RNA–Protein interactions for RNA: ENST00000364313.1

RNVU1-3-201, Transcript of RNA, variant U1 small nuclear 3, humanhuman

BASIC

Gene RNVU1-3, Length 161 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-3-201ENST00000364313 BANK1Q8NDB2 785 aa6.88□□□□□ -1.31
RNVU1-3-201ENST00000364313 PTCD2Q8WV60 388 aaKnown RBP6.88□□□□□ -1.31
RNVU1-3-201ENST00000364313 DDX12PQ92771 950 aa6.88□□□□□ -1.31
RNVU1-3-201ENST00000364313 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.88□□□□□ -1.31
RNVU1-3-201ENST00000364313 SPDYE5A6NIY4 337 aa6.87□□□□□ -1.31
RNVU1-3-201ENST00000364313 EVI5O60447 810 aa6.87□□□□□ -1.31
RNVU1-3-201ENST00000364313 EPAS1Q99814 870 aa6.87□□□□□ -1.31
RNVU1-3-201ENST00000364313 SSTR3P32745 418 aaPredicted RBP6.86□□□□□ -1.31
RNVU1-3-201ENST00000364313 SOCS7O14512 581 aa6.85□□□□□ -1.31
RNVU1-3-201ENST00000364313 RAD21O60216 631 aa6.85□□□□□ -1.31
RNVU1-3-201ENST00000364313 SLC34A2O95436 690 aa6.85□□□□□ -1.31
RNVU1-3-201ENST00000364313 EN1Q05925 392 aaPredicted RBP6.85□□□□□ -1.31
RNVU1-3-201ENST00000364313 L3MBTL3Q96JM7 780 aaPredicted RBP6.85□□□□□ -1.31
RNVU1-3-201ENST00000364313 PHF14O94880 888 aa6.84□□□□□ -1.31
RNVU1-3-201ENST00000364313 UPF1Q92900 1129 aaKnown RBP eCLIP6.84□□□□□ -1.31
RNVU1-3-201ENST00000364313 PLSCR2Q9NRY7 297 aa6.84□□□□□ -1.31
RNVU1-3-201ENST00000364313 FAM217BQ9NTX9 383 aaPredicted RBP6.84□□□□□ -1.31
RNVU1-3-201ENST00000364313 G3V3G9 751 aa6.83□□□□□ -1.32
RNVU1-3-201ENST00000364313 DIXDC1Q155Q3 683 aa6.83□□□□□ -1.32
RNVU1-3-201ENST00000364313 TMEM92Q6UXU6 159 aa6.83□□□□□ -1.32
RNVU1-3-201ENST00000364313 CCDC97Q96F63 343 aaPredicted RBP6.83□□□□□ -1.32
RNVU1-3-201ENST00000364313 PHOX2BQ99453 314 aa6.83□□□□□ -1.32
RNVU1-3-201ENST00000364313 ZNF777Q9ULD5 760 aaPredicted RBP6.83□□□□□ -1.32
RNVU1-3-201ENST00000364313 OATP04181 439 aa6.82□□□□□ -1.32
RNVU1-3-201ENST00000364313 TUSC1Q2TAM9 212 aa6.82□□□□□ -1.32
RNVU1-3-201ENST00000364313 PPP2R2DQ66LE6 453 aa6.82□□□□□ -1.32
RNVU1-3-201ENST00000364313 BEGAINQ9BUH8 593 aa6.82□□□□□ -1.32
RNVU1-3-201ENST00000364313 COG6Q9Y2V7 657 aa6.82□□□□□ -1.32
RNVU1-3-201ENST00000364313 PPP1R15AO75807 674 aaPredicted RBP6.81□□□□□ -1.32
RNVU1-3-201ENST00000364313 MDM2Q00987 491 aaPredicted RBP6.81□□□□□ -1.32
RNVU1-3-201ENST00000364313 ASTLQ6HA08 431 aaPredicted RBP6.81□□□□□ -1.32
RNVU1-3-201ENST00000364313 PROCA1Q8NCQ7 364 aaPredicted RBP6.81□□□□□ -1.32
RNVU1-3-201ENST00000364313 POM121Q96HA1 1249 aa6.81□□□□□ -1.32
RNVU1-3-201ENST00000364313 ATN1P54259 1190 aaPredicted RBP6.8□□□□□ -1.32
RNVU1-3-201ENST00000364313 TMEM259Q4ZIN3 620 aa6.8□□□□□ -1.32
RNVU1-3-201ENST00000364313 MYSM1Q5VVJ2 828 aa6.8□□□□□ -1.32
RNVU1-3-201ENST00000364313 CERKQ8TCT0 537 aa6.8□□□□□ -1.32
RNVU1-3-201ENST00000364313 GALR2O43603 387 aaPredicted RBP6.79□□□□□ -1.32
RNVU1-3-201ENST00000364313 METTL3Q86U44 580 aaKnown RBP6.79□□□□□ -1.32
RNVU1-3-201ENST00000364313 RBM27Q9P2N5 1060 aaKnown RBP6.79□□□□□ -1.32
RNVU1-3-201ENST00000364313 ATMINO43313 823 aaPredicted RBP6.78□□□□□ -1.32
RNVU1-3-201ENST00000364313 PDE4CQ08493 712 aa6.78□□□□□ -1.32
RNVU1-3-201ENST00000364313 TTC13Q8NBP0 860 aa6.78□□□□□ -1.32
RNVU1-3-201ENST00000364313 SLAIN1Q8ND83 568 aa6.78□□□□□ -1.32
RNVU1-3-201ENST00000364313 CDHR5Q9HBB8 845 aa6.78□□□□□ -1.32
RNVU1-3-201ENST00000364313 RFC5P40937 340 aa6.77□□□□□ -1.33
RNVU1-3-201ENST00000364313 CLK2P49760 499 aaKnown RBP6.77□□□□□ -1.33
RNVU1-3-201ENST00000364313 PXYLP1Q8TE99 480 aa6.77□□□□□ -1.33
RNVU1-3-201ENST00000364313 FBXW7Q969H0 707 aa6.77□□□□□ -1.33
RNVU1-3-201ENST00000364313 TYW1BQ6NUM6 668 aa6.76□□□□□ -1.33
RNVU1-3-201ENST00000364313 POLR3EQ9NVU0 708 aa6.76□□□□□ -1.33
RNVU1-3-201ENST00000364313 PCDHGA10Q9Y5H3 936 aa6.76□□□□□ -1.33
RNVU1-3-201ENST00000364313 MAP3K7O43318 606 aa6.75□□□□□ -1.33
RNVU1-3-201ENST00000364313 PLCG2P16885 1265 aa6.75□□□□□ -1.33
RNVU1-3-201ENST00000364313 GJA5P36382 358 aa6.75□□□□□ -1.33
RNVU1-3-201ENST00000364313 ZNF330Q9Y3S2 320 aaPredicted RBP6.75□□□□□ -1.33
RNVU1-3-201ENST00000364313 ADGRG1Q9Y653 693 aa6.75□□□□□ -1.33
RNVU1-3-201ENST00000364313 KDM4FA0A1W2PPD8 638 aa6.74□□□□□ -1.33
RNVU1-3-201ENST00000364313 TBC1D2Q9BYX2 928 aa6.74□□□□□ -1.33
RNVU1-3-201ENST00000364313 SNRKQ9NRH2 765 aa6.74□□□□□ -1.33
RNVU1-3-201ENST00000364313 PATL2C9JE40 543 aaKnown RBP6.73□□□□□ -1.33
RNVU1-3-201ENST00000364313 RETREG2Q8NC44 543 aa6.73□□□□□ -1.33
RNVU1-3-201ENST00000364313 RGS22Q8NE09 1264 aa6.73□□□□□ -1.33
RNVU1-3-201ENST00000364313 JPH4Q96JJ6 628 aa6.73□□□□□ -1.33
RNVU1-3-201ENST00000364313 WWC1Q8IX03 1113 aa6.72□□□□□ -1.33
RNVU1-3-201ENST00000364313 SPTLC1O15269 473 aa6.71□□□□□ -1.34
RNVU1-3-201ENST00000364313 TSR1Q2NL82 804 aaKnown RBP6.71□□□□□ -1.34
RNVU1-3-201ENST00000364313 MTMR14Q8NCE2 650 aa6.71□□□□□ -1.34
RNVU1-3-201ENST00000364313 PRM3Q9NNZ6 103 aa6.71□□□□□ -1.34
RNVU1-3-201ENST00000364313 IRF5Q13568 498 aa6.7□□□□□ -1.34
RNVU1-3-201ENST00000364313 FBXO31Q5XUX0 539 aaPredicted RBP6.7□□□□□ -1.34
RNVU1-3-201ENST00000364313 ACIN1Q9UKV3 1341 aaKnown RBP6.7□□□□□ -1.34
RNVU1-3-201ENST00000364313 C6orf132Q5T0Z8 1188 aa6.69□□□□□ -1.34
RNVU1-3-201ENST00000364313 PADI6Q6TGC4 694 aa6.69□□□□□ -1.34
RNVU1-3-201ENST00000364313 RIC3Q7Z5B4 369 aa6.69□□□□□ -1.34
RNVU1-3-201ENST00000364313 AEBP1Q8IUX7 1158 aa6.69□□□□□ -1.34
RNVU1-3-201ENST00000364313 LIMD1Q9UGP4 676 aa6.69□□□□□ -1.34
RNVU1-3-201ENST00000364313 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.68□□□□□ -1.34
RNVU1-3-201ENST00000364313 FOSBP53539 338 aa6.68□□□□□ -1.34
RNVU1-3-201ENST00000364313 TMCO4Q5TGY1 634 aa6.68□□□□□ -1.34
RNVU1-3-201ENST00000364313 RBM46Q8TBY0 533 aaKnown RBP6.68□□□□□ -1.34
RNVU1-3-201ENST00000364313 SPIRE2Q8WWL2 714 aa6.68□□□□□ -1.34
RNVU1-3-201ENST00000364313 LILRB3O75022 631 aa6.67□□□□□ -1.34
RNVU1-3-201ENST00000364313 CD46P15529 392 aa6.67□□□□□ -1.34
RNVU1-3-201ENST00000364313 RBM33Q96EV2 1170 aaKnown RBP6.67□□□□□ -1.34
RNVU1-3-201ENST00000364313 GDPD2Q9HCC8 539 aa6.67□□□□□ -1.34
RNVU1-3-201ENST00000364313 USTQ9Y2C2 406 aa6.67□□□□□ -1.34
RNVU1-3-201ENST00000364313 SRPK2P78362 688 aaKnown RBP6.66□□□□□ -1.34
RNVU1-3-201ENST00000364313 RSBN1LQ6PCB5 846 aaPredicted RBP6.66□□□□□ -1.34
RNVU1-3-201ENST00000364313 CALR3Q96L12 384 aaKnown RBP6.66□□□□□ -1.34
RNVU1-3-201ENST00000364313 PCDHGA4Q9Y5G9 962 aa6.66□□□□□ -1.34
RNVU1-3-201ENST00000364313 BRD1O95696 1058 aa6.65□□□□□ -1.34
RNVU1-3-201ENST00000364313 MFAP1P55081 439 aaKnown RBP6.65□□□□□ -1.34
RNVU1-3-201ENST00000364313 PRSS12P56730 875 aa6.65□□□□□ -1.34
RNVU1-3-201ENST00000364313 KCNA1Q09470 495 aa6.65□□□□□ -1.34
RNVU1-3-201ENST00000364313 FAM161AQ3B820 660 aa6.65□□□□□ -1.34
RNVU1-3-201ENST00000364313 PRPF38BQ5VTL8 546 aaKnown RBP6.65□□□□□ -1.34
RNVU1-3-201ENST00000364313 GLMNQ92990 594 aa6.65□□□□□ -1.34
RNVU1-3-201ENST00000364313 PBXIP1Q96AQ6 731 aa6.65□□□□□ -1.34
RNVU1-3-201ENST00000364313 ATP1B4Q9UN42 357 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms