RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 MPHOSPH9Q99550 1183 aa18.08■□□□□ 0.48
TUBE1-202ENST00000368662 ARHGEF40Q8TER5 1519 aa18.07■□□□□ 0.48
TUBE1-202ENST00000368662 REREQ9P2R6 1566 aa18.07■□□□□ 0.48
TUBE1-202ENST00000368662 KIF3BO15066 747 aa18.07■□□□□ 0.48
TUBE1-202ENST00000368662 SLC4A1APQ9BWU0 796 aaKnown RBP18.07■□□□□ 0.48
TUBE1-202ENST00000368662 BCORL1Q5H9F3 1711 aa18.06■□□□□ 0.48
TUBE1-202ENST00000368662 DEPDC5O75140 1603 aa18.06■□□□□ 0.48
TUBE1-202ENST00000368662 PZPP20742 1482 aa18.05■□□□□ 0.48
TUBE1-202ENST00000368662 ZEB1P37275 1124 aaPredicted RBP18.05■□□□□ 0.48
TUBE1-202ENST00000368662 KANK1Q14678 1352 aa18.04■□□□□ 0.48
TUBE1-202ENST00000368662 IQGAP3Q86VI3 1631 aa18.03■□□□□ 0.48
TUBE1-202ENST00000368662 FAM135AQ9P2D6 1515 aa18.03■□□□□ 0.48
TUBE1-202ENST00000368662 RNF17Q9BXT8 1623 aaKnown RBP18.03■□□□□ 0.48
TUBE1-202ENST00000368662 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.02■□□□□ 0.48
TUBE1-202ENST00000368662 PRDM15P57071 1507 aaPredicted RBP18.02■□□□□ 0.48
TUBE1-202ENST00000368662 AGLP35573 1532 aa18.01■□□□□ 0.47
TUBE1-202ENST00000368662 VWDEQ8N2E2 1590 aa17.99■□□□□ 0.47
TUBE1-202ENST00000368662 MROH1Q8NDA8 1641 aa17.98■□□□□ 0.47
TUBE1-202ENST00000368662 PKD2Q13563 968 aa17.98■□□□□ 0.47
TUBE1-202ENST00000368662 GGT6Q6P531 493 aa17.96■□□□□ 0.47
TUBE1-202ENST00000368662 LMTK2Q8IWU2 1503 aa17.95■□□□□ 0.46
TUBE1-202ENST00000368662 PPP6R1Q9UPN7 881 aa17.95■□□□□ 0.46
TUBE1-202ENST00000368662 ANKRD30BQ9BXX2 1392 aa17.93■□□□□ 0.46
TUBE1-202ENST00000368662 TET3O43151 1660 aa17.93■□□□□ 0.46
TUBE1-202ENST00000368662 FOXD1Q16676 465 aa17.92■□□□□ 0.46
TUBE1-202ENST00000368662 WASHC2CQ9Y4E1 1318 aa17.92■□□□□ 0.46
TUBE1-202ENST00000368662 ZC3H13Q5T200 1668 aaKnown RBP17.91■□□□□ 0.46
TUBE1-202ENST00000368662 ABCC3O15438 1527 aa17.89■□□□□ 0.46
TUBE1-202ENST00000368662 TIMELESSQ9UNS1 1208 aa17.89■□□□□ 0.45
TUBE1-202ENST00000368662 EFCAB6Q5THR3 1501 aa17.89■□□□□ 0.45
TUBE1-202ENST00000368662 SIGLEC1Q9BZZ2 1709 aa17.88■□□□□ 0.45
TUBE1-202ENST00000368662 ARID4BQ4LE39 1312 aaPredicted RBP17.88■□□□□ 0.45
TUBE1-202ENST00000368662 RPRD2Q5VT52 1461 aaKnown RBP17.87■□□□□ 0.45
TUBE1-202ENST00000368662 SIN3AQ96ST3 1273 aa17.87■□□□□ 0.45
TUBE1-202ENST00000368662 CEP152O94986 1710 aa17.87■□□□□ 0.45
TUBE1-202ENST00000368662 E9PCH4 1651 aa17.86■□□□□ 0.45
TUBE1-202ENST00000368662 NEUROD1Q13562 356 aa17.86■□□□□ 0.45
TUBE1-202ENST00000368662 ARHGAP31Q2M1Z3 1444 aa17.84■□□□□ 0.45
TUBE1-202ENST00000368662 CAMSAP1Q5T5Y3 1602 aa17.84■□□□□ 0.45
TUBE1-202ENST00000368662 PTPRTO14522 1441 aa17.83■□□□□ 0.44
TUBE1-202ENST00000368662 ESF1Q9H501 851 aaKnown RBP17.83■□□□□ 0.44
TUBE1-202ENST00000368662 CCDC144AA2RUR9 1427 aa17.82■□□□□ 0.44
TUBE1-202ENST00000368662 MLECQ14165 292 aa17.82■□□□□ 0.44
TUBE1-202ENST00000368662 NPATQ14207 1427 aa17.82■□□□□ 0.44
TUBE1-202ENST00000368662 TONSLQ96HA7 1378 aa17.81■□□□□ 0.44
TUBE1-202ENST00000368662 PLA2R1Q13018 1463 aa17.81■□□□□ 0.44
TUBE1-202ENST00000368662 TRPM2O94759 1503 aa17.8■□□□□ 0.44
TUBE1-202ENST00000368662 SPHKAPQ2M3C7 1700 aa17.8■□□□□ 0.44
TUBE1-202ENST00000368662 CNTLNQ9NXG0 1405 aa17.8■□□□□ 0.44
TUBE1-202ENST00000368662 CLTCQ00610 1675 aaKnown RBP17.77■□□□□ 0.44
TUBE1-202ENST00000368662 NOS1P29475 1434 aa17.75■□□□□ 0.43
TUBE1-202ENST00000368662 MROH2AA6NES4 1674 aa17.73■□□□□ 0.43
TUBE1-202ENST00000368662 ZMYM3Q14202 1370 aa17.73■□□□□ 0.43
TUBE1-202ENST00000368662 PREX1Q8TCU6 1659 aa17.7■□□□□ 0.42
TUBE1-202ENST00000368662 CLTCL1P53675 1640 aa17.7■□□□□ 0.42
TUBE1-202ENST00000368662 FER1L4A9Z1Z3 1794 aa17.7■□□□□ 0.42
TUBE1-202ENST00000368662 ERVK-7P63135 1459 aa17.7■□□□□ 0.42
TUBE1-202ENST00000368662 NEURL4Q96JN8 1562 aa17.69■□□□□ 0.42
TUBE1-202ENST00000368662 L3MBTL2Q969R5 705 aa17.69■□□□□ 0.42
TUBE1-202ENST00000368662 SLC52A1Q9NWF4 448 aa17.69■□□□□ 0.42
TUBE1-202ENST00000368662 PPP1R15AO75807 674 aaPredicted RBP17.69■□□□□ 0.42
TUBE1-202ENST00000368662 CFAP65Q6ZU64 1925 aaKnown RBP17.68■□□□□ 0.42
TUBE1-202ENST00000368662 SPATA31D1Q6ZQQ2 1576 aa17.68■□□□□ 0.42
TUBE1-202ENST00000368662 SYNMO15061 1565 aa17.68■□□□□ 0.42
TUBE1-202ENST00000368662 SPATA31E1Q6ZUB1 1445 aa17.66■□□□□ 0.42
TUBE1-202ENST00000368662 PIK3C2BO00750 1634 aa17.66■□□□□ 0.42
TUBE1-202ENST00000368662 FBXO31Q5XUX0 539 aaPredicted RBP17.66■□□□□ 0.42
TUBE1-202ENST00000368662 UGGT1Q9NYU2 1555 aa17.66■□□□□ 0.42
TUBE1-202ENST00000368662 KIF1BO60333 1816 aa17.65■□□□□ 0.42
TUBE1-202ENST00000368662 ADAMTSL3P82987 1691 aa17.64■□□□□ 0.41
TUBE1-202ENST00000368662 STAC3Q96MF2 364 aa17.63■□□□□ 0.41
TUBE1-202ENST00000368662 MADDQ8WXG6 1647 aa17.63■□□□□ 0.41
TUBE1-202ENST00000368662 RGL3Q3MIN7 710 aa17.62■□□□□ 0.41
TUBE1-202ENST00000368662 ADGRB3O60242 1522 aa17.61■□□□□ 0.41
TUBE1-202ENST00000368662 IDI1Q13907 227 aa17.61■□□□□ 0.41
TUBE1-202ENST00000368662 DCAF11Q8TEB1 546 aa17.61■□□□□ 0.41
TUBE1-202ENST00000368662 C3P01024 1663 aa17.61■□□□□ 0.41
TUBE1-202ENST00000368662 TNRQ92752 1358 aa17.6■□□□□ 0.41
TUBE1-202ENST00000368662 RIMS1Q86UR5 1692 aaKnown RBP17.58■□□□□ 0.41
TUBE1-202ENST00000368662 UHRF1BP1Q6BDS2 1440 aa17.58■□□□□ 0.41
TUBE1-202ENST00000368662 RPGRIP1LQ68CZ1 1315 aa17.58■□□□□ 0.4
TUBE1-202ENST00000368662 CHGAP10645 457 aaKnown RBP17.58■□□□□ 0.4
TUBE1-202ENST00000368662 CEBPAP49715 358 aaPredicted RBP17.56■□□□□ 0.4
TUBE1-202ENST00000368662 ZNF326Q5BKZ1 582 aaKnown RBP17.56■□□□□ 0.4
TUBE1-202ENST00000368662 NLRP1Q9C000 1473 aa17.56■□□□□ 0.4
TUBE1-202ENST00000368662 KDM2AQ9Y2K7 1162 aa17.56■□□□□ 0.4
TUBE1-202ENST00000368662 STAG3Q9UJ98 1225 aa17.55■□□□□ 0.4
TUBE1-202ENST00000368662 TMEM131LA2VDJ0 1609 aa17.55■□□□□ 0.4
TUBE1-202ENST00000368662 MYOM2P54296 1465 aa17.54■□□□□ 0.4
TUBE1-202ENST00000368662 PRAG1Q86YV5 1406 aa17.53■□□□□ 0.4
TUBE1-202ENST00000368662 KDM5AP29375 1690 aaKnown RBP17.52■□□□□ 0.4
TUBE1-202ENST00000368662 NBPF8Q3BBV2 869 aa17.52■□□□□ 0.4
TUBE1-202ENST00000368662 IFT172Q9UG01 1749 aa17.51■□□□□ 0.39
TUBE1-202ENST00000368662 A2ML1A8K2U0 1454 aa17.5■□□□□ 0.39
TUBE1-202ENST00000368662 PTPRMP28827 1452 aa17.5■□□□□ 0.39
TUBE1-202ENST00000368662 VGFO15240 615 aaPredicted RBP17.49■□□□□ 0.39
TUBE1-202ENST00000368662 PLPPR3Q6T4P5 718 aa17.49■□□□□ 0.39
TUBE1-202ENST00000368662 PPLO60437 1756 aa17.49■□□□□ 0.39
TUBE1-202ENST00000368662 RALGAPBQ86X10 1494 aa17.49■□□□□ 0.39
TUBE1-202ENST00000368662 NEXMIFQ5QGS0 1516 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms