RNA–Protein interactions for RNA: ENST00000367390.7

LHX9-203, Transcript of LIM homeobox 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LHX9, Length 7,413 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9-203ENST00000367390 CCDC88BA6NC98 1476 aa11.92□□□□□ -0.5
LHX9-203ENST00000367390 NUDCQ9Y266 331 aa11.92□□□□□ -0.5
LHX9-203ENST00000367390 SLKQ9H2G2 1235 aaPredicted RBP11.92□□□□□ -0.5
LHX9-203ENST00000367390 U2SURPO15042 1029 aaKnown RBP11.91□□□□□ -0.5
LHX9-203ENST00000367390 ACBD3Q9H3P7 528 aa11.91□□□□□ -0.5
LHX9-203ENST00000367390 FOXD4L1Q9NU39 408 aa11.91□□□□□ -0.5
LHX9-203ENST00000367390 FRAT2O75474 233 aaPredicted RBP11.91□□□□□ -0.5
LHX9-203ENST00000367390 KCNH8Q96L42 1107 aa11.9□□□□□ -0.5
LHX9-203ENST00000367390 ERCC6Q03468 1493 aa11.9□□□□□ -0.5
LHX9-203ENST00000367390 R3HCC1Q9Y3T6 440 aaKnown RBP11.9□□□□□ -0.5
LHX9-203ENST00000367390 SOX12O15370 315 aa11.89□□□□□ -0.51
LHX9-203ENST00000367390 CCDC43Q96MW1 224 aaKnown RBP11.89□□□□□ -0.51
LHX9-203ENST00000367390 CWC15Q9P013 229 aaKnown RBP11.89□□□□□ -0.51
LHX9-203ENST00000367390 EIF4G1Q04637 1599 aaKnown RBP11.89□□□□□ -0.51
LHX9-203ENST00000367390 SMARCA2P51531 1590 aa11.89□□□□□ -0.51
LHX9-203ENST00000367390 HSP90B2PQ58FF3 399 aa11.89□□□□□ -0.51
LHX9-203ENST00000367390 KNSTRNQ9Y448 316 aa11.89□□□□□ -0.51
LHX9-203ENST00000367390 BECN2A8MW95 431 aa11.88□□□□□ -0.51
LHX9-203ENST00000367390 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.88□□□□□ -0.51
LHX9-203ENST00000367390 SOGA1O94964 1423 aa11.88□□□□□ -0.51
LHX9-203ENST00000367390 INCENPQ9NQS7 918 aa11.88□□□□□ -0.51
LHX9-203ENST00000367390 H3BQV1 296 aa11.88□□□□□ -0.51
LHX9-203ENST00000367390 ENOX2Q16206 610 aaKnown RBP11.88□□□□□ -0.51
LHX9-203ENST00000367390 IFFO2Q5TF58 517 aa11.88□□□□□ -0.51
LHX9-203ENST00000367390 CCDC173Q0VFZ6 552 aa11.87□□□□□ -0.51
LHX9-203ENST00000367390 SEPT7Q16181 437 aaKnown RBP11.87□□□□□ -0.51
LHX9-203ENST00000367390 TRIM34Q9BYJ4 488 aa11.87□□□□□ -0.51
LHX9-203ENST00000367390 TRIM6-TRIM34B2RNG4 842 aa11.87□□□□□ -0.51
LHX9-203ENST00000367390 B4GALNT3Q6L9W6 998 aa11.86□□□□□ -0.51
LHX9-203ENST00000367390 GPATCH3Q96I76 525 aa11.86□□□□□ -0.51
LHX9-203ENST00000367390 AKAP17AQ02040 695 aaKnown RBP11.86□□□□□ -0.51
LHX9-203ENST00000367390 GIMAP7Q8NHV1 300 aa11.86□□□□□ -0.51
LHX9-203ENST00000367390 FAM13BQ9NYF5 915 aa11.86□□□□□ -0.51
LHX9-203ENST00000367390 PLEKHD1A6NEE1 506 aa11.86□□□□□ -0.51
LHX9-203ENST00000367390 ANKRD20A12PQ8NF67 263 aa11.86□□□□□ -0.51
LHX9-203ENST00000367390 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.85□□□□□ -0.51
LHX9-203ENST00000367390 CCDC47Q96A33 483 aaKnown RBP11.85□□□□□ -0.51
LHX9-203ENST00000367390 RSPH6AQ9H0K4 717 aa11.85□□□□□ -0.51
LHX9-203ENST00000367390 TIMELESSQ9UNS1 1208 aa11.85□□□□□ -0.51
LHX9-203ENST00000367390 CAGE1Q8TC20 777 aa11.85□□□□□ -0.51
LHX9-203ENST00000367390 MYO6Q9UM54 1294 aa11.85□□□□□ -0.51
LHX9-203ENST00000367390 ANKRD18AQ8IVF6 992 aa11.85□□□□□ -0.51
LHX9-203ENST00000367390 DDX23Q9BUQ8 820 aaKnown RBP11.84□□□□□ -0.51
LHX9-203ENST00000367390 SMARCA4P51532 1647 aa11.84□□□□□ -0.51
LHX9-203ENST00000367390 PODXL2Q9NZ53 605 aa11.84□□□□□ -0.51
LHX9-203ENST00000367390 KIF16BQ96L93 1317 aa11.84□□□□□ -0.51
LHX9-203ENST00000367390 TOP2AP11388 1531 aaKnown RBP11.84□□□□□ -0.51
LHX9-203ENST00000367390 CCDC175P0C221 793 aa11.84□□□□□ -0.51
LHX9-203ENST00000367390 LMOD3Q0VAK6 560 aa11.84□□□□□ -0.51
LHX9-203ENST00000367390 RGL3Q3MIN7 710 aa11.84□□□□□ -0.51
LHX9-203ENST00000367390 CUX2O14529 1486 aa11.83□□□□□ -0.52
LHX9-203ENST00000367390 RTF1Q92541 710 aaKnown RBP11.83□□□□□ -0.52
LHX9-203ENST00000367390 CCDC9Q9Y3X0 531 aaKnown RBP11.83□□□□□ -0.52
LHX9-203ENST00000367390 EZRP15311 586 aaKnown RBP11.83□□□□□ -0.52
LHX9-203ENST00000367390 ARGLU1Q9NWB6 273 aaPredicted RBP11.83□□□□□ -0.52
LHX9-203ENST00000367390 TAF3Q5VWG9 929 aa11.83□□□□□ -0.52
LHX9-203ENST00000367390 ZNF526Q8TF50 670 aaPredicted RBP11.83□□□□□ -0.52
LHX9-203ENST00000367390 SAMD1Q6SPF0 538 aaPredicted RBP11.82□□□□□ -0.52
LHX9-203ENST00000367390 CEP63Q96MT8 703 aa11.82□□□□□ -0.52
LHX9-203ENST00000367390 EPS15P42566 896 aa11.82□□□□□ -0.52
LHX9-203ENST00000367390 TMEM132AQ24JP5 1023 aa11.82□□□□□ -0.52
LHX9-203ENST00000367390 MNS1Q8NEH6 495 aa11.82□□□□□ -0.52
LHX9-203ENST00000367390 WWC2Q6AWC2 1192 aa11.81□□□□□ -0.52
LHX9-203ENST00000367390 WDR70Q9NW82 654 aa11.81□□□□□ -0.52
LHX9-203ENST00000367390 GOLGA6L7A0A1B0GV03 622 aa11.81□□□□□ -0.52
LHX9-203ENST00000367390 CFDP1Q9UEE9 299 aaPredicted RBP11.81□□□□□ -0.52
LHX9-203ENST00000367390 FOXD4L6Q3SYB3 417 aaPredicted RBP11.81□□□□□ -0.52
LHX9-203ENST00000367390 FOXD4L3Q6VB84 417 aaPredicted RBP11.81□□□□□ -0.52
LHX9-203ENST00000367390 FHAD1B1AJZ9 1412 aa11.81□□□□□ -0.52
LHX9-203ENST00000367390 FAM184AQ8NB25 1140 aa11.81□□□□□ -0.52
LHX9-203ENST00000367390 RALBP1Q15311 655 aa11.8□□□□□ -0.52
LHX9-203ENST00000367390 PUS7Q96PZ0 661 aaKnown RBP11.8□□□□□ -0.52
LHX9-203ENST00000367390 IPO9Q96P70 1041 aaKnown RBP11.8□□□□□ -0.52
LHX9-203ENST00000367390 FBXW7Q969H0 707 aa11.8□□□□□ -0.52
LHX9-203ENST00000367390 POGKQ9P215 609 aa11.8□□□□□ -0.52
LHX9-203ENST00000367390 SOGA3Q5TF21 947 aa11.8□□□□□ -0.52
LHX9-203ENST00000367390 DHX16O60231 1041 aaKnown RBP11.79□□□□□ -0.52
LHX9-203ENST00000367390 MFAP1P55081 439 aaKnown RBP11.79□□□□□ -0.52
LHX9-203ENST00000367390 MCTP1Q6DN14 999 aa11.79□□□□□ -0.52
LHX9-203ENST00000367390 TTLL5Q6EMB2 1281 aa11.79□□□□□ -0.52
LHX9-203ENST00000367390 AXDND1Q5T1B0 1012 aaPredicted RBP11.78□□□□□ -0.52
LHX9-203ENST00000367390 CARMIL1Q5VZK9 1371 aa11.78□□□□□ -0.52
LHX9-203ENST00000367390 CCNB3Q8WWL7 1395 aa11.78□□□□□ -0.52
LHX9-203ENST00000367390 LEKR1Q6ZMV7 388 aa11.78□□□□□ -0.52
LHX9-203ENST00000367390 MAPK8IP2Q13387 824 aaPredicted RBP11.78□□□□□ -0.52
LHX9-203ENST00000367390 SPATA24Q86W54 205 aa11.78□□□□□ -0.52
LHX9-203ENST00000367390 OFD1O75665 1012 aa11.78□□□□□ -0.52
LHX9-203ENST00000367390 SIN3AQ96ST3 1273 aa11.78□□□□□ -0.52
LHX9-203ENST00000367390 KIAA0754O94854 1291 aa11.77□□□□□ -0.52
LHX9-203ENST00000367390 RBM25P49756 843 aaKnown RBP11.77□□□□□ -0.52
LHX9-203ENST00000367390 CENPHQ9H3R5 247 aa11.77□□□□□ -0.53
LHX9-203ENST00000367390 GTF2E1P29083 439 aaPredicted RBP11.77□□□□□ -0.53
LHX9-203ENST00000367390 ERCC4Q92889 916 aaPredicted RBP11.76□□□□□ -0.53
LHX9-203ENST00000367390 GRIPAP1Q4V328 841 aa11.76□□□□□ -0.53
LHX9-203ENST00000367390 TAX1BP1Q86VP1 789 aa11.76□□□□□ -0.53
LHX9-203ENST00000367390 TICAM2Q86XR7 235 aa11.76□□□□□ -0.53
LHX9-203ENST00000367390 CFAP57Q96MR6 1250 aa11.76□□□□□ -0.53
LHX9-203ENST00000367390 SYNE3Q6ZMZ3 975 aa11.75□□□□□ -0.53
LHX9-203ENST00000367390 CCDC66A2RUB6 948 aa11.75□□□□□ -0.53
LHX9-203ENST00000367390 CSB-PGBD3P0DP91 1061 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms