RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 GCC2Q8IWJ2 1684 aa23.36■■□□□ 1.33
PRPF38B-202ENST00000370022 ADAMTSL3P82987 1691 aa23.35■■□□□ 1.33
PRPF38B-202ENST00000370022 FAM135AQ9P2D6 1515 aa23.34■■□□□ 1.33
PRPF38B-202ENST00000370022 DEPDC5O75140 1603 aa23.32■■□□□ 1.32
PRPF38B-202ENST00000370022 ESF1Q9H501 851 aaKnown RBP23.31■■□□□ 1.32
PRPF38B-202ENST00000370022 CNTLNQ9NXG0 1405 aa23.31■■□□□ 1.32
PRPF38B-202ENST00000370022 PRDM15P57071 1507 aaPredicted RBP23.3■■□□□ 1.32
PRPF38B-202ENST00000370022 MADDQ8WXG6 1647 aa23.29■■□□□ 1.32
PRPF38B-202ENST00000370022 MROH1Q8NDA8 1641 aa23.29■■□□□ 1.32
PRPF38B-202ENST00000370022 FER1L4A9Z1Z3 1794 aa23.28■■□□□ 1.32
PRPF38B-202ENST00000370022 KANK1Q14678 1352 aa23.28■■□□□ 1.32
PRPF38B-202ENST00000370022 KDM5DQ9BY66 1539 aa23.27■■□□□ 1.32
PRPF38B-202ENST00000370022 ACIN1Q9UKV3 1341 aaKnown RBP23.26■■□□□ 1.31
PRPF38B-202ENST00000370022 WASHC2CQ9Y4E1 1318 aa23.26■■□□□ 1.31
PRPF38B-202ENST00000370022 UNC13BO14795 1591 aa23.26■■□□□ 1.31
PRPF38B-202ENST00000370022 SETD5Q9C0A6 1442 aa23.26■■□□□ 1.31
PRPF38B-202ENST00000370022 ZC3H13Q5T200 1668 aaKnown RBP23.25■■□□□ 1.31
PRPF38B-202ENST00000370022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.23■■□□□ 1.312e-6■□□□□ 11.2
PRPF38B-202ENST00000370022 VWDEQ8N2E2 1590 aa23.22■■□□□ 1.31
PRPF38B-202ENST00000370022 RIMS1Q86UR5 1692 aaKnown RBP23.22■■□□□ 1.31
PRPF38B-202ENST00000370022 MROH2AA6NES4 1674 aa23.22■■□□□ 1.31
PRPF38B-202ENST00000370022 ABCC3O15438 1527 aa23.21■■□□□ 1.31
PRPF38B-202ENST00000370022 CLTCQ00610 1675 aaKnown RBP23.21■■□□□ 1.31
PRPF38B-202ENST00000370022 PTPRMP28827 1452 aa23.2■■□□□ 1.31
PRPF38B-202ENST00000370022 LMTK2Q8IWU2 1503 aa23.2■■□□□ 1.3
PRPF38B-202ENST00000370022 NUP155O75694 1391 aa23.19■■□□□ 1.3
PRPF38B-202ENST00000370022 ZMYM3Q14202 1370 aa23.19■■□□□ 1.3
PRPF38B-202ENST00000370022 HRCP23327 699 aa23.18■■□□□ 1.3
PRPF38B-202ENST00000370022 RAB3GAP2Q9H2M9 1393 aa23.17■■□□□ 1.3
PRPF38B-202ENST00000370022 IQGAP3Q86VI3 1631 aa23.16■■□□□ 1.3
PRPF38B-202ENST00000370022 CEP152O94986 1710 aa23.14■■□□□ 1.3
PRPF38B-202ENST00000370022 ARHGAP31Q2M1Z3 1444 aa23.13■■□□□ 1.29
PRPF38B-202ENST00000370022 CAMSAP1Q5T5Y3 1602 aa23.13■■□□□ 1.29
PRPF38B-202ENST00000370022 TRIM52Q96A61 297 aa23.13■■□□□ 1.29
PRPF38B-202ENST00000370022 C3P01024 1663 aa23.12■■□□□ 1.29
PRPF38B-202ENST00000370022 PZPP20742 1482 aa23.12■■□□□ 1.29
PRPF38B-202ENST00000370022 TET3O43151 1660 aa23.11■■□□□ 1.29
PRPF38B-202ENST00000370022 EFCAB6Q5THR3 1501 aa23.1■■□□□ 1.29
PRPF38B-202ENST00000370022 CEBPAP49715 358 aaPredicted RBP23.1■■□□□ 1.29
PRPF38B-202ENST00000370022 NPATQ14207 1427 aa23.09■■□□□ 1.29
PRPF38B-202ENST00000370022 RPRD2Q5VT52 1461 aaKnown RBP23.09■■□□□ 1.29
PRPF38B-202ENST00000370022 PLPPR3Q6T4P5 718 aa23.05■■□□□ 1.28
PRPF38B-202ENST00000370022 SLC4A1APQ9BWU0 796 aaKnown RBP23.04■■□□□ 1.28
PRPF38B-202ENST00000370022 PCGF6Q9BYE7 350 aa23.02■■□□□ 1.28
PRPF38B-202ENST00000370022 SPATA31D1Q6ZQQ2 1576 aa23.02■■□□□ 1.27
PRPF38B-202ENST00000370022 ERVK-7P63135 1459 aa23.02■■□□□ 1.27
PRPF38B-202ENST00000370022 FBXO31Q5XUX0 539 aaPredicted RBP23.01■■□□□ 1.27
PRPF38B-202ENST00000370022 MPHOSPH9Q99550 1183 aa23.01■■□□□ 1.27
PRPF38B-202ENST00000370022 E9PCH4 1651 aa23■■□□□ 1.27
PRPF38B-202ENST00000370022 TNRQ92752 1358 aa22.98■■□□□ 1.27
PRPF38B-202ENST00000370022 PREX1Q8TCU6 1659 aa22.98■■□□□ 1.27
PRPF38B-202ENST00000370022 NOS1P29475 1434 aa22.98■■□□□ 1.27
PRPF38B-202ENST00000370022 PKD2Q13563 968 aa22.97■■□□□ 1.27
PRPF38B-202ENST00000370022 SETD1BQ9UPS6 1966 aaKnown RBP22.96■■□□□ 1.27
PRPF38B-202ENST00000370022 UHRF1BP1Q6BDS2 1440 aa22.93■■□□□ 1.26
PRPF38B-202ENST00000370022 NLRP1Q9C000 1473 aa22.93■■□□□ 1.26
PRPF38B-202ENST00000370022 PTPRTO14522 1441 aa22.92■■□□□ 1.26
PRPF38B-202ENST00000370022 MYO3AQ8NEV4 1616 aa22.91■■□□□ 1.26
PRPF38B-202ENST00000370022 SLC52A1Q9NWF4 448 aa22.91■■□□□ 1.26
PRPF38B-202ENST00000370022 SYNMO15061 1565 aa22.9■■□□□ 1.26
PRPF38B-202ENST00000370022 CFAP65Q6ZU64 1925 aaKnown RBP22.89■■□□□ 1.26
PRPF38B-202ENST00000370022 SPHKAPQ2M3C7 1700 aa22.89■■□□□ 1.25
PRPF38B-202ENST00000370022 TRPM2O94759 1503 aa22.87■■□□□ 1.25
PRPF38B-202ENST00000370022 A2ML1A8K2U0 1454 aa22.87■■□□□ 1.25
PRPF38B-202ENST00000370022 ZNF142P52746 1687 aaPredicted RBP22.86■■□□□ 1.25
PRPF38B-202ENST00000370022 CEP170BQ9Y4F5 1589 aaPredicted RBP22.86■■□□□ 1.25
PRPF38B-202ENST00000370022 LMTK3Q96Q04 1460 aa22.85■■□□□ 1.25
PRPF38B-202ENST00000370022 FOXD1Q16676 465 aa22.84■■□□□ 1.25
PRPF38B-202ENST00000370022 PIK3C2BO00750 1634 aa22.84■■□□□ 1.25
PRPF38B-202ENST00000370022 PLA2R1Q13018 1463 aa22.84■■□□□ 1.25
PRPF38B-202ENST00000370022 IDI1Q13907 227 aa22.84■■□□□ 1.25
PRPF38B-202ENST00000370022 UGGT1Q9NYU2 1555 aa22.81■■□□□ 1.24
PRPF38B-202ENST00000370022 KDM5AP29375 1690 aaKnown RBP22.8■■□□□ 1.24
PRPF38B-202ENST00000370022 DHX57Q6P158 1386 aaKnown RBP22.79■■□□□ 1.24
PRPF38B-202ENST00000370022 THEMISQ8N1K5 641 aaPredicted RBP22.79■■□□□ 1.24
PRPF38B-202ENST00000370022 CCDC144AA2RUR9 1427 aa22.79■■□□□ 1.24
PRPF38B-202ENST00000370022 ANKRD30BQ9BXX2 1392 aa22.78■■□□□ 1.24
PRPF38B-202ENST00000370022 STAG3Q9UJ98 1225 aa22.78■■□□□ 1.24
PRPF38B-202ENST00000370022 ADGRB3O60242 1522 aa22.77■■□□□ 1.24
PRPF38B-202ENST00000370022 CLTCL1P53675 1640 aa22.76■■□□□ 1.23
PRPF38B-202ENST00000370022 UBR1Q8IWV7 1749 aa22.76■■□□□ 1.23
PRPF38B-202ENST00000370022 TMEM131LA2VDJ0 1609 aa22.73■■□□□ 1.23
PRPF38B-202ENST00000370022 CHGAP10645 457 aaKnown RBP22.71■■□□□ 1.23
PRPF38B-202ENST00000370022 HSPA2P54652 639 aa22.71■■□□□ 1.23
PRPF38B-202ENST00000370022 KIF1BO60333 1816 aa22.69■■□□□ 1.22
PRPF38B-202ENST00000370022 NEURL4Q96JN8 1562 aa22.69■■□□□ 1.22
PRPF38B-202ENST00000370022 SLIT1O75093 1534 aa22.69■■□□□ 1.22
PRPF38B-202ENST00000370022 TMEM2Q9UHN6 1383 aa22.68■■□□□ 1.22
PRPF38B-202ENST00000370022 ARHGAP23Q9P227 1491 aa22.68■■□□□ 1.22
PRPF38B-202ENST00000370022 HDGFP51858 240 aaKnown RBP22.66■■□□□ 1.22
PRPF38B-202ENST00000370022 ANKLE2Q86XL3 938 aa22.65■■□□□ 1.22
PRPF38B-202ENST00000370022 SPATA31E1Q6ZUB1 1445 aa22.64■■□□□ 1.22
PRPF38B-202ENST00000370022 EID1Q9Y6B2 187 aa22.63■■□□□ 1.21
PRPF38B-202ENST00000370022 ZNF326Q5BKZ1 582 aaKnown RBP22.63■■□□□ 1.21
PRPF38B-202ENST00000370022 MYO5BQ9ULV0 1848 aa22.62■■□□□ 1.21
PRPF38B-202ENST00000370022 RPGRIP1LQ68CZ1 1315 aa22.62■■□□□ 1.21
PRPF38B-202ENST00000370022 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.62■■□□□ 1.21
PRPF38B-202ENST00000370022 CLSPNQ9HAW4 1339 aa22.61■■□□□ 1.21
PRPF38B-202ENST00000370022 ZFYVE9O95405 1425 aa22.61■■□□□ 1.21
PRPF38B-202ENST00000370022 RIMS2Q9UQ26 1411 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms