RNA–Protein interactions for RNA: ENST00000366889.6

PACRG-203, Transcript of parkin coregulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACRG, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-203ENST00000366889 CDC42BPAQ5VT25 1732 aa12.88□□□□□ -0.35
PACRG-203ENST00000366889 CDC42BPBQ9Y5S2 1711 aa12.88□□□□□ -0.35
PACRG-203ENST00000366889 CEBPAP49715 358 aaPredicted RBP12.87□□□□□ -0.35
PACRG-203ENST00000366889 PTPRTO14522 1441 aa12.86□□□□□ -0.35
PACRG-203ENST00000366889 CFDP1Q9UEE9 299 aaPredicted RBP12.86□□□□□ -0.35
PACRG-203ENST00000366889 PREX2Q70Z35 1606 aa12.85□□□□□ -0.35
PACRG-203ENST00000366889 FKBP8Q14318 412 aa12.85□□□□□ -0.35
PACRG-203ENST00000366889 ARHGAP5Q13017 1502 aa12.85□□□□□ -0.35
PACRG-203ENST00000366889 UHRF1BP1Q6BDS2 1440 aa12.84□□□□□ -0.35
PACRG-203ENST00000366889 SETD1BQ9UPS6 1966 aaKnown RBP12.84□□□□□ -0.35
PACRG-203ENST00000366889 PTPRKQ15262 1439 aa12.83□□□□□ -0.36
PACRG-203ENST00000366889 CAMSAP2Q08AD1 1489 aa12.83□□□□□ -0.36
PACRG-203ENST00000366889 CFAP74Q9C0B2 1584 aa12.83□□□□□ -0.36
PACRG-203ENST00000366889 ITGAEP38570 1179 aa12.83□□□□□ -0.36
PACRG-203ENST00000366889 EFCAB2Q5VUJ9 269 aa12.83□□□□□ -0.36
PACRG-203ENST00000366889 ZNF644Q9H582 1327 aaPredicted RBP12.82□□□□□ -0.36
PACRG-203ENST00000366889 DNMT1P26358 1616 aaKnown RBP12.81□□□□□ -0.36
PACRG-203ENST00000366889 C3P01024 1663 aa12.81□□□□□ -0.36
PACRG-203ENST00000366889 ZNF777Q9ULD5 760 aaPredicted RBP12.8□□□□□ -0.36
PACRG-203ENST00000366889 ABCC5O15440 1437 aa12.8□□□□□ -0.36
PACRG-203ENST00000366889 DAPK1P53355 1430 aa12.8□□□□□ -0.36
PACRG-203ENST00000366889 SCAPERQ9BY12 1400 aa12.8□□□□□ -0.36
PACRG-203ENST00000366889 PITPNM1O00562 1244 aa12.79□□□□□ -0.36
PACRG-203ENST00000366889 SAMD9LQ8IVG5 1584 aa12.79□□□□□ -0.36
PACRG-203ENST00000366889 UBAP1LF5GYI3 381 aa12.78□□□□□ -0.36
PACRG-203ENST00000366889 SETD5Q9C0A6 1442 aa12.78□□□□□ -0.36
PACRG-203ENST00000366889 HRCP23327 699 aa12.78□□□□□ -0.36
PACRG-203ENST00000366889 ARHGEF5Q12774 1597 aa12.77□□□□□ -0.36
PACRG-203ENST00000366889 NCOA1Q15788 1441 aa12.77□□□□□ -0.37
PACRG-203ENST00000366889 ABCC1P33527 1531 aa12.76□□□□□ -0.37
PACRG-203ENST00000366889 PLEKHH2Q8IVE3 1493 aa12.76□□□□□ -0.37
PACRG-203ENST00000366889 MBD5Q9P267 1494 aa12.76□□□□□ -0.37
PACRG-203ENST00000366889 HFM1A2PYH4 1435 aa12.76□□□□□ -0.37
PACRG-203ENST00000366889 KIAA1107Q9UPP5 1409 aa12.76□□□□□ -0.37
PACRG-203ENST00000366889 ROCK1Q13464 1354 aa12.76□□□□□ -0.37
PACRG-203ENST00000366889 AFAP1Q8N556 730 aa12.76□□□□□ -0.37
PACRG-203ENST00000366889 RSPH4AQ5TD94 716 aa12.75□□□□□ -0.37
PACRG-203ENST00000366889 MAGI2Q86UL8 1455 aa12.75□□□□□ -0.37
PACRG-203ENST00000366889 C9orf84Q5VXU9 1444 aa12.75□□□□□ -0.37
PACRG-203ENST00000366889 TRAPPC8Q9Y2L5 1435 aa12.75□□□□□ -0.37
PACRG-203ENST00000366889 RAB3GAP2Q9H2M9 1393 aa12.75□□□□□ -0.37
PACRG-203ENST00000366889 ZNF335Q9H4Z2 1342 aaPredicted RBP12.74□□□□□ -0.37
PACRG-203ENST00000366889 SYCP2Q9BX26 1530 aa12.74□□□□□ -0.37
PACRG-203ENST00000366889 HNRNPMP52272 730 aaKnown RBP eCLIP12.74□□□□□ -0.37
PACRG-203ENST00000366889 CHRDL2Q6WN34 429 aa12.74□□□□□ -0.37
PACRG-203ENST00000366889 PROM2Q8N271 834 aa12.74□□□□□ -0.37
PACRG-203ENST00000366889 SPDYE1Q8NFV5 336 aaPredicted RBP12.74□□□□□ -0.37
PACRG-203ENST00000366889 SHANK2Q9UPX8 1470 aa12.74□□□□□ -0.37
PACRG-203ENST00000366889 CROCC2H7BZ55 1655 aa12.74□□□□□ -0.37
PACRG-203ENST00000366889 NAIPQ13075 1403 aa12.74□□□□□ -0.37
PACRG-203ENST00000366889 ADGRL2O95490 1459 aa12.73□□□□□ -0.37
PACRG-203ENST00000366889 CAMSAP1Q5T5Y3 1602 aa12.73□□□□□ -0.37
PACRG-203ENST00000366889 HSPA1LP34931 641 aa12.72□□□□□ -0.37
PACRG-203ENST00000366889 ATP10AO60312 1499 aa12.72□□□□□ -0.37
PACRG-203ENST00000366889 CHIC2Q9UKJ5 165 aa12.72□□□□□ -0.37
PACRG-203ENST00000366889 GCC2Q8IWJ2 1684 aa12.72□□□□□ -0.37
PACRG-203ENST00000366889 CCDC141Q6ZP82 1450 aa12.71□□□□□ -0.37
PACRG-203ENST00000366889 CLEC11AQ9Y240 323 aa12.71□□□□□ -0.38
PACRG-203ENST00000366889 ZNF518AQ6AHZ1 1483 aa12.71□□□□□ -0.38
PACRG-203ENST00000366889 KDM5CP41229 1560 aa12.7□□□□□ -0.38
PACRG-203ENST00000366889 ADGBQ8N7X0 1667 aa12.7□□□□□ -0.38
PACRG-203ENST00000366889 CCER1Q8TC90 406 aaPredicted RBP12.69□□□□□ -0.38
PACRG-203ENST00000366889 MAST1Q9Y2H9 1570 aa12.69□□□□□ -0.38
PACRG-203ENST00000366889 DHX57Q6P158 1386 aaKnown RBP12.68□□□□□ -0.38
PACRG-203ENST00000366889 TSPY4P0CV99 314 aa12.68□□□□□ -0.38
PACRG-203ENST00000366889 TSPY10P0CW01 314 aa12.68□□□□□ -0.38
PACRG-203ENST00000366889 RRP7BPQ9NSQ0 103 aa12.68□□□□□ -0.38
PACRG-203ENST00000366889 ANKRD30AQ9BXX3 1397 aa12.68□□□□□ -0.38
PACRG-203ENST00000366889 DIP2CQ9Y2E4 1556 aa12.67□□□□□ -0.38
PACRG-203ENST00000366889 ABCA6Q8N139 1617 aa12.67□□□□□ -0.38
PACRG-203ENST00000366889 ZEB1P37275 1124 aaPredicted RBP12.67□□□□□ -0.38
PACRG-203ENST00000366889 KIDINS220Q9ULH0 1771 aa12.67□□□□□ -0.38
PACRG-203ENST00000366889 MYT1LQ9UL68 1186 aa12.66□□□□□ -0.38
PACRG-203ENST00000366889 ACIN1Q9UKV3 1341 aaKnown RBP12.66□□□□□ -0.38
PACRG-203ENST00000366889 MLH3Q9UHC1 1453 aa12.65□□□□□ -0.38
PACRG-203ENST00000366889 CLSPNQ9HAW4 1339 aa12.65□□□□□ -0.38
PACRG-203ENST00000366889 NCKAP5LQ9HCH0 1330 aa12.65□□□□□ -0.38
PACRG-203ENST00000366889 PIP4K2BP78356 416 aa12.64□□□□□ -0.39
PACRG-203ENST00000366889 SPAG9O60271 1321 aaKnown RBP12.64□□□□□ -0.39
PACRG-203ENST00000366889 ALKQ9UM73 1620 aa12.63□□□□□ -0.39
PACRG-203ENST00000366889 ZNF142P52746 1687 aaPredicted RBP12.63□□□□□ -0.39
PACRG-203ENST00000366889 RTEL1-TNFRSF6BF6WH68 1400 aa12.63□□□□□ -0.39
PACRG-203ENST00000366889 PLXNC1O60486 1568 aa12.62□□□□□ -0.39
PACRG-203ENST00000366889 INO80Q9ULG1 1556 aaPredicted RBP12.62□□□□□ -0.39
PACRG-203ENST00000366889 MYO3AQ8NEV4 1616 aa12.62□□□□□ -0.39
PACRG-203ENST00000366889 SETD1AO15047 1707 aaKnown RBP12.62□□□□□ -0.39
PACRG-203ENST00000366889 ATP7AQ04656 1500 aa12.62□□□□□ -0.39
PACRG-203ENST00000366889 REREQ9P2R6 1566 aa12.61□□□□□ -0.39
PACRG-203ENST00000366889 KIF15Q9NS87 1388 aa12.61□□□□□ -0.39
PACRG-203ENST00000366889 ANKRD50Q9ULJ7 1429 aa12.6□□□□□ -0.39
PACRG-203ENST00000366889 MROH2AA6NES4 1674 aa12.58□□□□□ -0.4
PACRG-203ENST00000366889 STAG3Q9UJ98 1225 aa12.57□□□□□ -0.4
PACRG-203ENST00000366889 DUOX2Q9NRD8 1548 aa12.57□□□□□ -0.4
PACRG-203ENST00000366889 FXR2P51116 673 aaKnown RBP eCLIP12.57□□□□□ -0.4
PACRG-203ENST00000366889 PIP4P2Q8N4L2 257 aa12.57□□□□□ -0.4
PACRG-203ENST00000366889 RGS17Q9UGC6 210 aaPredicted RBP12.57□□□□□ -0.4
PACRG-203ENST00000366889 CEP170BQ9Y4F5 1589 aaPredicted RBP12.56□□□□□ -0.4
PACRG-203ENST00000366889 AGLP35573 1532 aa12.56□□□□□ -0.4
PACRG-203ENST00000366889 PRR29P0C7W0 189 aa12.56□□□□□ -0.4
PACRG-203ENST00000366889 PLA2R1Q13018 1463 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms