RNA–Protein interactions for RNA: ENST00000370536.4

SOX3-201, Transcript of SRY-box 3, humanhuman

APPRIS P1 BASIC

Gene SOX3, Length 2,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3-201ENST00000370536 PLA2R1Q13018 1463 aa29.02■■■□□ 2.24
SOX3-201ENST00000370536 MAGI2Q86UL8 1455 aa29.02■■■□□ 2.24
SOX3-201ENST00000370536 DCAF11Q8TEB1 546 aa29.02■■■□□ 2.24
SOX3-201ENST00000370536 ASXL2Q76L83 1435 aa29.01■■■□□ 2.23
SOX3-201ENST00000370536 ABCA9Q8IUA7 1624 aa29.01■■■□□ 2.23
SOX3-201ENST00000370536 FANCAO15360 1455 aa29■■■□□ 2.23
SOX3-201ENST00000370536 POLR1AO95602 1720 aaPredicted RBP28.99■■■□□ 2.23
SOX3-201ENST00000370536 KDM5CP41229 1560 aa28.99■■■□□ 2.23
SOX3-201ENST00000370536 RTEL1-TNFRSF6BF6WH68 1400 aa28.98■■■□□ 2.23
SOX3-201ENST00000370536 ZFYVE16Q7Z3T8 1539 aa28.97■■■□□ 2.23
SOX3-201ENST00000370536 CARD11Q9BXL7 1154 aa28.96■■■□□ 2.23
SOX3-201ENST00000370536 BCORL1Q5H9F3 1711 aa28.94■■■□□ 2.22
SOX3-201ENST00000370536 RGL3Q3MIN7 710 aa28.91■■■□□ 2.22
SOX3-201ENST00000370536 ADGRL1O94910 1474 aa28.89■■■□□ 2.22
SOX3-201ENST00000370536 SCAPERQ9BY12 1400 aa28.89■■■□□ 2.21
SOX3-201ENST00000370536 PRKRIP1Q9H875 184 aaPredicted RBP28.88■■■□□ 2.21
SOX3-201ENST00000370536 ATP10AO60312 1499 aa28.88■■■□□ 2.21
SOX3-201ENST00000370536 NPM1P06748 294 aaKnown RBP eCLIP28.88■■■□□ 2.21
SOX3-201ENST00000370536 ATP7AQ04656 1500 aa28.87■■■□□ 2.21
SOX3-201ENST00000370536 PRAG1Q86YV5 1406 aa28.87■■■□□ 2.21
SOX3-201ENST00000370536 A2MP01023 1474 aa28.86■■■□□ 2.21
SOX3-201ENST00000370536 INO80Q9ULG1 1556 aaPredicted RBP28.86■■■□□ 2.21
SOX3-201ENST00000370536 POLR3GLQ9BT43 218 aa28.85■■■□□ 2.21
SOX3-201ENST00000370536 ROCK2O75116 1388 aaKnown RBP28.85■■■□□ 2.21
SOX3-201ENST00000370536 ARID4BQ4LE39 1312 aaPredicted RBP28.83■■■□□ 2.21
SOX3-201ENST00000370536 MYT1LQ9UL68 1186 aa28.82■■■□□ 2.2
SOX3-201ENST00000370536 ST20-MTHFSA0A0A6YYL1 179 aa28.81■■■□□ 2.2
SOX3-201ENST00000370536 CCDC184Q52MB2 194 aa28.81■■■□□ 2.2
SOX3-201ENST00000370536 TRPM1Q7Z4N2 1603 aa28.8■■■□□ 2.2
SOX3-201ENST00000370536 DEPDC5O75140 1603 aa28.78■■■□□ 2.2
SOX3-201ENST00000370536 E9PCH4 1651 aa28.77■■■□□ 2.2
SOX3-201ENST00000370536 DHX29Q7Z478 1369 aaKnown RBP28.76■■■□□ 2.2
SOX3-201ENST00000370536 NBPF1Q3BBV0 1214 aa28.75■■■□□ 2.19
SOX3-201ENST00000370536 KIF3BO15066 747 aa28.74■■■□□ 2.19
SOX3-201ENST00000370536 HNRNPUQ00839 825 aaKnown RBP eCLIP28.73■■■□□ 2.19
SOX3-201ENST00000370536 CD109Q6YHK3 1445 aa28.71■■■□□ 2.19
SOX3-201ENST00000370536 KANK1Q14678 1352 aa28.71■■■□□ 2.19
SOX3-201ENST00000370536 GPRASP1Q5JY77 1395 aa28.71■■■□□ 2.19
SOX3-201ENST00000370536 MRS2Q9HD23 443 aa28.7■■■□□ 2.19
SOX3-201ENST00000370536 TSHZ2Q9NRE2 1034 aa28.7■■■□□ 2.19
SOX3-201ENST00000370536 TRPM2O94759 1503 aa28.69■■■□□ 2.18
SOX3-201ENST00000370536 VWDEQ8N2E2 1590 aa28.69■■■□□ 2.18
SOX3-201ENST00000370536 TET3O43151 1660 aa28.68■■■□□ 2.18
SOX3-201ENST00000370536 ZNF518AQ6AHZ1 1483 aa28.68■■■□□ 2.18
SOX3-201ENST00000370536 PTPRTO14522 1441 aa28.68■■■□□ 2.18
SOX3-201ENST00000370536 KIDINS220Q9ULH0 1771 aa28.67■■■□□ 2.18
SOX3-201ENST00000370536 EIF2AK4Q9P2K8 1649 aaKnown RBP28.67■■■□□ 2.18
SOX3-201ENST00000370536 SPHKAPQ2M3C7 1700 aa28.65■■■□□ 2.18
SOX3-201ENST00000370536 CNGB1Q14028 1251 aaPredicted RBP28.65■■■□□ 2.18
SOX3-201ENST00000370536 MROH1Q8NDA8 1641 aa28.64■■■□□ 2.18
SOX3-201ENST00000370536 PRDM15P57071 1507 aaPredicted RBP28.64■■■□□ 2.18
SOX3-201ENST00000370536 LAMC1P11047 1609 aa28.63■■■□□ 2.17
SOX3-201ENST00000370536 FAM9BQ8IZU0 186 aa28.63■■■□□ 2.17
SOX3-201ENST00000370536 CFAP74Q9C0B2 1584 aa28.62■■■□□ 2.17
SOX3-201ENST00000370536 CLTCL1P53675 1640 aa28.62■■■□□ 2.17
SOX3-201ENST00000370536 POGZQ7Z3K3 1410 aa28.6■■■□□ 2.17
SOX3-201ENST00000370536 CEP152O94986 1710 aa28.58■■■□□ 2.17
SOX3-201ENST00000370536 FKBP8Q14318 412 aa28.56■■■□□ 2.16
SOX3-201ENST00000370536 MADDQ8WXG6 1647 aa28.54■■■□□ 2.16
SOX3-201ENST00000370536 RNF17Q9BXT8 1623 aaKnown RBP28.54■■■□□ 2.16
SOX3-201ENST00000370536 TESK2Q96S53 571 aa28.54■■■□□ 2.16
SOX3-201ENST00000370536 MLH3Q9UHC1 1453 aa28.53■■■□□ 2.16
SOX3-201ENST00000370536 COL17A1Q9UMD9 1497 aaPredicted RBP28.51■■■□□ 2.15
SOX3-201ENST00000370536 EFCAB6Q5THR3 1501 aa28.51■■■□□ 2.15
SOX3-201ENST00000370536 HECW2Q9P2P5 1572 aa28.49■■■□□ 2.15
SOX3-201ENST00000370536 DISP3Q9P2K9 1392 aa28.49■■■□□ 2.15
SOX3-201ENST00000370536 NEFLP07196 543 aa28.49■■■□□ 2.15
SOX3-201ENST00000370536 FRMPD1Q5SYB0 1578 aa28.48■■■□□ 2.15
SOX3-201ENST00000370536 STAC3Q96MF2 364 aa28.48■■■□□ 2.15
SOX3-201ENST00000370536 UGGT1Q9NYU2 1555 aa28.47■■■□□ 2.15
SOX3-201ENST00000370536 PPRC1Q5VV67 1664 aaKnown RBP28.47■■■□□ 2.15
SOX3-201ENST00000370536 NEO1Q92859 1461 aa28.47■■■□□ 2.15
SOX3-201ENST00000370536 LMTK2Q8IWU2 1503 aa28.47■■■□□ 2.15
SOX3-201ENST00000370536 BCANQ96GW7 911 aa28.46■■■□□ 2.15
SOX3-201ENST00000370536 RAPGEF3O95398 923 aa28.45■■■□□ 2.14
SOX3-201ENST00000370536 ANP32EQ9BTT0 268 aa28.44■■■□□ 2.14
SOX3-201ENST00000370536 CYB5RLQ6IPT4 315 aa28.43■■■□□ 2.14
SOX3-201ENST00000370536 ABCA6Q8N139 1617 aa28.43■■■□□ 2.14
SOX3-201ENST00000370536 ZBED9Q6R2W3 1325 aa28.42■■■□□ 2.14
SOX3-201ENST00000370536 TMF1P82094 1093 aa28.42■■■□□ 2.14
SOX3-201ENST00000370536 NEURL4Q96JN8 1562 aa28.42■■■□□ 2.14
SOX3-201ENST00000370536 GGT6Q6P531 493 aa28.42■■■□□ 2.14
SOX3-201ENST00000370536 RALBP1Q15311 655 aa28.39■■■□□ 2.14
SOX3-201ENST00000370536 KTN1Q86UP2 1357 aaKnown RBP28.39■■■□□ 2.14
SOX3-201ENST00000370536 IQGAP1P46940 1657 aa28.39■■■□□ 2.14
SOX3-201ENST00000370536 TMC1Q8TDI8 760 aa28.38■■■□□ 2.13
SOX3-201ENST00000370536 MYBBP1AQ9BQG0 1328 aaKnown RBP28.37■■■□□ 2.13
SOX3-201ENST00000370536 SCAF11Q99590 1463 aaKnown RBP28.36■■■□□ 2.13
SOX3-201ENST00000370536 PER1O15534 1290 aaPredicted RBP28.36■■■□□ 2.13
SOX3-201ENST00000370536 PNISRQ8TF01 805 aaKnown RBP28.35■■■□□ 2.13
SOX3-201ENST00000370536 KIF1BO60333 1816 aa28.35■■■□□ 2.13
SOX3-201ENST00000370536 NPATQ14207 1427 aa28.35■■■□□ 2.13
SOX3-201ENST00000370536 MAP3K4Q9Y6R4 1608 aa28.34■■■□□ 2.13
SOX3-201ENST00000370536 MYOM2P54296 1465 aa28.33■■■□□ 2.13
SOX3-201ENST00000370536 BRD4O60885 1362 aaPredicted RBP28.32■■■□□ 2.12
SOX3-201ENST00000370536 PANK3Q9H999 370 aa28.32■■■□□ 2.12
SOX3-201ENST00000370536 ADGRF5Q8IZF2 1346 aa28.32■■■□□ 2.12
SOX3-201ENST00000370536 MROH2AA6NES4 1674 aa28.32■■■□□ 2.12
SOX3-201ENST00000370536 PARD3Q8TEW0 1356 aa28.31■■■□□ 2.12
SOX3-201ENST00000370536 DIP2CQ9Y2E4 1556 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms