RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 MYO3AQ8NEV4 1616 aa16.95■□□□□ 0.3
USF1-201ENST00000368019 GGT6Q6P531 493 aa16.93■□□□□ 0.3
USF1-201ENST00000368019 IQSEC2Q5JU85 1478 aa16.92■□□□□ 0.3
USF1-201ENST00000368019 DHX29Q7Z478 1369 aaKnown RBP16.91■□□□□ 0.3
USF1-201ENST00000368019 CEP170BQ9Y4F5 1589 aaPredicted RBP16.91■□□□□ 0.3
USF1-201ENST00000368019 PLA2R1Q13018 1463 aa16.91■□□□□ 0.3
USF1-201ENST00000368019 NCOA2Q15596 1464 aa16.91■□□□□ 0.3
USF1-201ENST00000368019 NCKAP5LQ9HCH0 1330 aa16.9■□□□□ 0.3
USF1-201ENST00000368019 TCOF1Q13428 1488 aaKnown RBP16.89■□□□□ 0.29
USF1-201ENST00000368019 CCDC141Q6ZP82 1450 aa16.88■□□□□ 0.29
USF1-201ENST00000368019 CAMSAP2Q08AD1 1489 aa16.87■□□□□ 0.29
USF1-201ENST00000368019 PKD2Q13563 968 aa16.87■□□□□ 0.29
USF1-201ENST00000368019 RSPH4AQ5TD94 716 aa16.87■□□□□ 0.29
USF1-201ENST00000368019 ARHGEF5Q12774 1597 aa16.85■□□□□ 0.29
USF1-201ENST00000368019 DNMT1P26358 1616 aaKnown RBP16.85■□□□□ 0.29
USF1-201ENST00000368019 A2ML1A8K2U0 1454 aa16.85■□□□□ 0.29
USF1-201ENST00000368019 FAM135AQ9P2D6 1515 aa16.85■□□□□ 0.29
USF1-201ENST00000368019 KIF3BO15066 747 aa16.83■□□□□ 0.28
USF1-201ENST00000368019 ZNF335Q9H4Z2 1342 aaPredicted RBP16.83■□□□□ 0.28
USF1-201ENST00000368019 APLP2Q06481 763 aa16.82■□□□□ 0.28
USF1-201ENST00000368019 KDM5DQ9BY66 1539 aa16.81■□□□□ 0.28
USF1-201ENST00000368019 PZPP20742 1482 aa16.81■□□□□ 0.28
USF1-201ENST00000368019 LRRC9Q6ZRR7 1453 aa16.8■□□□□ 0.28
USF1-201ENST00000368019 FBXO31Q5XUX0 539 aaPredicted RBP16.8■□□□□ 0.28
USF1-201ENST00000368019 POLR1AO95602 1720 aaPredicted RBP16.79■□□□□ 0.28
USF1-201ENST00000368019 TNRQ92752 1358 aa16.79■□□□□ 0.28
USF1-201ENST00000368019 MAST1Q9Y2H9 1570 aa16.78■□□□□ 0.28
USF1-201ENST00000368019 RRBP1Q9P2E9 1410 aaKnown RBP16.78■□□□□ 0.28
USF1-201ENST00000368019 DISP3Q9P2K9 1392 aa16.77■□□□□ 0.28
USF1-201ENST00000368019 NEURL4Q96JN8 1562 aa16.77■□□□□ 0.28
USF1-201ENST00000368019 MAP3K1Q13233 1512 aa16.77■□□□□ 0.28
USF1-201ENST00000368019 TSPY4P0CV99 314 aa16.77■□□□□ 0.28
USF1-201ENST00000368019 TSPY10P0CW01 314 aa16.77■□□□□ 0.28
USF1-201ENST00000368019 RNF17Q9BXT8 1623 aaKnown RBP16.77■□□□□ 0.27
USF1-201ENST00000368019 WASHC2CQ9Y4E1 1318 aa16.76■□□□□ 0.27
USF1-201ENST00000368019 ILDR2Q71H61 639 aa16.76■□□□□ 0.27
USF1-201ENST00000368019 MIA2Q96PC5 1412 aa16.75■□□□□ 0.27
USF1-201ENST00000368019 KANK4Q5T7N3 995 aaPredicted RBP16.74■□□□□ 0.27
USF1-201ENST00000368019 NLRP1Q9C000 1473 aa16.73■□□□□ 0.27
USF1-201ENST00000368019 SPATA31D1Q6ZQQ2 1576 aa16.73■□□□□ 0.27
USF1-201ENST00000368019 EIF2AK4Q9P2K8 1649 aaKnown RBP16.73■□□□□ 0.27
USF1-201ENST00000368019 UBAP1LF5GYI3 381 aa16.72■□□□□ 0.27
USF1-201ENST00000368019 DHX57Q6P158 1386 aaKnown RBP16.72■□□□□ 0.27
USF1-201ENST00000368019 ZC3H13Q5T200 1668 aaKnown RBP16.72■□□□□ 0.27
USF1-201ENST00000368019 ABCC3O15438 1527 aa16.71■□□□□ 0.27
USF1-201ENST00000368019 MROH1Q8NDA8 1641 aa16.71■□□□□ 0.27
USF1-201ENST00000368019 MYOM3Q5VTT5 1437 aa16.7■□□□□ 0.26
USF1-201ENST00000368019 DEPDC5O75140 1603 aa16.7■□□□□ 0.26
USF1-201ENST00000368019 UGGT1Q9NYU2 1555 aa16.7■□□□□ 0.26
USF1-201ENST00000368019 MED14O60244 1454 aa16.7■□□□□ 0.26
USF1-201ENST00000368019 MIER1Q8N108 512 aa16.7■□□□□ 0.26
USF1-201ENST00000368019 THEMISQ8N1K5 641 aaPredicted RBP16.7■□□□□ 0.26
USF1-201ENST00000368019 CFAP65Q6ZU64 1925 aaKnown RBP16.7■□□□□ 0.26
USF1-201ENST00000368019 SHANK2Q9UPX8 1470 aa16.69■□□□□ 0.26
USF1-201ENST00000368019 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.69■□□□□ 0.26
USF1-201ENST00000368019 ANKLE2Q86XL3 938 aa16.69■□□□□ 0.26
USF1-201ENST00000368019 CPS1P31327 1500 aa16.69■□□□□ 0.26
USF1-201ENST00000368019 VWDEQ8N2E2 1590 aa16.68■□□□□ 0.26
USF1-201ENST00000368019 CEP152O94986 1710 aa16.67■□□□□ 0.26
USF1-201ENST00000368019 SOCS7O14512 581 aa16.66■□□□□ 0.26
USF1-201ENST00000368019 ERVK-7P63135 1459 aa16.66■□□□□ 0.26
USF1-201ENST00000368019 DUOX2Q9NRD8 1548 aa16.65■□□□□ 0.26
USF1-201ENST00000368019 NPHP4O75161 1426 aaPredicted RBP16.65■□□□□ 0.26
USF1-201ENST00000368019 CROCC2H7BZ55 1655 aa16.64■□□□□ 0.25
USF1-201ENST00000368019 IQGAP1P46940 1657 aa16.64■□□□□ 0.25
USF1-201ENST00000368019 STRCP1A6NGW2 1772 aa16.63■□□□□ 0.25
USF1-201ENST00000368019 UBR1Q8IWV7 1749 aa16.62■□□□□ 0.25
USF1-201ENST00000368019 ABCC5O15440 1437 aa16.62■□□□□ 0.25
USF1-201ENST00000368019 PTPN23Q9H3S7 1636 aa16.61■□□□□ 0.25
USF1-201ENST00000368019 ALKQ9UM73 1620 aa16.61■□□□□ 0.25
USF1-201ENST00000368019 PRDM15P57071 1507 aaPredicted RBP16.6■□□□□ 0.25
USF1-201ENST00000368019 ARHGAP31Q2M1Z3 1444 aa16.6■□□□□ 0.25
USF1-201ENST00000368019 TOM1O60784 492 aa16.59■□□□□ 0.25
USF1-201ENST00000368019 KIF15Q9NS87 1388 aa16.59■□□□□ 0.25
USF1-201ENST00000368019 ERBINQ96RT1 1412 aa16.58■□□□□ 0.24
USF1-201ENST00000368019 ARHGAP23Q9P227 1491 aa16.57■□□□□ 0.24
USF1-201ENST00000368019 HSPA1LP34931 641 aa16.57■□□□□ 0.24
USF1-201ENST00000368019 DAPK1P53355 1430 aa16.56■□□□□ 0.24
USF1-201ENST00000368019 SLIT1O75093 1534 aa16.55■□□□□ 0.24
USF1-201ENST00000368019 LRRC7Q96NW7 1537 aa16.55■□□□□ 0.24
USF1-201ENST00000368019 PIP4K2BP78356 416 aa16.55■□□□□ 0.24
USF1-201ENST00000368019 RRP7BPQ9NSQ0 103 aa16.55■□□□□ 0.24
USF1-201ENST00000368019 FGD6Q6ZV73 1430 aa16.54■□□□□ 0.24
USF1-201ENST00000368019 SCAF11Q99590 1463 aaKnown RBP16.54■□□□□ 0.24
USF1-201ENST00000368019 SYNMO15061 1565 aa16.53■□□□□ 0.24
USF1-201ENST00000368019 LTKP29376 864 aa16.53■□□□□ 0.24
USF1-201ENST00000368019 PIK3C2BO00750 1634 aa16.52■□□□□ 0.24
USF1-201ENST00000368019 MED1Q15648 1581 aaPredicted RBP16.51■□□□□ 0.23
USF1-201ENST00000368019 LMTK2Q8IWU2 1503 aa16.51■□□□□ 0.23
USF1-201ENST00000368019 KDM5AP29375 1690 aaKnown RBP16.51■□□□□ 0.23
USF1-201ENST00000368019 YTHDC1Q96MU7 727 aaKnown RBP16.51■□□□□ 0.23
USF1-201ENST00000368019 XIRP1Q702N8 1843 aaKnown RBP16.51■□□□□ 0.23
USF1-201ENST00000368019 TXNDC2Q86VQ3 553 aa16.49■□□□□ 0.23
USF1-201ENST00000368019 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.49■□□□□ 0.23
USF1-201ENST00000368019 ANKRD30AQ9BXX3 1397 aa16.49■□□□□ 0.23
USF1-201ENST00000368019 KANK1Q14678 1352 aa16.48■□□□□ 0.23
USF1-201ENST00000368019 TMEM2Q9UHN6 1383 aa16.47■□□□□ 0.23
USF1-201ENST00000368019 CHIC2Q9UKJ5 165 aa16.46■□□□□ 0.23
USF1-201ENST00000368019 ADGRL2O95490 1459 aa16.46■□□□□ 0.23
USF1-201ENST00000368019 NOS1P29475 1434 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms