RNA–Protein interactions for RNA: ENST00000366983.5

ATF3-204, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-204ENST00000366983 ZC3H13Q5T200 1668 aaKnown RBP13.12□□□□□ -0.31
ATF3-204ENST00000366983 DHX29Q7Z478 1369 aaKnown RBP13.12□□□□□ -0.31
ATF3-204ENST00000366983 RNF17Q9BXT8 1623 aaKnown RBP13.12□□□□□ -0.31
ATF3-204ENST00000366983 PIAS4Q8N2W9 510 aaPredicted RBP13.11□□□□□ -0.31
ATF3-204ENST00000366983 MIA2Q96PC5 1412 aa13.11□□□□□ -0.31
ATF3-204ENST00000366983 ZNF644Q9H582 1327 aaPredicted RBP13.11□□□□□ -0.31
ATF3-204ENST00000366983 CERKQ8TCT0 537 aa13.1□□□□□ -0.31
ATF3-204ENST00000366983 PZPP20742 1482 aa13.1□□□□□ -0.31
ATF3-204ENST00000366983 TCOF1Q13428 1488 aaKnown RBP13.1□□□□□ -0.31
ATF3-204ENST00000366983 MYOM3Q5VTT5 1437 aa13.08□□□□□ -0.32
ATF3-204ENST00000366983 LTBP4Q8N2S1 1624 aa13.08□□□□□ -0.32
ATF3-204ENST00000366983 A2ML1A8K2U0 1454 aa13.08□□□□□ -0.32
ATF3-204ENST00000366983 CROCC2H7BZ55 1655 aa13.08□□□□□ -0.32
ATF3-204ENST00000366983 SHANK2Q9UPX8 1470 aa13.07□□□□□ -0.32
ATF3-204ENST00000366983 POLR1AO95602 1720 aaPredicted RBP13.07□□□□□ -0.32
ATF3-204ENST00000366983 DNMT1P26358 1616 aaKnown RBP13.06□□□□□ -0.32
ATF3-204ENST00000366983 GGT6Q6P531 493 aa13.05□□□□□ -0.32
ATF3-204ENST00000366983 NLRP1Q9C000 1473 aa13.04□□□□□ -0.32
ATF3-204ENST00000366983 MROH1Q8NDA8 1641 aa13.03□□□□□ -0.32
ATF3-204ENST00000366983 PKD2Q13563 968 aa13.03□□□□□ -0.32
ATF3-204ENST00000366983 ABCC3O15438 1527 aa13.03□□□□□ -0.32
ATF3-204ENST00000366983 PRDM15P57071 1507 aaPredicted RBP13.03□□□□□ -0.32
ATF3-204ENST00000366983 DUOX2Q9NRD8 1548 aa13.03□□□□□ -0.32
ATF3-204ENST00000366983 TSPY4P0CV99 314 aa13.02□□□□□ -0.33
ATF3-204ENST00000366983 TSPY10P0CW01 314 aa13.02□□□□□ -0.33
ATF3-204ENST00000366983 TNRQ92752 1358 aa13.02□□□□□ -0.33
ATF3-204ENST00000366983 SPATA31D1Q6ZQQ2 1576 aa13.02□□□□□ -0.33
ATF3-204ENST00000366983 KIF3BO15066 747 aa13.01□□□□□ -0.33
ATF3-204ENST00000366983 NEURL4Q96JN8 1562 aa13.01□□□□□ -0.33
ATF3-204ENST00000366983 PTPN23Q9H3S7 1636 aa13.01□□□□□ -0.33
ATF3-204ENST00000366983 DEPDC5O75140 1603 aa13□□□□□ -0.33
ATF3-204ENST00000366983 ERBINQ96RT1 1412 aa13□□□□□ -0.33
ATF3-204ENST00000366983 UGGT1Q9NYU2 1555 aa12.98□□□□□ -0.33
ATF3-204ENST00000366983 WASHC2CQ9Y4E1 1318 aa12.98□□□□□ -0.33
ATF3-204ENST00000366983 ADRA2BP18089 450 aa12.98□□□□□ -0.33
ATF3-204ENST00000366983 LOC105371045A0A1W2PR82 267 aa12.97□□□□□ -0.33
ATF3-204ENST00000366983 KANK4Q5T7N3 995 aaPredicted RBP12.97□□□□□ -0.33
ATF3-204ENST00000366983 CPS1P31327 1500 aa12.97□□□□□ -0.33
ATF3-204ENST00000366983 ERVK-7P63135 1459 aa12.97□□□□□ -0.33
ATF3-204ENST00000366983 FGD6Q6ZV73 1430 aa12.96□□□□□ -0.33
ATF3-204ENST00000366983 CEP152O94986 1710 aa12.96□□□□□ -0.33
ATF3-204ENST00000366983 MED14O60244 1454 aa12.96□□□□□ -0.34
ATF3-204ENST00000366983 DAPK1P53355 1430 aa12.95□□□□□ -0.34
ATF3-204ENST00000366983 ARHGAP31Q2M1Z3 1444 aa12.95□□□□□ -0.34
ATF3-204ENST00000366983 KIF15Q9NS87 1388 aa12.94□□□□□ -0.34
ATF3-204ENST00000366983 ABCC5O15440 1437 aa12.94□□□□□ -0.34
ATF3-204ENST00000366983 NCKAP5LQ9HCH0 1330 aa12.93□□□□□ -0.34
ATF3-204ENST00000366983 IQGAP1P46940 1657 aa12.93□□□□□ -0.34
ATF3-204ENST00000366983 APLP2Q06481 763 aa12.93□□□□□ -0.34
ATF3-204ENST00000366983 SYNMO15061 1565 aa12.93□□□□□ -0.34
ATF3-204ENST00000366983 KDM5AP29375 1690 aaKnown RBP12.93□□□□□ -0.34
ATF3-204ENST00000366983 UBR1Q8IWV7 1749 aa12.92□□□□□ -0.34
ATF3-204ENST00000366983 LMTK2Q8IWU2 1503 aa12.92□□□□□ -0.34
ATF3-204ENST00000366983 ADGRL2O95490 1459 aa12.91□□□□□ -0.34
ATF3-204ENST00000366983 ZNF335Q9H4Z2 1342 aaPredicted RBP12.91□□□□□ -0.34
ATF3-204ENST00000366983 VWDEQ8N2E2 1590 aa12.91□□□□□ -0.34
ATF3-204ENST00000366983 FBXO31Q5XUX0 539 aaPredicted RBP12.9□□□□□ -0.34
ATF3-204ENST00000366983 THEMISQ8N1K5 641 aaPredicted RBP12.9□□□□□ -0.34
ATF3-204ENST00000366983 NPHP4O75161 1426 aaPredicted RBP12.89□□□□□ -0.35
ATF3-204ENST00000366983 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.89□□□□□ -0.35
ATF3-204ENST00000366983 SLIT1O75093 1534 aa12.88□□□□□ -0.35
ATF3-204ENST00000366983 ANKRD30AQ9BXX3 1397 aa12.88□□□□□ -0.35
ATF3-204ENST00000366983 EFCAB6Q5THR3 1501 aa12.88□□□□□ -0.35
ATF3-204ENST00000366983 ARHGAP23Q9P227 1491 aa12.87□□□□□ -0.35
ATF3-204ENST00000366983 ANKLE2Q86XL3 938 aa12.87□□□□□ -0.35
ATF3-204ENST00000366983 KANK1Q14678 1352 aa12.86□□□□□ -0.35
ATF3-204ENST00000366983 SCAF11Q99590 1463 aaKnown RBP12.85□□□□□ -0.35
ATF3-204ENST00000366983 PIK3C2BO00750 1634 aa12.84□□□□□ -0.35
ATF3-204ENST00000366983 RPRD2Q5VT52 1461 aaKnown RBP12.84□□□□□ -0.35
ATF3-204ENST00000366983 UNC13BO14795 1591 aa12.82□□□□□ -0.36
ATF3-204ENST00000366983 ADGRB3O60242 1522 aa12.82□□□□□ -0.36
ATF3-204ENST00000366983 TET3O43151 1660 aa12.81□□□□□ -0.36
ATF3-204ENST00000366983 UBAP1LF5GYI3 381 aa12.81□□□□□ -0.36
ATF3-204ENST00000366983 NOS1P29475 1434 aa12.8□□□□□ -0.36
ATF3-204ENST00000366983 GCC2Q8IWJ2 1684 aa12.8□□□□□ -0.36
ATF3-204ENST00000366983 STRCP1A6NGW2 1772 aa12.8□□□□□ -0.36
ATF3-204ENST00000366983 RRP7BPQ9NSQ0 103 aa12.8□□□□□ -0.36
ATF3-204ENST00000366983 DISP3Q9P2K9 1392 aa12.8□□□□□ -0.36
ATF3-204ENST00000366983 ANKRD50Q9ULJ7 1429 aa12.79□□□□□ -0.36
ATF3-204ENST00000366983 LRRC7Q96NW7 1537 aa12.78□□□□□ -0.36
ATF3-204ENST00000366983 ALKQ9UM73 1620 aa12.78□□□□□ -0.36
ATF3-204ENST00000366983 TMEM2Q9UHN6 1383 aa12.78□□□□□ -0.36
ATF3-204ENST00000366983 TOM1O60784 492 aa12.77□□□□□ -0.37
ATF3-204ENST00000366983 ROCK1Q13464 1354 aa12.77□□□□□ -0.37
ATF3-204ENST00000366983 CFAP65Q6ZU64 1925 aaKnown RBP12.76□□□□□ -0.37
ATF3-204ENST00000366983 NWD1Q149M9 1564 aa12.76□□□□□ -0.37
ATF3-204ENST00000366983 IQGAP3Q86VI3 1631 aa12.76□□□□□ -0.37
ATF3-204ENST00000366983 EID1Q9Y6B2 187 aa12.74□□□□□ -0.37
ATF3-204ENST00000366983 NKTRP30414 1462 aaKnown RBP12.73□□□□□ -0.37
ATF3-204ENST00000366983 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.73□□□□□ -0.37
ATF3-204ENST00000366983 CHIC2Q9UKJ5 165 aa12.73□□□□□ -0.37
ATF3-204ENST00000366983 MED1Q15648 1581 aaPredicted RBP12.73□□□□□ -0.37
ATF3-204ENST00000366983 XIRP1Q702N8 1843 aaKnown RBP12.72□□□□□ -0.37
ATF3-204ENST00000366983 SLC52A1Q9NWF4 448 aa12.72□□□□□ -0.37
ATF3-204ENST00000366983 E9PCH4 1651 aa12.71□□□□□ -0.37
ATF3-204ENST00000366983 LTKP29376 864 aa12.71□□□□□ -0.37
ATF3-204ENST00000366983 FAM50AQ14320 339 aaKnown RBP12.71□□□□□ -0.37
ATF3-204ENST00000366983 TMEM131LA2VDJ0 1609 aa12.7□□□□□ -0.38
ATF3-204ENST00000366983 TXNDC2Q86VQ3 553 aa12.7□□□□□ -0.38
ATF3-204ENST00000366983 ZFYVE9O95405 1425 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms