RNA–Protein interactions for RNA: ENST00000370206.8

CNN3-201, Transcript of calponin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-201ENST00000370206 DUOX2Q9NRD8 1548 aa30.3■■■□□ 2.44
CNN3-201ENST00000370206 DCAF11Q8TEB1 546 aa30.3■■■□□ 2.44
CNN3-201ENST00000370206 CCDC144AA2RUR9 1427 aa30.29■■■□□ 2.44
CNN3-201ENST00000370206 ROCK2O75116 1388 aaKnown RBP30.29■■■□□ 2.44
CNN3-201ENST00000370206 KDM2AQ9Y2K7 1162 aa30.28■■■□□ 2.44
CNN3-201ENST00000370206 PLA2R1Q13018 1463 aa30.26■■■□□ 2.43
CNN3-201ENST00000370206 FAM9BQ8IZU0 186 aa30.25■■■□□ 2.43
CNN3-201ENST00000370206 MAGI2Q86UL8 1455 aa30.25■■■□□ 2.43
CNN3-201ENST00000370206 ERBINQ96RT1 1412 aa30.25■■■□□ 2.43
CNN3-201ENST00000370206 ABCC1P33527 1531 aa30.24■■■□□ 2.43
CNN3-201ENST00000370206 EFCAB2Q5VUJ9 269 aa30.22■■■□□ 2.43
CNN3-201ENST00000370206 PRAG1Q86YV5 1406 aa30.22■■■□□ 2.43
CNN3-201ENST00000370206 POLR3GLQ9BT43 218 aa30.21■■■□□ 2.43
CNN3-201ENST00000370206 ZBED9Q6R2W3 1325 aa30.21■■■□□ 2.43
CNN3-201ENST00000370206 TRPM1Q7Z4N2 1603 aa30.21■■■□□ 2.43
CNN3-201ENST00000370206 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.19■■■□□ 2.425e-7■■□□□ 11.9
CNN3-201ENST00000370206 ST20-MTHFSA0A0A6YYL1 179 aa30.18■■■□□ 2.42
CNN3-201ENST00000370206 ATP10AO60312 1499 aa30.18■■■□□ 2.42
CNN3-201ENST00000370206 ARAP3Q8WWN8 1544 aa30.16■■■□□ 2.42
CNN3-201ENST00000370206 A2MP01023 1474 aa30.16■■■□□ 2.42
CNN3-201ENST00000370206 TRAPPC8Q9Y2L5 1435 aa30.14■■■□□ 2.42
CNN3-201ENST00000370206 GPRASP1Q5JY77 1395 aa30.11■■■□□ 2.41
CNN3-201ENST00000370206 E9PCH4 1651 aa30.11■■■□□ 2.41
CNN3-201ENST00000370206 LAMC1P11047 1609 aa30.1■■■□□ 2.41
CNN3-201ENST00000370206 RGL3Q3MIN7 710 aa30.08■■■□□ 2.41
CNN3-201ENST00000370206 RTEL1-TNFRSF6BF6WH68 1400 aa30.07■■■□□ 2.4
CNN3-201ENST00000370206 EIF2AK4Q9P2K8 1649 aaKnown RBP30.06■■■□□ 2.4
CNN3-201ENST00000370206 ERICH6BQ5W0A0 696 aa30.04■■■□□ 2.4
CNN3-201ENST00000370206 ZFYVE16Q7Z3T8 1539 aa30.03■■■□□ 2.4
CNN3-201ENST00000370206 KTN1Q86UP2 1357 aaKnown RBP30.03■■■□□ 2.4
CNN3-201ENST00000370206 PRDM15P57071 1507 aaPredicted RBP30.03■■■□□ 2.4
CNN3-201ENST00000370206 SPAG9O60271 1321 aaKnown RBP30.02■■■□□ 2.4
CNN3-201ENST00000370206 WDR7Q9Y4E6 1490 aa30.02■■■□□ 2.4
CNN3-201ENST00000370206 NBPF1Q3BBV0 1214 aa30.01■■■□□ 2.39
CNN3-201ENST00000370206 CNGB1Q14028 1251 aaPredicted RBP30■■■□□ 2.39
CNN3-201ENST00000370206 IRX6P78412 446 aaPredicted RBP29.98■■■□□ 2.39
CNN3-201ENST00000370206 ABCA9Q8IUA7 1624 aa29.97■■■□□ 2.39
CNN3-201ENST00000370206 RALBP1Q15311 655 aa29.96■■■□□ 2.39
CNN3-201ENST00000370206 PNISRQ8TF01 805 aaKnown RBP29.96■■■□□ 2.39
CNN3-201ENST00000370206 COL17A1Q9UMD9 1497 aaPredicted RBP29.95■■■□□ 2.39
CNN3-201ENST00000370206 DEPDC5O75140 1603 aa29.95■■■□□ 2.38
CNN3-201ENST00000370206 AFAP1Q8N556 730 aa29.94■■■□□ 2.38
CNN3-201ENST00000370206 BRD4O60885 1362 aaPredicted RBP29.93■■■□□ 2.38
CNN3-201ENST00000370206 SMG6Q86US8 1419 aaKnown RBP29.93■■■□□ 2.38
CNN3-201ENST00000370206 TMC1Q8TDI8 760 aa29.93■■■□□ 2.38
CNN3-201ENST00000370206 MYBBP1AQ9BQG0 1328 aaKnown RBP29.93■■■□□ 2.38
CNN3-201ENST00000370206 RNF17Q9BXT8 1623 aaKnown RBP29.93■■■□□ 2.38
CNN3-201ENST00000370206 INO80Q9ULG1 1556 aaPredicted RBP29.92■■■□□ 2.38
CNN3-201ENST00000370206 FANCAO15360 1455 aa29.91■■■□□ 2.38
CNN3-201ENST00000370206 TRPM2O94759 1503 aa29.91■■■□□ 2.38
CNN3-201ENST00000370206 ATP7AQ04656 1500 aa29.9■■■□□ 2.38
CNN3-201ENST00000370206 TESK2Q96S53 571 aa29.89■■■□□ 2.38
CNN3-201ENST00000370206 LRPPRCP42704 1394 aaKnown RBP29.89■■■□□ 2.37
CNN3-201ENST00000370206 PTPRTO14522 1441 aa29.87■■■□□ 2.37
CNN3-201ENST00000370206 PPP4R2Q9NY27 417 aa29.87■■■□□ 2.37
CNN3-201ENST00000370206 SPHKAPQ2M3C7 1700 aa29.86■■■□□ 2.37
CNN3-201ENST00000370206 TET3O43151 1660 aa29.86■■■□□ 2.37
CNN3-201ENST00000370206 DISP3Q9P2K9 1392 aa29.85■■■□□ 2.37
CNN3-201ENST00000370206 PARD3Q8TEW0 1356 aa29.85■■■□□ 2.37
CNN3-201ENST00000370206 MADDQ8WXG6 1647 aa29.85■■■□□ 2.37
CNN3-201ENST00000370206 CEP152O94986 1710 aa29.84■■■□□ 2.37
CNN3-201ENST00000370206 VWDEQ8N2E2 1590 aa29.84■■■□□ 2.37
CNN3-201ENST00000370206 NUDCQ9Y266 331 aa29.83■■■□□ 2.37
CNN3-201ENST00000370206 ADGRL1O94910 1474 aa29.82■■■□□ 2.36
CNN3-201ENST00000370206 PER1O15534 1290 aaPredicted RBP29.81■■■□□ 2.36
CNN3-201ENST00000370206 CLTCL1P53675 1640 aa29.8■■■□□ 2.36
CNN3-201ENST00000370206 ASXL2Q76L83 1435 aa29.79■■■□□ 2.36
CNN3-201ENST00000370206 KANK1Q14678 1352 aa29.79■■■□□ 2.36
CNN3-201ENST00000370206 SCAPERQ9BY12 1400 aa29.79■■■□□ 2.36
CNN3-201ENST00000370206 WASHC2CQ9Y4E1 1318 aa29.78■■■□□ 2.36
CNN3-201ENST00000370206 TMF1P82094 1093 aa29.78■■■□□ 2.36
CNN3-201ENST00000370206 MYT1Q01538 1121 aa29.78■■■□□ 2.36
CNN3-201ENST00000370206 NLRP13Q86W25 1043 aa29.77■■■□□ 2.36
CNN3-201ENST00000370206 STAC3Q96MF2 364 aa29.77■■■□□ 2.36
CNN3-201ENST00000370206 RBM19Q9Y4C8 960 aaKnown RBP29.77■■■□□ 2.36
CNN3-201ENST00000370206 IQGAP1P46940 1657 aa29.76■■■□□ 2.36
CNN3-201ENST00000370206 RNF123Q5XPI4 1314 aa29.73■■■□□ 2.35
CNN3-201ENST00000370206 MROH1Q8NDA8 1641 aa29.73■■■□□ 2.35
CNN3-201ENST00000370206 NEURL4Q96JN8 1562 aa29.72■■■□□ 2.35
CNN3-201ENST00000370206 KIF3BO15066 747 aa29.7■■■□□ 2.35
CNN3-201ENST00000370206 PANK3Q9H999 370 aa29.69■■■□□ 2.34
CNN3-201ENST00000370206 SCAF11Q99590 1463 aaKnown RBP29.66■■■□□ 2.34
CNN3-201ENST00000370206 KIDINS220Q9ULH0 1771 aa29.66■■■□□ 2.34
CNN3-201ENST00000370206 MYT1LQ9UL68 1186 aa29.65■■■□□ 2.34
CNN3-201ENST00000370206 KIAA1210Q9ULL0 1709 aa29.64■■■□□ 2.33
CNN3-201ENST00000370206 ZNF518AQ6AHZ1 1483 aa29.62■■■□□ 2.33
CNN3-201ENST00000370206 EFCAB6Q5THR3 1501 aa29.62■■■□□ 2.33
CNN3-201ENST00000370206 CC2D1BQ5T0F9 858 aaKnown RBP29.62■■■□□ 2.33
CNN3-201ENST00000370206 B4GALNT3Q6L9W6 998 aa29.62■■■□□ 2.33
CNN3-201ENST00000370206 INSRP06213 1382 aa29.61■■■□□ 2.33
CNN3-201ENST00000370206 SENP3-EIF4A1A0A087X0R7 540 aa29.6■■■□□ 2.33
CNN3-201ENST00000370206 ZMYM4Q5VZL5 1548 aa29.6■■■□□ 2.33
CNN3-201ENST00000370206 LMTK2Q8IWU2 1503 aa29.58■■■□□ 2.33
CNN3-201ENST00000370206 MYOM2P54296 1465 aa29.58■■■□□ 2.33
CNN3-201ENST00000370206 SYNMO15061 1565 aa29.56■■■□□ 2.32
CNN3-201ENST00000370206 CFAP74Q9C0B2 1584 aa29.56■■■□□ 2.32
CNN3-201ENST00000370206 CDCA8Q53HL2 280 aa29.56■■■□□ 2.32
CNN3-201ENST00000370206 PPRC1Q5VV67 1664 aaKnown RBP29.55■■■□□ 2.32
CNN3-201ENST00000370206 UGGT1Q9NYU2 1555 aa29.55■■■□□ 2.32
CNN3-201ENST00000370206 MAP3K4Q9Y6R4 1608 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms