RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 DMRT2Q9Y5R5 561 aa36.8■■■■□ 3.48
SHC1-201ENST00000366442 CROCC2H7BZ55 1655 aa36.8■■■■□ 3.48
SHC1-201ENST00000366442 EIF2AK4Q9P2K8 1649 aaKnown RBP36.79■■■■□ 3.48
SHC1-201ENST00000366442 RNF17Q9BXT8 1623 aaKnown RBP36.78■■■■□ 3.48
SHC1-201ENST00000366442 WASHC2CQ9Y4E1 1318 aa36.77■■■■□ 3.48
SHC1-201ENST00000366442 DNMT1P26358 1616 aaKnown RBP36.76■■■■□ 3.48
SHC1-201ENST00000366442 MYO3AQ8NEV4 1616 aa36.76■■■■□ 3.48
SHC1-201ENST00000366442 DUOX2Q9NRD8 1548 aa36.75■■■■□ 3.47
SHC1-201ENST00000366442 DAPK1P53355 1430 aa36.75■■■■□ 3.47
SHC1-201ENST00000366442 ZNF142P52746 1687 aaPredicted RBP36.74■■■■□ 3.47
SHC1-201ENST00000366442 PZPP20742 1482 aa36.72■■■■□ 3.47
SHC1-201ENST00000366442 NCOA1Q15788 1441 aa36.72■■■■□ 3.47
SHC1-201ENST00000366442 CEP170BQ9Y4F5 1589 aaPredicted RBP36.7■■■■□ 3.46
SHC1-201ENST00000366442 KIF15Q9NS87 1388 aa36.69■■■■□ 3.46
SHC1-201ENST00000366442 PTPRTO14522 1441 aa36.68■■■■□ 3.46
SHC1-201ENST00000366442 CAMSAP1Q5T5Y3 1602 aa36.68■■■■□ 3.46
SHC1-201ENST00000366442 ZC3H13Q5T200 1668 aaKnown RBP36.66■■■■□ 3.46
SHC1-201ENST00000366442 FBXO41Q8TF61 875 aa36.65■■■■□ 3.46
SHC1-201ENST00000366442 ERBINQ96RT1 1412 aa36.65■■■■□ 3.46
SHC1-201ENST00000366442 ABCC3O15438 1527 aa36.64■■■■□ 3.46
SHC1-201ENST00000366442 MROH1Q8NDA8 1641 aa36.63■■■■□ 3.45
SHC1-201ENST00000366442 TNRQ92752 1358 aa36.62■■■■□ 3.45
SHC1-201ENST00000366442 A2ML1A8K2U0 1454 aa36.62■■■■□ 3.45
SHC1-201ENST00000366442 PLA2R1Q13018 1463 aa36.62■■■■□ 3.45
SHC1-201ENST00000366442 FBXO31Q5XUX0 539 aaPredicted RBP36.61■■■■□ 3.45
SHC1-201ENST00000366442 RRP7BPQ9NSQ0 103 aa36.61■■■■□ 3.45
SHC1-201ENST00000366442 ANKRD30AQ9BXX3 1397 aa36.59■■■■□ 3.45
SHC1-201ENST00000366442 PRDM15P57071 1507 aaPredicted RBP36.54■■■■□ 3.44
SHC1-201ENST00000366442 CERKQ8TCT0 537 aa36.54■■■■□ 3.44
SHC1-201ENST00000366442 PKD2Q13563 968 aa36.53■■■■□ 3.44
SHC1-201ENST00000366442 FAM50AQ14320 339 aaKnown RBP36.53■■■■□ 3.44
SHC1-201ENST00000366442 ADGRL2O95490 1459 aa36.52■■■■□ 3.44
SHC1-201ENST00000366442 CHIC2Q9UKJ5 165 aa36.52■■■■□ 3.44
SHC1-201ENST00000366442 NLRP1Q9C000 1473 aa36.51■■■■□ 3.44
SHC1-201ENST00000366442 DEPDC5O75140 1603 aa36.49■■■■□ 3.43
SHC1-201ENST00000366442 CEP152O94986 1710 aa36.49■■■■□ 3.43
SHC1-201ENST00000366442 NCKAP5LQ9HCH0 1330 aa36.49■■■■□ 3.43
SHC1-201ENST00000366442 SPATA31D1Q6ZQQ2 1576 aa36.49■■■■□ 3.43
SHC1-201ENST00000366442 ERVK-7P63135 1459 aa36.44■■■■□ 3.42
SHC1-201ENST00000366442 ARHGAP31Q2M1Z3 1444 aa36.42■■■■□ 3.42
SHC1-201ENST00000366442 KANK1Q14678 1352 aa36.4■■■■□ 3.42
SHC1-201ENST00000366442 UGGT1Q9NYU2 1555 aa36.39■■■■□ 3.42
SHC1-201ENST00000366442 LTBP4Q8N2S1 1624 aa36.37■■■■□ 3.41
SHC1-201ENST00000366442 THEMISQ8N1K5 641 aaPredicted RBP36.37■■■■□ 3.41
SHC1-201ENST00000366442 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.37■■■■□ 3.41
SHC1-201ENST00000366442 VWDEQ8N2E2 1590 aa36.36■■■■□ 3.41
SHC1-201ENST00000366442 LMTK2Q8IWU2 1503 aa36.34■■■■□ 3.41
SHC1-201ENST00000366442 POLR1AO95602 1720 aaPredicted RBP36.34■■■■□ 3.41
SHC1-201ENST00000366442 ANKRD50Q9ULJ7 1429 aa36.32■■■■□ 3.4
SHC1-201ENST00000366442 CFAP65Q6ZU64 1925 aaKnown RBP36.31■■■■□ 3.4
SHC1-201ENST00000366442 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.3■■■■□ 3.4
SHC1-201ENST00000366442 NEURL4Q96JN8 1562 aa36.28■■■■□ 3.4
SHC1-201ENST00000366442 ANKLE2Q86XL3 938 aa36.28■■■■□ 3.4
SHC1-201ENST00000366442 ROCK1Q13464 1354 aa36.27■■■■□ 3.4
SHC1-201ENST00000366442 PPARGC1BQ86YN6 1023 aaKnown RBP36.26■■■■□ 3.4
SHC1-201ENST00000366442 IQSEC2Q5JU85 1478 aa36.25■■■■□ 3.39
SHC1-201ENST00000366442 ZNF335Q9H4Z2 1342 aaPredicted RBP36.23■■■■□ 3.39
SHC1-201ENST00000366442 MED14O60244 1454 aa36.21■■■■□ 3.39
SHC1-201ENST00000366442 UBR1Q8IWV7 1749 aa36.2■■■■□ 3.39
SHC1-201ENST00000366442 EFCAB6Q5THR3 1501 aa36.2■■■■□ 3.39
SHC1-201ENST00000366442 NPHP4O75161 1426 aaPredicted RBP36.15■■■■□ 3.38
SHC1-201ENST00000366442 UNC13BO14795 1591 aa36.13■■■■□ 3.37
SHC1-201ENST00000366442 NOS1P29475 1434 aa36.12■■■■□ 3.37
SHC1-201ENST00000366442 RPRD2Q5VT52 1461 aaKnown RBP36.11■■■■□ 3.37
SHC1-201ENST00000366442 RRBP1Q9P2E9 1410 aaKnown RBP36.1■■■■□ 3.37
SHC1-201ENST00000366442 IQGAP1P46940 1657 aa36.1■■■■□ 3.37
SHC1-201ENST00000366442 SLIT1O75093 1534 aa36.09■■■■□ 3.37
SHC1-201ENST00000366442 PIK3C2BO00750 1634 aa36.09■■■■□ 3.37
SHC1-201ENST00000366442 ARHGAP23Q9P227 1491 aa36.09■■■■□ 3.37
SHC1-201ENST00000366442 TET3O43151 1660 aa36.09■■■■□ 3.37
SHC1-201ENST00000366442 KDM5AP29375 1690 aaKnown RBP36.09■■■■□ 3.37
SHC1-201ENST00000366442 SYNMO15061 1565 aa36.08■■■■□ 3.37
SHC1-201ENST00000366442 ITGAEP38570 1179 aa36.08■■■■□ 3.37
SHC1-201ENST00000366442 SCAF11Q99590 1463 aaKnown RBP36.05■■■■□ 3.36
SHC1-201ENST00000366442 IDI1Q13907 227 aa36.04■■■■□ 3.36
SHC1-201ENST00000366442 CPS1P31327 1500 aa36.03■■■■□ 3.36
SHC1-201ENST00000366442 GCC2Q8IWJ2 1684 aa36.03■■■■□ 3.36
SHC1-201ENST00000366442 SLC52A1Q9NWF4 448 aa36.02■■■■□ 3.36
SHC1-201ENST00000366442 STAG3Q9UJ98 1225 aa36■■■■□ 3.35
SHC1-201ENST00000366442 TMEM2Q9UHN6 1383 aa36■■■■□ 3.35
SHC1-201ENST00000366442 IQGAP3Q86VI3 1631 aa35.99■■■■□ 3.35
SHC1-201ENST00000366442 LTKP29376 864 aa35.98■■■■□ 3.35
SHC1-201ENST00000366442 TXNDC2Q86VQ3 553 aa35.98■■■■□ 3.35
SHC1-201ENST00000366442 EID1Q9Y6B2 187 aa35.97■■■■□ 3.35
SHC1-201ENST00000366442 ADGRB3O60242 1522 aa35.95■■■■□ 3.35
SHC1-201ENST00000366442 NUP155O75694 1391 aa35.92■■■■□ 3.34
SHC1-201ENST00000366442 E9PCH4 1651 aa35.91■■■■□ 3.34
SHC1-201ENST00000366442 UBAP1LF5GYI3 381 aa35.87■■■■□ 3.33
SHC1-201ENST00000366442 STRCP1A6NGW2 1772 aa35.82■■■■□ 3.33
SHC1-201ENST00000366442 NAIPQ13075 1403 aa35.81■■■■□ 3.32
SHC1-201ENST00000366442 TMEM131LA2VDJ0 1609 aa35.79■■■■□ 3.32
SHC1-201ENST00000366442 LRRC7Q96NW7 1537 aa35.76■■■■□ 3.31
SHC1-201ENST00000366442 MYO5BQ9ULV0 1848 aa35.75■■■■□ 3.31
SHC1-201ENST00000366442 ZFYVE9O95405 1425 aa35.74■■■■□ 3.31
SHC1-201ENST00000366442 HFM1A2PYH4 1435 aa35.74■■■■□ 3.31
SHC1-201ENST00000366442 TOM1O60784 492 aa35.73■■■■□ 3.31
SHC1-201ENST00000366442 HDGFP51858 240 aaKnown RBP35.71■■■■□ 3.31
SHC1-201ENST00000366442 RIMS2Q9UQ26 1411 aa35.69■■■■□ 3.3
SHC1-201ENST00000366442 SPHKAPQ2M3C7 1700 aa35.66■■■■□ 3.3
SHC1-201ENST00000366442 PLEKHG1Q9ULL1 1385 aa35.65■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms