RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 A2MP01023 1474 aa10.23□□□□□ -0.77
RNU1-55P-201ENST00000365510 SPATA31D1Q6ZQQ2 1576 aa10.23□□□□□ -0.77
RNU1-55P-201ENST00000365510 PCGF6Q9BYE7 350 aa10.23□□□□□ -0.77
RNU1-55P-201ENST00000365510 PPP6R1Q9UPN7 881 aa10.23□□□□□ -0.77
RNU1-55P-201ENST00000365510 CNTLNQ9NXG0 1405 aa10.23□□□□□ -0.77
RNU1-55P-201ENST00000365510 KIAA1107Q9UPP5 1409 aa10.22□□□□□ -0.77
RNU1-55P-201ENST00000365510 DNMT1P26358 1616 aaKnown RBP10.22□□□□□ -0.77
RNU1-55P-201ENST00000365510 PKD2Q13563 968 aa10.21□□□□□ -0.77
RNU1-55P-201ENST00000365510 CCDC141Q6ZP82 1450 aa10.21□□□□□ -0.78
RNU1-55P-201ENST00000365510 ATP7AQ04656 1500 aa10.21□□□□□ -0.78
RNU1-55P-201ENST00000365510 ARHGEF5Q12774 1597 aa10.21□□□□□ -0.78
RNU1-55P-201ENST00000365510 DAPK1P53355 1430 aa10.2□□□□□ -0.78
RNU1-55P-201ENST00000365510 NPATQ14207 1427 aa10.2□□□□□ -0.78
RNU1-55P-201ENST00000365510 SHANK2Q9UPX8 1470 aa10.2□□□□□ -0.78
RNU1-55P-201ENST00000365510 CROCC2H7BZ55 1655 aa10.19□□□□□ -0.78
RNU1-55P-201ENST00000365510 MBD5Q9P267 1494 aa10.19□□□□□ -0.78
RNU1-55P-201ENST00000365510 ITGAEP38570 1179 aa10.19□□□□□ -0.78
RNU1-55P-201ENST00000365510 RSPH4AQ5TD94 716 aa10.19□□□□□ -0.78
RNU1-55P-201ENST00000365510 ABCC5O15440 1437 aa10.18□□□□□ -0.78
RNU1-55P-201ENST00000365510 DHX29Q7Z478 1369 aaKnown RBP10.18□□□□□ -0.78
RNU1-55P-201ENST00000365510 WASHC2CQ9Y4E1 1318 aa10.18□□□□□ -0.78
RNU1-55P-201ENST00000365510 CFAP65Q6ZU64 1925 aaKnown RBP10.18□□□□□ -0.78
RNU1-55P-201ENST00000365510 MYO3AQ8NEV4 1616 aa10.17□□□□□ -0.78
RNU1-55P-201ENST00000365510 CEP170BQ9Y4F5 1589 aaPredicted RBP10.17□□□□□ -0.78
RNU1-55P-201ENST00000365510 TNRQ92752 1358 aa10.16□□□□□ -0.78
RNU1-55P-201ENST00000365510 MROH2AA6NES4 1674 aa10.16□□□□□ -0.78
RNU1-55P-201ENST00000365510 ANKLE2Q86XL3 938 aa10.16□□□□□ -0.78
RNU1-55P-201ENST00000365510 INO80Q9ULG1 1556 aaPredicted RBP10.16□□□□□ -0.78
RNU1-55P-201ENST00000365510 ROCK1Q13464 1354 aa10.15□□□□□ -0.78
RNU1-55P-201ENST00000365510 PLXNC1O60486 1568 aa10.15□□□□□ -0.78
RNU1-55P-201ENST00000365510 TSPY4P0CV99 314 aa10.15□□□□□ -0.78
RNU1-55P-201ENST00000365510 TSPY10P0CW01 314 aa10.15□□□□□ -0.78
RNU1-55P-201ENST00000365510 RBM33Q96EV2 1170 aaKnown RBP10.15□□□□□ -0.78
RNU1-55P-201ENST00000365510 A2ML1A8K2U0 1454 aa10.15□□□□□ -0.78
RNU1-55P-201ENST00000365510 ADGBQ8N7X0 1667 aa10.15□□□□□ -0.79
RNU1-55P-201ENST00000365510 MAST1Q9Y2H9 1570 aa10.14□□□□□ -0.79
RNU1-55P-201ENST00000365510 TOM1O60784 492 aa10.14□□□□□ -0.79
RNU1-55P-201ENST00000365510 ADGRL2O95490 1459 aa10.14□□□□□ -0.79
RNU1-55P-201ENST00000365510 HFM1A2PYH4 1435 aa10.14□□□□□ -0.79
RNU1-55P-201ENST00000365510 ANKRD30AQ9BXX3 1397 aa10.14□□□□□ -0.79
RNU1-55P-201ENST00000365510 IQSEC2Q5JU85 1478 aa10.13□□□□□ -0.79
RNU1-55P-201ENST00000365510 PLA2R1Q13018 1463 aa10.12□□□□□ -0.79
RNU1-55P-201ENST00000365510 LTKP29376 864 aa10.12□□□□□ -0.79
RNU1-55P-201ENST00000365510 THEMISQ8N1K5 641 aaPredicted RBP10.12□□□□□ -0.79
RNU1-55P-201ENST00000365510 CHIC2Q9UKJ5 165 aa10.12□□□□□ -0.79
RNU1-55P-201ENST00000365510 NEURL4Q96JN8 1562 aa10.12□□□□□ -0.79
RNU1-55P-201ENST00000365510 GCC2Q8IWJ2 1684 aa10.12□□□□□ -0.79
RNU1-55P-201ENST00000365510 RTEL1-TNFRSF6BF6WH68 1400 aa10.11□□□□□ -0.79
RNU1-55P-201ENST00000365510 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.11□□□□□ -0.79
RNU1-55P-201ENST00000365510 RGS17Q9UGC6 210 aaPredicted RBP10.11□□□□□ -0.79
RNU1-55P-201ENST00000365510 ALKQ9UM73 1620 aa10.11□□□□□ -0.79
RNU1-55P-201ENST00000365510 SETD5Q9C0A6 1442 aa10.1□□□□□ -0.79
RNU1-55P-201ENST00000365510 ZNF142P52746 1687 aaPredicted RBP10.1□□□□□ -0.79
RNU1-55P-201ENST00000365510 STRCP1A6NGW2 1772 aa10.1□□□□□ -0.79
RNU1-55P-201ENST00000365510 KIF15Q9NS87 1388 aa10.1□□□□□ -0.79
RNU1-55P-201ENST00000365510 NPHP4O75161 1426 aaPredicted RBP10.09□□□□□ -0.79
RNU1-55P-201ENST00000365510 NAIPQ13075 1403 aa10.09□□□□□ -0.79
RNU1-55P-201ENST00000365510 PHF23Q9BUL5 403 aaPredicted RBP10.09□□□□□ -0.79
RNU1-55P-201ENST00000365510 RRP7BPQ9NSQ0 103 aa10.09□□□□□ -0.79
RNU1-55P-201ENST00000365510 MED1Q15648 1581 aaPredicted RBP10.09□□□□□ -0.79
RNU1-55P-201ENST00000365510 VWDEQ8N2E2 1590 aa10.09□□□□□ -0.79
RNU1-55P-201ENST00000365510 TXNDC2Q86VQ3 553 aa10.08□□□□□ -0.8
RNU1-55P-201ENST00000365510 RAB3GAP2Q9H2M9 1393 aa10.08□□□□□ -0.8
RNU1-55P-201ENST00000365510 DUOX2Q9NRD8 1548 aa10.07□□□□□ -0.8
RNU1-55P-201ENST00000365510 PZPP20742 1482 aa10.07□□□□□ -0.8
RNU1-55P-201ENST00000365510 ERBINQ96RT1 1412 aa10.07□□□□□ -0.8
RNU1-55P-201ENST00000365510 ANKRD50Q9ULJ7 1429 aa10.07□□□□□ -0.8
RNU1-55P-201ENST00000365510 ACIN1Q9UKV3 1341 aaKnown RBP10.06□□□□□ -0.8
RNU1-55P-201ENST00000365510 UGGT1Q9NYU2 1555 aa10.05□□□□□ -0.8
RNU1-55P-201ENST00000365510 LRRC7Q96NW7 1537 aa10.05□□□□□ -0.8
RNU1-55P-201ENST00000365510 POLR1AO95602 1720 aaPredicted RBP10.04□□□□□ -0.8
RNU1-55P-201ENST00000365510 HRCP23327 699 aa10.04□□□□□ -0.8
RNU1-55P-201ENST00000365510 POTEAQ6S8J7 498 aa10.04□□□□□ -0.8
RNU1-55P-201ENST00000365510 SLC26A8Q96RN1 970 aa10.04□□□□□ -0.8
RNU1-55P-201ENST00000365510 KDM5DQ9BY66 1539 aa10.03□□□□□ -0.8
RNU1-55P-201ENST00000365510 CPS1P31327 1500 aa10.02□□□□□ -0.8
RNU1-55P-201ENST00000365510 FAM135AQ9P2D6 1515 aa10.02□□□□□ -0.8
RNU1-55P-201ENST00000365510 IDI1Q13907 227 aa10.02□□□□□ -0.81
RNU1-55P-201ENST00000365510 EIF2AK4Q9P2K8 1649 aaKnown RBP10.02□□□□□ -0.81
RNU1-55P-201ENST00000365510 ABCC3O15438 1527 aa10.02□□□□□ -0.81
RNU1-55P-201ENST00000365510 MED14O60244 1454 aa10.01□□□□□ -0.81
RNU1-55P-201ENST00000365510 ERVK-7P63135 1459 aa10.01□□□□□ -0.81
RNU1-55P-201ENST00000365510 CEP152O94986 1710 aa10.01□□□□□ -0.81
RNU1-55P-201ENST00000365510 NLRP1Q9C000 1473 aa10□□□□□ -0.81
RNU1-55P-201ENST00000365510 NUTM2DQ5VT03 806 aaPredicted RBP10□□□□□ -0.81
RNU1-55P-201ENST00000365510 PROSER2Q86WR7 435 aaPredicted RBP10□□□□□ -0.81
RNU1-55P-201ENST00000365510 STAG3Q9UJ98 1225 aa10□□□□□ -0.81
RNU1-55P-201ENST00000365510 IQGAP1P46940 1657 aa9.99□□□□□ -0.81
RNU1-55P-201ENST00000365510 BCANQ96GW7 911 aa9.99□□□□□ -0.81
RNU1-55P-201ENST00000365510 UNC13BO14795 1591 aa9.99□□□□□ -0.81
RNU1-55P-201ENST00000365510 MROH1Q8NDA8 1641 aa9.99□□□□□ -0.81
RNU1-55P-201ENST00000365510 XIRP1Q702N8 1843 aaKnown RBP9.98□□□□□ -0.81
RNU1-55P-201ENST00000365510 PRDM15P57071 1507 aaPredicted RBP9.97□□□□□ -0.81
RNU1-55P-201ENST00000365510 DEPDC5O75140 1603 aa9.97□□□□□ -0.81
RNU1-55P-201ENST00000365510 RNF17Q9BXT8 1623 aaKnown RBP9.97□□□□□ -0.81
RNU1-55P-201ENST00000365510 TRIM52Q96A61 297 aa9.97□□□□□ -0.81
RNU1-55P-201ENST00000365510 TMEM94Q12767 1356 aa9.97□□□□□ -0.81
RNU1-55P-201ENST00000365510 DHX57Q6P158 1386 aaKnown RBP9.97□□□□□ -0.81
RNU1-55P-201ENST00000365510 UBR1Q8IWV7 1749 aa9.96□□□□□ -0.81
RNU1-55P-201ENST00000365510 CCER1Q8TC90 406 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms