RNA–Protein interactions for RNA: ENST00000367367.8

PTPRC-203, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-203ENST00000367367 CLIP1P30622 1438 aa5.06□□□□□ -1.6
PTPRC-203ENST00000367367 WDR7Q9Y4E6 1490 aa5.06□□□□□ -1.6
PTPRC-203ENST00000367367 CFAP43Q8NDM7 1665 aa5.06□□□□□ -1.6
PTPRC-203ENST00000367367 ECM2O94769 699 aaPredicted RBP5.06□□□□□ -1.6
PTPRC-203ENST00000367367 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.06□□□□□ -1.6
PTPRC-203ENST00000367367 CEP162Q5TB80 1403 aa5.05□□□□□ -1.6
PTPRC-203ENST00000367367 ATP10BO94823 1461 aa5.05□□□□□ -1.6
PTPRC-203ENST00000367367 TIE1P35590 1138 aa5.05□□□□□ -1.6
PTPRC-203ENST00000367367 FAM69CQ0P6D2 419 aa5.05□□□□□ -1.6
PTPRC-203ENST00000367367 FMN1Q68DA7 1419 aa5.05□□□□□ -1.6
PTPRC-203ENST00000367367 SPRYD3Q8NCJ5 442 aa5.05□□□□□ -1.6
PTPRC-203ENST00000367367 KIF12Q96FN5 646 aa5.05□□□□□ -1.6
PTPRC-203ENST00000367367 EPRSP07814 1512 aaKnown RBP5.05□□□□□ -1.6
PTPRC-203ENST00000367367 GLI2P10070 1586 aa5.05□□□□□ -1.6
PTPRC-203ENST00000367367 TTLL13PA6NNM8 815 aa5.04□□□□□ -1.6
PTPRC-203ENST00000367367 CCDC61Q9Y6R9 512 aa5.04□□□□□ -1.6
PTPRC-203ENST00000367367 ABCA9Q8IUA7 1624 aa5.03□□□□□ -1.6
PTPRC-203ENST00000367367 TTC37Q6PGP7 1564 aa5.03□□□□□ -1.6
PTPRC-203ENST00000367367 KIF14Q15058 1648 aa5.03□□□□□ -1.6
PTPRC-203ENST00000367367 ATP1B4Q9UN42 357 aaPredicted RBP5.03□□□□□ -1.6
PTPRC-203ENST00000367367 KDM6BO15054 1643 aa5.03□□□□□ -1.6
PTPRC-203ENST00000367367 MYO5CQ9NQX4 1742 aa5.02□□□□□ -1.61
PTPRC-203ENST00000367367 FYCO1Q9BQS8 1478 aa5.02□□□□□ -1.61
PTPRC-203ENST00000367367 POTEB3A0JP26 581 aa5.02□□□□□ -1.61
PTPRC-203ENST00000367367 SNPHO15079 494 aa5.02□□□□□ -1.61
PTPRC-203ENST00000367367 EMP3P54852 163 aa5.02□□□□□ -1.61
PTPRC-203ENST00000367367 POTEBQ6S5H4 581 aa5.02□□□□□ -1.61
PTPRC-203ENST00000367367 KCNH8Q96L42 1107 aa5.02□□□□□ -1.61
PTPRC-203ENST00000367367 TRIM35Q9UPQ4 493 aa5.02□□□□□ -1.61
PTPRC-203ENST00000367367 C14orf37Q86TY3 774 aa5.02□□□□□ -1.61
PTPRC-203ENST00000367367 CASKIN1Q8WXD9 1431 aa5.01□□□□□ -1.61
PTPRC-203ENST00000367367 MAGI3Q5TCQ9 1506 aa5.01□□□□□ -1.61
PTPRC-203ENST00000367367 MAP3K13O43283 966 aa5.01□□□□□ -1.61
PTPRC-203ENST00000367367 RNF166Q96A37 237 aaPredicted RBP5.01□□□□□ -1.61
PTPRC-203ENST00000367367 PODXL2Q9NZ53 605 aa5.01□□□□□ -1.61
PTPRC-203ENST00000367367 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.01□□□□□ -1.61
PTPRC-203ENST00000367367 CDC42BPAQ5VT25 1732 aa5.01□□□□□ -1.61
PTPRC-203ENST00000367367 CDC42BPBQ9Y5S2 1711 aa5.01□□□□□ -1.61
PTPRC-203ENST00000367367 CHGAP10645 457 aaKnown RBP5□□□□□ -1.61
PTPRC-203ENST00000367367 NKX1-1Q15270 411 aaPredicted RBP5□□□□□ -1.61
PTPRC-203ENST00000367367 IER5LQ5T953 404 aa5□□□□□ -1.61
PTPRC-203ENST00000367367 CCDC18Q5T9S5 1454 aa5□□□□□ -1.61
PTPRC-203ENST00000367367 NBR1Q14596 966 aa5□□□□□ -1.61
PTPRC-203ENST00000367367 HS3ST6Q96QI5 342 aa5□□□□□ -1.61
PTPRC-203ENST00000367367 CD109Q6YHK3 1445 aa4.99□□□□□ -1.61
PTPRC-203ENST00000367367 FAM205CA6NFA0 338 aa4.99□□□□□ -1.61
PTPRC-203ENST00000367367 KLHL34Q8N239 644 aa4.99□□□□□ -1.61
PTPRC-203ENST00000367367 TEX14Q8IWB6 1497 aa4.99□□□□□ -1.61
PTPRC-203ENST00000367367 PREX2Q70Z35 1606 aa4.99□□□□□ -1.61
PTPRC-203ENST00000367367 PLEKHD1A6NEE1 506 aa4.98□□□□□ -1.61
PTPRC-203ENST00000367367 PLCG2P16885 1265 aa4.98□□□□□ -1.61
PTPRC-203ENST00000367367 RNF25Q96BH1 459 aaPredicted RBP4.98□□□□□ -1.61
PTPRC-203ENST00000367367 COL17A1Q9UMD9 1497 aaPredicted RBP4.98□□□□□ -1.61
PTPRC-203ENST00000367367 TROQ12816 1431 aaPredicted RBP4.98□□□□□ -1.61
PTPRC-203ENST00000367367 VPS8Q8N3P4 1428 aa4.98□□□□□ -1.61
PTPRC-203ENST00000367367 RICTORQ6R327 1708 aa4.98□□□□□ -1.61
PTPRC-203ENST00000367367 TIAM1Q13009 1591 aa4.98□□□□□ -1.61
PTPRC-203ENST00000367367 CFAP74Q9C0B2 1584 aa4.98□□□□□ -1.61
PTPRC-203ENST00000367367 HRCP23327 699 aa4.97□□□□□ -1.61
PTPRC-203ENST00000367367 FRMPD1Q5SYB0 1578 aa4.97□□□□□ -1.61
PTPRC-203ENST00000367367 SUPT6HQ7KZ85 1726 aaKnown RBP4.97□□□□□ -1.61
PTPRC-203ENST00000367367 ITSN2Q9NZM3 1697 aa4.97□□□□□ -1.61
PTPRC-203ENST00000367367 EHBP1L1Q8N3D4 1523 aa4.96□□□□□ -1.62
PTPRC-203ENST00000367367 FANCAO15360 1455 aa4.96□□□□□ -1.62
PTPRC-203ENST00000367367 TRIM26Q12899 539 aaPredicted RBP4.96□□□□□ -1.62
PTPRC-203ENST00000367367 CDK11AQ9UQ88 783 aaPredicted RBP4.96□□□□□ -1.62
PTPRC-203ENST00000367367 ARHGAP5Q13017 1502 aa4.96□□□□□ -1.62
PTPRC-203ENST00000367367 MTUS2Q5JR59 1369 aa4.95□□□□□ -1.62
PTPRC-203ENST00000367367 BRPF1P55201 1214 aaPredicted RBP4.95□□□□□ -1.62
PTPRC-203ENST00000367367 SPOCK2Q92563 424 aa4.95□□□□□ -1.62
PTPRC-203ENST00000367367 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.95□□□□□ -1.62
PTPRC-203ENST00000367367 NEO1Q92859 1461 aa4.95□□□□□ -1.62
PTPRC-203ENST00000367367 ARAP3Q8WWN8 1544 aa4.94□□□□□ -1.62
PTPRC-203ENST00000367367 SAMD9LQ8IVG5 1584 aa4.94□□□□□ -1.62
PTPRC-203ENST00000367367 PLCH2O75038 1416 aa4.94□□□□□ -1.62
PTPRC-203ENST00000367367 ADGRL1O94910 1474 aa4.94□□□□□ -1.62
PTPRC-203ENST00000367367 ABCC1P33527 1531 aa4.93□□□□□ -1.62
PTPRC-203ENST00000367367 SIGLEC1Q9BZZ2 1709 aa4.93□□□□□ -1.62
PTPRC-203ENST00000367367 LRRC9Q6ZRR7 1453 aa4.93□□□□□ -1.62
PTPRC-203ENST00000367367 AKNAQ7Z591 1439 aa4.93□□□□□ -1.62
PTPRC-203ENST00000367367 NCOA2Q15596 1464 aa4.93□□□□□ -1.62
PTPRC-203ENST00000367367 SYCP2Q9BX26 1530 aa4.92□□□□□ -1.62
PTPRC-203ENST00000367367 GPATCH8Q9UKJ3 1502 aaKnown RBP4.92□□□□□ -1.62
PTPRC-203ENST00000367367 RAPGEF3O95398 923 aa4.92□□□□□ -1.62
PTPRC-203ENST00000367367 MAP3K1Q13233 1512 aa4.92□□□□□ -1.62
PTPRC-203ENST00000367367 ARHGEF40Q8TER5 1519 aa4.92□□□□□ -1.62
PTPRC-203ENST00000367367 ZMYM4Q5VZL5 1548 aa4.92□□□□□ -1.62
PTPRC-203ENST00000367367 KDM5CP41229 1560 aa4.91□□□□□ -1.62
PTPRC-203ENST00000367367 HECW2Q9P2P5 1572 aa4.91□□□□□ -1.62
PTPRC-203ENST00000367367 DENND4BO75064 1496 aaPredicted RBP4.91□□□□□ -1.62
PTPRC-203ENST00000367367 KIDINS220Q9ULH0 1771 aa4.91□□□□□ -1.62
PTPRC-203ENST00000367367 CCNB3Q8WWL7 1395 aa4.91□□□□□ -1.62
PTPRC-203ENST00000367367 ARHGEF12Q9NZN5 1544 aa4.91□□□□□ -1.62
PTPRC-203ENST00000367367 GTPBP6O43824 516 aaPredicted RBP4.91□□□□□ -1.62
PTPRC-203ENST00000367367 KANK4Q5T7N3 995 aaPredicted RBP4.91□□□□□ -1.62
PTPRC-203ENST00000367367 MYT1LQ9UL68 1186 aa4.91□□□□□ -1.62
PTPRC-203ENST00000367367 POGZQ7Z3K3 1410 aa4.91□□□□□ -1.62
PTPRC-203ENST00000367367 SCAPERQ9BY12 1400 aa4.91□□□□□ -1.62
PTPRC-203ENST00000367367 ABCA6Q8N139 1617 aa4.91□□□□□ -1.62
PTPRC-203ENST00000367367 PHLDB1Q86UU1 1377 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms