RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 CLSPNQ9HAW4 1339 aa23.31■■□□□ 1.32
LMNA-203ENST00000368297 KDM5DQ9BY66 1539 aa23.3■■□□□ 1.32
LMNA-203ENST00000368297 PZPP20742 1482 aa23.29■■□□□ 1.32
LMNA-203ENST00000368297 SLC4A1APQ9BWU0 796 aaKnown RBP23.29■■□□□ 1.32
LMNA-203ENST00000368297 KIF3BO15066 747 aa23.28■■□□□ 1.32
LMNA-203ENST00000368297 DEPDC5O75140 1603 aa23.25■■□□□ 1.31
LMNA-203ENST00000368297 ATP10AO60312 1499 aa23.25■■□□□ 1.31
LMNA-203ENST00000368297 ARHGEF40Q8TER5 1519 aa23.24■■□□□ 1.31
LMNA-203ENST00000368297 IQGAP3Q86VI3 1631 aa23.24■■□□□ 1.31
LMNA-203ENST00000368297 FAM135AQ9P2D6 1515 aa23.24■■□□□ 1.31
LMNA-203ENST00000368297 KANK1Q14678 1352 aa23.21■■□□□ 1.31
LMNA-203ENST00000368297 BCORL1Q5H9F3 1711 aa23.21■■□□□ 1.31
LMNA-203ENST00000368297 RNF17Q9BXT8 1623 aaKnown RBP23.21■■□□□ 1.31
LMNA-203ENST00000368297 PKD2Q13563 968 aa23.19■■□□□ 1.3
LMNA-203ENST00000368297 FOXD1Q16676 465 aa23.19■■□□□ 1.3
LMNA-203ENST00000368297 REREQ9P2R6 1566 aa23.19■■□□□ 1.3
LMNA-203ENST00000368297 MROH1Q8NDA8 1641 aa23.19■■□□□ 1.3
LMNA-203ENST00000368297 PRDM15P57071 1507 aaPredicted RBP23.18■■□□□ 1.3
LMNA-203ENST00000368297 GGT6Q6P531 493 aa23.16■■□□□ 1.3
LMNA-203ENST00000368297 SIN3AQ96ST3 1273 aa23.14■■□□□ 1.29
LMNA-203ENST00000368297 VWDEQ8N2E2 1590 aa23.14■■□□□ 1.29
LMNA-203ENST00000368297 NEUROD1Q13562 356 aa23.13■■□□□ 1.29
LMNA-203ENST00000368297 AGLP35573 1532 aa23.12■■□□□ 1.29
LMNA-203ENST00000368297 TET3O43151 1660 aa23.11■■□□□ 1.29
LMNA-203ENST00000368297 CEP152O94986 1710 aa23.11■■□□□ 1.29
LMNA-203ENST00000368297 SIGLEC1Q9BZZ2 1709 aa23.1■■□□□ 1.29
LMNA-203ENST00000368297 ANKRD30BQ9BXX2 1392 aa23.09■■□□□ 1.29
LMNA-203ENST00000368297 E9PCH4 1651 aa23.07■■□□□ 1.28
LMNA-203ENST00000368297 WASHC2CQ9Y4E1 1318 aa23.06■■□□□ 1.28
LMNA-203ENST00000368297 LMTK2Q8IWU2 1503 aa23.06■■□□□ 1.28
LMNA-203ENST00000368297 ABCC3O15438 1527 aa23.04■■□□□ 1.28
LMNA-203ENST00000368297 ARID4BQ4LE39 1312 aaPredicted RBP23.04■■□□□ 1.28
LMNA-203ENST00000368297 ZC3H13Q5T200 1668 aaKnown RBP23.04■■□□□ 1.28
LMNA-203ENST00000368297 EFCAB6Q5THR3 1501 aa23.03■■□□□ 1.28
LMNA-203ENST00000368297 MLECQ14165 292 aa23.03■■□□□ 1.28
LMNA-203ENST00000368297 CAMSAP1Q5T5Y3 1602 aa23.01■■□□□ 1.27
LMNA-203ENST00000368297 TONSLQ96HA7 1378 aa23■■□□□ 1.27
LMNA-203ENST00000368297 RPRD2Q5VT52 1461 aaKnown RBP22.98■■□□□ 1.27
LMNA-203ENST00000368297 SPHKAPQ2M3C7 1700 aa22.98■■□□□ 1.27
LMNA-203ENST00000368297 PPP6R1Q9UPN7 881 aa22.97■■□□□ 1.27
LMNA-203ENST00000368297 TIMELESSQ9UNS1 1208 aa22.97■■□□□ 1.27
LMNA-203ENST00000368297 CCDC144AA2RUR9 1427 aa22.95■■□□□ 1.26
LMNA-203ENST00000368297 CLTCQ00610 1675 aaKnown RBP22.95■■□□□ 1.26
LMNA-203ENST00000368297 PLA2R1Q13018 1463 aa22.95■■□□□ 1.26
LMNA-203ENST00000368297 ESF1Q9H501 851 aaKnown RBP22.94■■□□□ 1.26
LMNA-203ENST00000368297 NPATQ14207 1427 aa22.92■■□□□ 1.26
LMNA-203ENST00000368297 TRPM2O94759 1503 aa22.92■■□□□ 1.26
LMNA-203ENST00000368297 PTPRTO14522 1441 aa22.92■■□□□ 1.26
LMNA-203ENST00000368297 CFAP65Q6ZU64 1925 aaKnown RBP22.9■■□□□ 1.26
LMNA-203ENST00000368297 ARHGAP31Q2M1Z3 1444 aa22.9■■□□□ 1.26
LMNA-203ENST00000368297 CLTCL1P53675 1640 aa22.87■■□□□ 1.25
LMNA-203ENST00000368297 L3MBTL2Q969R5 705 aa22.84■■□□□ 1.25
LMNA-203ENST00000368297 CNTLNQ9NXG0 1405 aa22.84■■□□□ 1.25
LMNA-203ENST00000368297 PREX1Q8TCU6 1659 aa22.83■■□□□ 1.25
LMNA-203ENST00000368297 PPP1R15AO75807 674 aaPredicted RBP22.82■■□□□ 1.24
LMNA-203ENST00000368297 UGGT1Q9NYU2 1555 aa22.82■■□□□ 1.24
LMNA-203ENST00000368297 FER1L4A9Z1Z3 1794 aa22.82■■□□□ 1.24
LMNA-203ENST00000368297 NOS1P29475 1434 aa22.82■■□□□ 1.24
LMNA-203ENST00000368297 MROH2AA6NES4 1674 aa22.8■■□□□ 1.24
LMNA-203ENST00000368297 SYNMO15061 1565 aa22.79■■□□□ 1.24
LMNA-203ENST00000368297 KIF1BO60333 1816 aa22.79■■□□□ 1.24
LMNA-203ENST00000368297 ZMYM3Q14202 1370 aa22.78■■□□□ 1.24
LMNA-203ENST00000368297 RGL3Q3MIN7 710 aa22.78■■□□□ 1.24
LMNA-203ENST00000368297 ERVK-7P63135 1459 aa22.78■■□□□ 1.24
LMNA-203ENST00000368297 FBXO31Q5XUX0 539 aaPredicted RBP22.77■■□□□ 1.24
LMNA-203ENST00000368297 PIK3C2BO00750 1634 aa22.74■■□□□ 1.23
LMNA-203ENST00000368297 SPATA31E1Q6ZUB1 1445 aa22.74■■□□□ 1.23
LMNA-203ENST00000368297 SPATA31D1Q6ZQQ2 1576 aa22.74■■□□□ 1.23
LMNA-203ENST00000368297 CHGAP10645 457 aaKnown RBP22.74■■□□□ 1.23
LMNA-203ENST00000368297 DCAF11Q8TEB1 546 aa22.73■■□□□ 1.23
LMNA-203ENST00000368297 MADDQ8WXG6 1647 aa22.72■■□□□ 1.23
LMNA-203ENST00000368297 KDM2AQ9Y2K7 1162 aa22.71■■□□□ 1.23
LMNA-203ENST00000368297 SLC52A1Q9NWF4 448 aa22.71■■□□□ 1.23
LMNA-203ENST00000368297 C3P01024 1663 aa22.7■■□□□ 1.22
LMNA-203ENST00000368297 RIMS1Q86UR5 1692 aaKnown RBP22.7■■□□□ 1.22
LMNA-203ENST00000368297 NEURL4Q96JN8 1562 aa22.7■■□□□ 1.22
LMNA-203ENST00000368297 ZNF326Q5BKZ1 582 aaKnown RBP22.7■■□□□ 1.22
LMNA-203ENST00000368297 ADAMTSL3P82987 1691 aa22.69■■□□□ 1.22
LMNA-203ENST00000368297 ADGRB3O60242 1522 aa22.69■■□□□ 1.22
LMNA-203ENST00000368297 IDI1Q13907 227 aa22.68■■□□□ 1.22
LMNA-203ENST00000368297 PLPPR3Q6T4P5 718 aa22.68■■□□□ 1.22
LMNA-203ENST00000368297 CEBPAP49715 358 aaPredicted RBP22.66■■□□□ 1.22
LMNA-203ENST00000368297 NBPF8Q3BBV2 869 aa22.65■■□□□ 1.22
LMNA-203ENST00000368297 TNRQ92752 1358 aa22.65■■□□□ 1.22
LMNA-203ENST00000368297 UHRF1BP1Q6BDS2 1440 aa22.63■■□□□ 1.21
LMNA-203ENST00000368297 STAG3Q9UJ98 1225 aa22.62■■□□□ 1.21
LMNA-203ENST00000368297 TMEM131LA2VDJ0 1609 aa22.61■■□□□ 1.21
LMNA-203ENST00000368297 MYO5BQ9ULV0 1848 aa22.61■■□□□ 1.21
LMNA-203ENST00000368297 IFT172Q9UG01 1749 aa22.61■■□□□ 1.21
LMNA-203ENST00000368297 ZNF316A6NFI3 1004 aaPredicted RBP22.6■■□□□ 1.21
LMNA-203ENST00000368297 PRAG1Q86YV5 1406 aa22.59■■□□□ 1.21
LMNA-203ENST00000368297 STAC3Q96MF2 364 aa22.58■■□□□ 1.21
LMNA-203ENST00000368297 PPLO60437 1756 aa22.58■■□□□ 1.2
LMNA-203ENST00000368297 RPGRIP1LQ68CZ1 1315 aa22.57■■□□□ 1.2
LMNA-203ENST00000368297 MYOM2P54296 1465 aa22.56■■□□□ 1.2
LMNA-203ENST00000368297 RALGAPBQ86X10 1494 aa22.54■■□□□ 1.2
LMNA-203ENST00000368297 TRPM1Q7Z4N2 1603 aa22.54■■□□□ 1.2
LMNA-203ENST00000368297 NLRP1Q9C000 1473 aa22.54■■□□□ 1.2
LMNA-203ENST00000368297 A2ML1A8K2U0 1454 aa22.53■■□□□ 1.2
LMNA-203ENST00000368297 NEXMIFQ5QGS0 1516 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms