RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 ATP10BO94823 1461 aa18.2■□□□□ 0.5
PRKN-205ENST00000366897 RAPGEF6Q8TEU7 1601 aa18.19■□□□□ 0.5
PRKN-205ENST00000366897 WDR7Q9Y4E6 1490 aa18.19■□□□□ 0.5
PRKN-205ENST00000366897 DNMT1P26358 1616 aaKnown RBP18.18■□□□□ 0.5
PRKN-205ENST00000366897 RRP1P56182 461 aaKnown RBP18.18■□□□□ 0.5
PRKN-205ENST00000366897 NUP153P49790 1475 aaKnown RBP18.17■□□□□ 0.5
PRKN-205ENST00000366897 TSPOAP1O95153 1857 aa18.16■□□□□ 0.5
PRKN-205ENST00000366897 POLR1AO95602 1720 aaPredicted RBP18.16■□□□□ 0.5
PRKN-205ENST00000366897 KIAA1107Q9UPP5 1409 aa18.16■□□□□ 0.5
PRKN-205ENST00000366897 CDCA7LQ96GN5 454 aa18.16■□□□□ 0.5
PRKN-205ENST00000366897 GLI2P10070 1586 aa18.15■□□□□ 0.5
PRKN-205ENST00000366897 PLIN1O60240 522 aa18.15■□□□□ 0.5
PRKN-205ENST00000366897 MBD5Q9P267 1494 aa18.15■□□□□ 0.5
PRKN-205ENST00000366897 RTN4Q9NQC3 1192 aaKnown RBP18.15■□□□□ 0.5
PRKN-205ENST00000366897 RCAN3Q9UKA8 241 aa18.15■□□□□ 0.5
PRKN-205ENST00000366897 DCAF11Q8TEB1 546 aa18.14■□□□□ 0.49
PRKN-205ENST00000366897 IL27Q8NEV9 243 aa18.13■□□□□ 0.49
PRKN-205ENST00000366897 PDE4AP27815 886 aa18.12■□□□□ 0.49
PRKN-205ENST00000366897 KIF15Q9NS87 1388 aa18.11■□□□□ 0.49
PRKN-205ENST00000366897 CAMSAP2Q08AD1 1489 aa18.11■□□□□ 0.49
PRKN-205ENST00000366897 KDM5CP41229 1560 aa18.11■□□□□ 0.49
PRKN-205ENST00000366897 NUP155O75694 1391 aa18.11■□□□□ 0.49
PRKN-205ENST00000366897 MYBBP1AQ9BQG0 1328 aaKnown RBP18.11■□□□□ 0.49
PRKN-205ENST00000366897 LRPPRCP42704 1394 aaKnown RBP18.09■□□□□ 0.49
PRKN-205ENST00000366897 NEFMP07197 916 aa18.09■□□□□ 0.49
PRKN-205ENST00000366897 MAP3K4Q9Y6R4 1608 aa18.08■□□□□ 0.48
PRKN-205ENST00000366897 CC2D1BQ5T0F9 858 aaKnown RBP18.07■□□□□ 0.48
PRKN-205ENST00000366897 PPRC1Q5VV67 1664 aaKnown RBP18.07■□□□□ 0.48
PRKN-205ENST00000366897 ANO8Q9HCE9 1232 aaPredicted RBP18.07■□□□□ 0.48
PRKN-205ENST00000366897 ANKRD50Q9ULJ7 1429 aa18.06■□□□□ 0.48
PRKN-205ENST00000366897 RGL3Q3MIN7 710 aa18.06■□□□□ 0.48
PRKN-205ENST00000366897 KIF14Q15058 1648 aa18.06■□□□□ 0.48
PRKN-205ENST00000366897 CD109Q6YHK3 1445 aa18.05■□□□□ 0.48
PRKN-205ENST00000366897 PLEKHD1A6NEE1 506 aa18.05■□□□□ 0.48
PRKN-205ENST00000366897 BRD4O60885 1362 aaPredicted RBP18.05■□□□□ 0.48
PRKN-205ENST00000366897 ROCK2O75116 1388 aaKnown RBP18.05■□□□□ 0.48
PRKN-205ENST00000366897 ARID4BQ4LE39 1312 aaPredicted RBP18.05■□□□□ 0.48
PRKN-205ENST00000366897 TCERG1O14776 1098 aaKnown RBP18.05■□□□□ 0.48
PRKN-205ENST00000366897 BACH2Q9BYV9 841 aa18.05■□□□□ 0.48
PRKN-205ENST00000366897 RALBP1Q15311 655 aa18.04■□□□□ 0.48
PRKN-205ENST00000366897 ANKRD30AQ9BXX3 1397 aa18.04■□□□□ 0.48
PRKN-205ENST00000366897 GPATCH8Q9UKJ3 1502 aaKnown RBP18.04■□□□□ 0.48
PRKN-205ENST00000366897 TROQ12816 1431 aaPredicted RBP18.03■□□□□ 0.48
PRKN-205ENST00000366897 RALGAPBQ86X10 1494 aa18.02■□□□□ 0.48
PRKN-205ENST00000366897 NBPF1Q3BBV0 1214 aa18.02■□□□□ 0.48
PRKN-205ENST00000366897 SLC4A3P48751 1232 aa18.02■□□□□ 0.48
PRKN-205ENST00000366897 NLRP13Q86W25 1043 aa18.01■□□□□ 0.47
PRKN-205ENST00000366897 CRBNQ96SW2 442 aa18.01■□□□□ 0.47
PRKN-205ENST00000366897 C20orf194Q5TEA3 1177 aa17.99■□□□□ 0.47
PRKN-205ENST00000366897 HNRNPMP52272 730 aaKnown RBP eCLIP17.99■□□□□ 0.47
PRKN-205ENST00000366897 KTN1Q86UP2 1357 aaKnown RBP17.98■□□□□ 0.47
PRKN-205ENST00000366897 UHRF1BP1Q6BDS2 1440 aa17.98■□□□□ 0.47
PRKN-205ENST00000366897 COL17A1Q9UMD9 1497 aaPredicted RBP17.98■□□□□ 0.47
PRKN-205ENST00000366897 ABCA9Q8IUA7 1624 aa17.97■□□□□ 0.47
PRKN-205ENST00000366897 TSPY4P0CV99 314 aa17.94■□□□□ 0.46
PRKN-205ENST00000366897 TSPY10P0CW01 314 aa17.94■□□□□ 0.46
PRKN-205ENST00000366897 PER1O15534 1290 aaPredicted RBP17.94■□□□□ 0.46
PRKN-205ENST00000366897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.94■□□□□ 0.46
PRKN-205ENST00000366897 ADGRL2O95490 1459 aa17.94■□□□□ 0.46
PRKN-205ENST00000366897 C9orf84Q5VXU9 1444 aa17.93■□□□□ 0.46
PRKN-205ENST00000366897 PARD3Q8TEW0 1356 aa17.93■□□□□ 0.46
PRKN-205ENST00000366897 PANK3Q9H999 370 aa17.93■□□□□ 0.46
PRKN-205ENST00000366897 ADGBQ8N7X0 1667 aa17.93■□□□□ 0.46
PRKN-205ENST00000366897 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.91■□□□□ 0.46
PRKN-205ENST00000366897 MS4A1P11836 297 aa17.91■□□□□ 0.46
PRKN-205ENST00000366897 PDE3BQ13370 1112 aa17.91■□□□□ 0.46
PRKN-205ENST00000366897 PRKCSHP14314 528 aaPredicted RBP17.9■□□□□ 0.46
PRKN-205ENST00000366897 DISP3Q9P2K9 1392 aa17.9■□□□□ 0.46
PRKN-205ENST00000366897 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.89■□□□□ 0.46
PRKN-205ENST00000366897 BRPF3Q9ULD4 1205 aa17.88■□□□□ 0.45
PRKN-205ENST00000366897 TTC37Q6PGP7 1564 aa17.88■□□□□ 0.45
PRKN-205ENST00000366897 ADAMTS8Q9UP79 889 aa17.87■□□□□ 0.45
PRKN-205ENST00000366897 ITSN2Q9NZM3 1697 aa17.87■□□□□ 0.45
PRKN-205ENST00000366897 ARHGEF12Q9NZN5 1544 aa17.87■□□□□ 0.45
PRKN-205ENST00000366897 PPM1GO15355 546 aaPredicted RBP17.86■□□□□ 0.45
PRKN-205ENST00000366897 CROCC2H7BZ55 1655 aa17.86■□□□□ 0.45
PRKN-205ENST00000366897 RGS3P49796 1198 aa17.85■□□□□ 0.45
PRKN-205ENST00000366897 TESK2Q96S53 571 aa17.85■□□□□ 0.45
PRKN-205ENST00000366897 E9PCH4 1651 aa17.84■□□□□ 0.45
PRKN-205ENST00000366897 ARAP3Q8WWN8 1544 aa17.83■□□□□ 0.45
PRKN-205ENST00000366897 NEO1Q92859 1461 aa17.83■□□□□ 0.45
PRKN-205ENST00000366897 RAPGEF3O95398 923 aa17.83■□□□□ 0.45
PRKN-205ENST00000366897 NFKBIBQ15653 356 aa17.83■□□□□ 0.45
PRKN-205ENST00000366897 USP35Q9P2H5 1018 aa17.83■□□□□ 0.45
PRKN-205ENST00000366897 PRAG1Q86YV5 1406 aa17.83■□□□□ 0.45
PRKN-205ENST00000366897 FANCAO15360 1455 aa17.82■□□□□ 0.44
PRKN-205ENST00000366897 CCDC144AA2RUR9 1427 aa17.82■□□□□ 0.44
PRKN-205ENST00000366897 PLCH2O75038 1416 aa17.81■□□□□ 0.44
PRKN-205ENST00000366897 DAXXQ9UER7 740 aaPredicted RBP17.81■□□□□ 0.44
PRKN-205ENST00000366897 CDC42BPAQ5VT25 1732 aa17.8■□□□□ 0.44
PRKN-205ENST00000366897 KDM5DQ9BY66 1539 aa17.8■□□□□ 0.44
PRKN-205ENST00000366897 DDRGK1Q96HY6 314 aa17.8■□□□□ 0.44
PRKN-205ENST00000366897 PLEKHH1Q9ULM0 1364 aa17.79■□□□□ 0.44
PRKN-205ENST00000366897 WASHC2CQ9Y4E1 1318 aa17.79■□□□□ 0.44
PRKN-205ENST00000366897 CCDC146Q8IYE0 955 aa17.78■□□□□ 0.44
PRKN-205ENST00000366897 BLMP54132 1417 aaPredicted RBP17.78■□□□□ 0.44
PRKN-205ENST00000366897 FRAT1Q92837 279 aaPredicted RBP17.78■□□□□ 0.44
PRKN-205ENST00000366897 KDM2BQ8NHM5 1336 aa17.78■□□□□ 0.44
PRKN-205ENST00000366897 GSE1Q14687 1217 aa17.77■□□□□ 0.44
PRKN-205ENST00000366897 FAM135AQ9P2D6 1515 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms