750 1634 aa10.69□□□□□ -0.7
LAMP2-202ENST00000371335 EXOC6Q8TAG9 804 aa10.69□□□□□ -0.7
LAMP2-202ENST00000371335 CLTCL1P53675 1640 aa10.69□□□□□ -0.7
LAMP2-202ENST00000371335 WDR7Q9Y4E6 1490 aa10.68□□□□□ -0.7
LAMP2-202ENST00000371335 USP35Q9P2H5 1018 aa10.68□□□□□ -0.7
LAMP2-202ENST00000371335 SMG6Q86US8 1419 aaKnown RBP10.67□□□□□ -0.7
LAMP2-202ENST00000371335 DUOX2Q9NRD8 1548 aa10.67□□□□□ -0.7
LAMP2-202ENST00000371335 PLIN1O60240 522 aa10.67□□□□□ -0.7
LAMP2-202ENST00000371335 TRPM2O94759 1503 aa10.67□□□□□ -0.7
LAMP2-202ENST00000371335 PNISRQ8TF01 805 aaKnown RBP10.67□□□□□ -0.7
LAMP2-202ENST00000371335 SPRYD3Q8NCJ5 442 aa10.66□□□□□ -0.7
LAMP2-202ENST00000371335 CDCA7LQ96GN5 454 aa10.66□□□□□ -0.7
LAMP2-202ENST00000371335 PLCH2O75038 1416 aa10.66□□□□□ -0.7
LAMP2-202ENST00000371335 DNTTIP2Q5QJE6 756 aaKnown RBP10.66□□□□□ -0.7
LAMP2-202ENST00000371335 ZNF518AQ6AHZ1 1483 aa10.66□□□□□ -0.7
LAMP2-202ENST00000371335 NUDCQ9Y266 331 aa10.66□□□□□ -0.7
LAMP2-202ENST00000371335 LMTK2Q8IWU2 1503 aa10.65□□□□□ -0.7
LAMP2-202ENST00000371335 ERBINQ96RT1 1412 aa10.65□□□□□ -0.7
LAMP2-202ENST00000371335 DDRGK1Q96HY6 314 aa10.65□□□□□ -0.71
LAMP2-202ENST00000371335 PPLO60437 1756 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms