RNA–Protein interactions for RNA: ENST00000370532.3

CDR1-201, Transcript of cerebellar degeneration related protein 1, humanhuman

APPRIS P1 BASIC

Gene CDR1, Length 2,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-201ENST00000370532 EHBP1L1Q8N3D4 1523 aa6.59□□□□□ -1.35
CDR1-201ENST00000370532 MAP3K1Q13233 1512 aa6.59□□□□□ -1.36
CDR1-201ENST00000370532 INO80Q9ULG1 1556 aaPredicted RBP6.58□□□□□ -1.36
CDR1-201ENST00000370532 UBTFP17480 764 aaKnown RBP6.58□□□□□ -1.36
CDR1-201ENST00000370532 PLXNC1O60486 1568 aa6.58□□□□□ -1.36
CDR1-201ENST00000370532 ABCA6Q8N139 1617 aa6.58□□□□□ -1.36
CDR1-201ENST00000370532 ZNF142P52746 1687 aaPredicted RBP6.58□□□□□ -1.36
CDR1-201ENST00000370532 KIDINS220Q9ULH0 1771 aa6.58□□□□□ -1.36
CDR1-201ENST00000370532 RTEL1-TNFRSF6BF6WH68 1400 aa6.57□□□□□ -1.36
CDR1-201ENST00000370532 SIGLEC1Q9BZZ2 1709 aa6.57□□□□□ -1.36
CDR1-201ENST00000370532 PTPRTO14522 1441 aa6.57□□□□□ -1.36
CDR1-201ENST00000370532 SAMD9LQ8IVG5 1584 aa6.56□□□□□ -1.36
CDR1-201ENST00000370532 CEP162Q5TB80 1403 aa6.55□□□□□ -1.36
CDR1-201ENST00000370532 YEATS2Q9ULM3 1422 aa6.55□□□□□ -1.36
CDR1-201ENST00000370532 P3H3Q8IVL6 736 aa6.55□□□□□ -1.36
CDR1-201ENST00000370532 ARHGEF5Q12774 1597 aa6.55□□□□□ -1.36
CDR1-201ENST00000370532 C3P01024 1663 aa6.55□□□□□ -1.36
CDR1-201ENST00000370532 FBXO41Q8TF61 875 aa6.55□□□□□ -1.36
CDR1-201ENST00000370532 SUPT16HQ9Y5B9 1047 aaKnown RBP6.55□□□□□ -1.36
CDR1-201ENST00000370532 MAST1Q9Y2H9 1570 aa6.55□□□□□ -1.36
CDR1-201ENST00000370532 RAPGEF3O95398 923 aa6.54□□□□□ -1.36
CDR1-201ENST00000370532 ATP7AQ04656 1500 aa6.54□□□□□ -1.36
CDR1-201ENST00000370532 GPATCH8Q9UKJ3 1502 aaKnown RBP6.54□□□□□ -1.36
CDR1-201ENST00000370532 RSPH4AQ5TD94 716 aa6.54□□□□□ -1.36
CDR1-201ENST00000370532 IFNLR1Q8IU57 520 aaPredicted RBP6.54□□□□□ -1.36
CDR1-201ENST00000370532 PLA2R1Q13018 1463 aa6.54□□□□□ -1.36
CDR1-201ENST00000370532 SUPT6HQ7KZ85 1726 aaKnown RBP6.53□□□□□ -1.36
CDR1-201ENST00000370532 ZC3H13Q5T200 1668 aaKnown RBP6.53□□□□□ -1.36
CDR1-201ENST00000370532 DSG3P32926 999 aa6.53□□□□□ -1.36
CDR1-201ENST00000370532 EIF2AK4Q9P2K8 1649 aaKnown RBP6.53□□□□□ -1.36
CDR1-201ENST00000370532 UHRF1BP1Q6BDS2 1440 aa6.53□□□□□ -1.36
CDR1-201ENST00000370532 TRAPPC8Q9Y2L5 1435 aa6.53□□□□□ -1.36
CDR1-201ENST00000370532 PROM2Q8N271 834 aa6.52□□□□□ -1.37
CDR1-201ENST00000370532 TIAM1Q13009 1591 aa6.52□□□□□ -1.37
CDR1-201ENST00000370532 STRCQ7RTU9 1775 aa6.51□□□□□ -1.37
CDR1-201ENST00000370532 PKNOX2Q96KN3 472 aa6.51□□□□□ -1.37
CDR1-201ENST00000370532 RNF17Q9BXT8 1623 aaKnown RBP6.5□□□□□ -1.37
CDR1-201ENST00000370532 C1QBPQ07021 282 aaKnown RBP6.5□□□□□ -1.37
CDR1-201ENST00000370532 SYCP2Q9BX26 1530 aa6.5□□□□□ -1.37
CDR1-201ENST00000370532 KDM5DQ9BY66 1539 aa6.5□□□□□ -1.37
CDR1-201ENST00000370532 ARID4BQ4LE39 1312 aaPredicted RBP6.5□□□□□ -1.37
CDR1-201ENST00000370532 A2MP01023 1474 aa6.5□□□□□ -1.37
CDR1-201ENST00000370532 RANGAP1P46060 587 aaPredicted RBP6.49□□□□□ -1.37
CDR1-201ENST00000370532 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.49□□□□□ -1.37
CDR1-201ENST00000370532 MYO3AQ8NEV4 1616 aa6.49□□□□□ -1.37
CDR1-201ENST00000370532 CCNB3Q8WWL7 1395 aa6.49□□□□□ -1.37
CDR1-201ENST00000370532 ILDR1Q86SU0 546 aaPredicted RBP6.49□□□□□ -1.37
CDR1-201ENST00000370532 PODXL2Q9NZ53 605 aa6.49□□□□□ -1.37
CDR1-201ENST00000370532 NCOA1Q15788 1441 aa6.49□□□□□ -1.37
CDR1-201ENST00000370532 MIA2Q96PC5 1412 aa6.49□□□□□ -1.37
CDR1-201ENST00000370532 CCDC141Q6ZP82 1450 aa6.48□□□□□ -1.37
CDR1-201ENST00000370532 MBD5Q9P267 1494 aa6.48□□□□□ -1.37
CDR1-201ENST00000370532 KDM5AP29375 1690 aaKnown RBP6.48□□□□□ -1.37
CDR1-201ENST00000370532 DEPDC5O75140 1603 aa6.48□□□□□ -1.37
CDR1-201ENST00000370532 SHANK2Q9UPX8 1470 aa6.47□□□□□ -1.37
CDR1-201ENST00000370532 VASPP50552 380 aaPredicted RBP6.47□□□□□ -1.37
CDR1-201ENST00000370532 CLTCQ00610 1675 aaKnown RBP6.47□□□□□ -1.37
CDR1-201ENST00000370532 A2ML1A8K2U0 1454 aa6.47□□□□□ -1.37
CDR1-201ENST00000370532 TCOF1Q13428 1488 aaKnown RBP6.47□□□□□ -1.37
CDR1-201ENST00000370532 POLR1AO95602 1720 aaPredicted RBP6.47□□□□□ -1.37
CDR1-201ENST00000370532 SPAG9O60271 1321 aaKnown RBP6.46□□□□□ -1.37
CDR1-201ENST00000370532 CEP170BQ9Y4F5 1589 aaPredicted RBP6.46□□□□□ -1.37
CDR1-201ENST00000370532 MTUS2Q5JR59 1369 aa6.46□□□□□ -1.37
CDR1-201ENST00000370532 PTPRKQ15262 1439 aa6.46□□□□□ -1.37
CDR1-201ENST00000370532 NLRP1Q9C000 1473 aa6.46□□□□□ -1.38
CDR1-201ENST00000370532 DEKP35659 375 aaKnown RBP6.46□□□□□ -1.38
CDR1-201ENST00000370532 LTBP4Q8N2S1 1624 aa6.46□□□□□ -1.38
CDR1-201ENST00000370532 DHX29Q7Z478 1369 aaKnown RBP6.46□□□□□ -1.38
CDR1-201ENST00000370532 PZPP20742 1482 aa6.46□□□□□ -1.38
CDR1-201ENST00000370532 PKD2Q13563 968 aa6.45□□□□□ -1.38
CDR1-201ENST00000370532 VPS8Q8N3P4 1428 aa6.45□□□□□ -1.38
CDR1-201ENST00000370532 CROCC2H7BZ55 1655 aa6.45□□□□□ -1.38
CDR1-201ENST00000370532 ARID3CA6NKF2 412 aa6.45□□□□□ -1.38
CDR1-201ENST00000370532 MIER1Q8N108 512 aa6.45□□□□□ -1.38
CDR1-201ENST00000370532 CPS1P31327 1500 aa6.45□□□□□ -1.38
CDR1-201ENST00000370532 CAMSAP2Q08AD1 1489 aa6.44□□□□□ -1.38
CDR1-201ENST00000370532 NCOA2Q15596 1464 aa6.44□□□□□ -1.38
CDR1-201ENST00000370532 ESF1Q9H501 851 aaKnown RBP6.44□□□□□ -1.38
CDR1-201ENST00000370532 SPATA31D1Q6ZQQ2 1576 aa6.43□□□□□ -1.38
CDR1-201ENST00000370532 MED14O60244 1454 aa6.43□□□□□ -1.38
CDR1-201ENST00000370532 CERKQ8TCT0 537 aa6.43□□□□□ -1.38
CDR1-201ENST00000370532 CFDP1Q9UEE9 299 aaPredicted RBP6.43□□□□□ -1.38
CDR1-201ENST00000370532 RBM19Q9Y4C8 960 aaKnown RBP6.43□□□□□ -1.38
CDR1-201ENST00000370532 CAMSAP1Q5T5Y3 1602 aa6.43□□□□□ -1.38
CDR1-201ENST00000370532 SYNMO15061 1565 aa6.43□□□□□ -1.38
CDR1-201ENST00000370532 DUOX2Q9NRD8 1548 aa6.43□□□□□ -1.38
CDR1-201ENST00000370532 LRRC9Q6ZRR7 1453 aa6.43□□□□□ -1.38
CDR1-201ENST00000370532 ARHGAP31Q2M1Z3 1444 aa6.43□□□□□ -1.38
CDR1-201ENST00000370532 ZMYM3Q14202 1370 aa6.43□□□□□ -1.38
CDR1-201ENST00000370532 AFAP1Q8N556 730 aa6.43□□□□□ -1.38
CDR1-201ENST00000370532 DNMT1P26358 1616 aaKnown RBP6.42□□□□□ -1.38
CDR1-201ENST00000370532 LMTK2Q8IWU2 1503 aa6.42□□□□□ -1.38
CDR1-201ENST00000370532 MYOM3Q5VTT5 1437 aa6.42□□□□□ -1.38
CDR1-201ENST00000370532 ERBINQ96RT1 1412 aa6.42□□□□□ -1.38
CDR1-201ENST00000370532 PRDM15P57071 1507 aaPredicted RBP6.41□□□□□ -1.38
CDR1-201ENST00000370532 ERICH6BQ5W0A0 696 aa6.41□□□□□ -1.38
CDR1-201ENST00000370532 PLSCR2Q9NRY7 297 aa6.41□□□□□ -1.38
CDR1-201ENST00000370532 MROH1Q8NDA8 1641 aa6.39□□□□□ -1.39
CDR1-201ENST00000370532 ATP1B4Q9UN42 357 aaPredicted RBP6.39□□□□□ -1.39
CDR1-201ENST00000370532 ABCC3O15438 1527 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms