RNA–Protein interactions for RNA: ENST00000362839.1

RNU4-23P-201, Transcript of RNA, U4 small nuclear 23, pseudogene, humanhuman

BASIC

Gene RNU4-23P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-23P-201ENST00000362839 TTLL12Q14166 644 aaPredicted RBP12.18□□□□□ -0.46
RNU4-23P-201ENST00000362839 FBXW7Q969H0 707 aa12.17□□□□□ -0.46
RNU4-23P-201ENST00000362839 POTEJP0CG39 1038 aa12.16□□□□□ -0.46
RNU4-23P-201ENST00000362839 FOSBP53539 338 aa12.16□□□□□ -0.46
RNU4-23P-201ENST00000362839 GIGYF2Q6Y7W6 1299 aaKnown RBP12.15□□□□□ -0.46
RNU4-23P-201ENST00000362839 REPIN1Q9BWE0 567 aaKnown RBP12.15□□□□□ -0.46
RNU4-23P-201ENST00000362839 MS4A1P11836 297 aa12.12□□□□□ -0.47
RNU4-23P-201ENST00000362839 HOXB3P14651 431 aaPredicted RBP12.12□□□□□ -0.47
RNU4-23P-201ENST00000362839 KHSRPQ92945 711 aaKnown RBP eCLIP12.12□□□□□ -0.47
RNU4-23P-201ENST00000362839 PHOX2BQ99453 314 aa12.12□□□□□ -0.47
RNU4-23P-201ENST00000362839 ARSIQ5FYB1 569 aa12.11□□□□□ -0.47
RNU4-23P-201ENST00000362839 C6orf132Q5T0Z8 1188 aa12.11□□□□□ -0.47
RNU4-23P-201ENST00000362839 TMUB1Q9BVT8 246 aa12.11□□□□□ -0.47
RNU4-23P-201ENST00000362839 NUDT7P0C024 238 aa12.1□□□□□ -0.47
RNU4-23P-201ENST00000362839 DOK7Q18PE1 504 aa12.1□□□□□ -0.47
RNU4-23P-201ENST00000362839 ZNF454Q8N9F8 522 aa12.1□□□□□ -0.47
RNU4-23P-201ENST00000362839 ZDHHC16Q969W1 377 aa12.1□□□□□ -0.47
RNU4-23P-201ENST00000362839 POTEB2H3BUK9 544 aa12.09□□□□□ -0.47
RNU4-23P-201ENST00000362839 CLCN1P35523 988 aa12.08□□□□□ -0.48
RNU4-23P-201ENST00000362839 FAM161AQ3B820 660 aa12.08□□□□□ -0.48
RNU4-23P-201ENST00000362839 CERKQ8TCT0 537 aa12.08□□□□□ -0.48
RNU4-23P-201ENST00000362839 MDM2Q00987 491 aaPredicted RBP12.07□□□□□ -0.48
RNU4-23P-201ENST00000362839 GPR153Q6NV75 609 aa12.07□□□□□ -0.48
RNU4-23P-201ENST00000362839 GOPCQ9HD26 462 aa12.07□□□□□ -0.48
RNU4-23P-201ENST00000362839 PADI6Q6TGC4 694 aa12.06□□□□□ -0.48
RNU4-23P-201ENST00000362839 ADAM33Q9BZ11 813 aa12.06□□□□□ -0.48
RNU4-23P-201ENST00000362839 ZSWIM6Q9HCJ5 1215 aa12.06□□□□□ -0.48
RNU4-23P-201ENST00000362839 GPCPD1Q9NPB8 672 aa12.06□□□□□ -0.48
RNU4-23P-201ENST00000362839 RIMBP2O15034 1052 aa12.04□□□□□ -0.48
RNU4-23P-201ENST00000362839 OATP04181 439 aa12.04□□□□□ -0.48
RNU4-23P-201ENST00000362839 METTL3Q86U44 580 aaKnown RBP12.04□□□□□ -0.48
RNU4-23P-201ENST00000362839 TTC13Q8NBP0 860 aa12.04□□□□□ -0.48
RNU4-23P-201ENST00000362839 ADGRG1Q9Y653 693 aa12.03□□□□□ -0.48
RNU4-23P-201ENST00000362839 SUPT5HO00267 1087 aaKnown RBP12.02□□□□□ -0.49
RNU4-23P-201ENST00000362839 SSTR3P32745 418 aaPredicted RBP12.02□□□□□ -0.49
RNU4-23P-201ENST00000362839 RBM27Q9P2N5 1060 aaKnown RBP12.02□□□□□ -0.49
RNU4-23P-201ENST00000362839 PXYLP1Q8TE99 480 aa12.01□□□□□ -0.49
RNU4-23P-201ENST00000362839 NLRP7Q8WX94 980 aa12□□□□□ -0.49
RNU4-23P-201ENST00000362839 SCUBE2Q9NQ36 999 aa12□□□□□ -0.49
RNU4-23P-201ENST00000362839 ZNF710Q8N1W2 664 aa11.99□□□□□ -0.49
RNU4-23P-201ENST00000362839 ZMYND15Q9H091 742 aa11.99□□□□□ -0.49
RNU4-23P-201ENST00000362839 LHX6Q9UPM6 363 aa11.99□□□□□ -0.49
RNU4-23P-201ENST00000362839 PRSS12P56730 875 aa11.98□□□□□ -0.49
RNU4-23P-201ENST00000362839 MAMSTRQ6ZN01 415 aa11.98□□□□□ -0.49
RNU4-23P-201ENST00000362839 FAM217BQ9NTX9 383 aaPredicted RBP11.98□□□□□ -0.49
RNU4-23P-201ENST00000362839 SH3D19Q5HYK7 790 aa11.97□□□□□ -0.49
RNU4-23P-201ENST00000362839 CDCA7LQ96GN5 454 aa11.97□□□□□ -0.49
RNU4-23P-201ENST00000362839 ARXQ96QS3 562 aa11.97□□□□□ -0.49
RNU4-23P-201ENST00000362839 PCMTD1Q96MG8 357 aaPredicted RBP11.96□□□□□ -0.49
RNU4-23P-201ENST00000362839 BEGAINQ9BUH8 593 aa11.96□□□□□ -0.49
RNU4-23P-201ENST00000362839 COL9A1P20849 921 aa11.94□□□□□ -0.5
RNU4-23P-201ENST00000362839 PPP4R3BQ5MIZ7 849 aa11.94□□□□□ -0.5
RNU4-23P-201ENST00000362839 RBM46Q8TBY0 533 aaKnown RBP11.93□□□□□ -0.5
RNU4-23P-201ENST00000362839 BCL2L12Q9HB09 334 aa11.93□□□□□ -0.5
RNU4-23P-201ENST00000362839 FAM198AQ9UFP1 575 aa11.93□□□□□ -0.5
RNU4-23P-201ENST00000362839 PSDA5PKW4 1024 aaPredicted RBP11.92□□□□□ -0.5
RNU4-23P-201ENST00000362839 SKIV2LQ15477 1246 aaKnown RBP11.92□□□□□ -0.5
RNU4-23P-201ENST00000362839 RSPH6AQ9H0K4 717 aa11.92□□□□□ -0.5
RNU4-23P-201ENST00000362839 ONECUT3O60422 494 aaPredicted RBP11.9□□□□□ -0.5
RNU4-23P-201ENST00000362839 FLIIQ13045 1269 aa11.9□□□□□ -0.5
RNU4-23P-201ENST00000362839 EYA1Q99502 592 aa11.88□□□□□ -0.51
RNU4-23P-201ENST00000362839 TSKSQ9UJT2 592 aa11.88□□□□□ -0.51
RNU4-23P-201ENST00000362839 PPP1R3GB7ZBB8 358 aa11.87□□□□□ -0.51
RNU4-23P-201ENST00000362839 PTPREP23469 700 aa11.87□□□□□ -0.51
RNU4-23P-201ENST00000362839 PROCA1Q8NCQ7 364 aaPredicted RBP11.87□□□□□ -0.51
RNU4-23P-201ENST00000362839 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.86□□□□□ -0.51
RNU4-23P-201ENST00000362839 RCCD1A6NED2 376 aa11.86□□□□□ -0.51
RNU4-23P-201ENST00000362839 SNPHO15079 494 aa11.86□□□□□ -0.51
RNU4-23P-201ENST00000362839 HOXB1P14653 301 aaPredicted RBP11.86□□□□□ -0.51
RNU4-23P-201ENST00000362839 POLR3EQ9NVU0 708 aa11.86□□□□□ -0.51
RNU4-23P-201ENST00000362839 C3orf80F5H4A9 247 aa11.85□□□□□ -0.51
RNU4-23P-201ENST00000362839 MYSM1Q5VVJ2 828 aa11.85□□□□□ -0.51
RNU4-23P-201ENST00000362839 NUDT18Q6ZVK8 323 aa11.83□□□□□ -0.52
RNU4-23P-201ENST00000362839 TRIM6-TRIM34B2RNG4 842 aa11.82□□□□□ -0.52
RNU4-23P-201ENST00000362839 TBC1D2Q9BYX2 928 aa11.82□□□□□ -0.52
RNU4-23P-201ENST00000362839 HOMEZQ8IX15 550 aa11.81□□□□□ -0.52
RNU4-23P-201ENST00000362839 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.81□□□□□ -0.52
RNU4-23P-201ENST00000362839 NBPF26B4DH59 902 aa11.8□□□□□ -0.52
RNU4-23P-201ENST00000362839 TATDN2Q93075 761 aa11.8□□□□□ -0.52
RNU4-23P-201ENST00000362839 ATP1B4Q9UN42 357 aaPredicted RBP11.8□□□□□ -0.52
RNU4-23P-201ENST00000362839 PACS2Q86VP3 889 aa11.79□□□□□ -0.52
RNU4-23P-201ENST00000362839 PNMA3Q9UL41 463 aa11.79□□□□□ -0.52
RNU4-23P-201ENST00000362839 CD46P15529 392 aa11.78□□□□□ -0.52
RNU4-23P-201ENST00000362839 DNAJB2P25686 324 aa11.78□□□□□ -0.52
RNU4-23P-201ENST00000362839 CLK2P49760 499 aaKnown RBP11.78□□□□□ -0.52
RNU4-23P-201ENST00000362839 DIXDC1Q155Q3 683 aa11.78□□□□□ -0.52
RNU4-23P-201ENST00000362839 MCM6Q14566 821 aa11.77□□□□□ -0.53
RNU4-23P-201ENST00000362839 PROX2Q3B8N5 592 aa11.77□□□□□ -0.53
RNU4-23P-201ENST00000362839 KCNK17Q96T54 332 aa11.77□□□□□ -0.53
RNU4-23P-201ENST00000362839 SULF1Q8IWU6 871 aa11.76□□□□□ -0.53
RNU4-23P-201ENST00000362839 SPIRE2Q8WWL2 714 aa11.76□□□□□ -0.53
RNU4-23P-201ENST00000362839 TMEM134Q9H6X4 195 aa11.76□□□□□ -0.53
RNU4-23P-201ENST00000362839 DDX11L8A8MPP1 907 aa11.74□□□□□ -0.53
RNU4-23P-201ENST00000362839 SMAPO00193 183 aa11.74□□□□□ -0.53
RNU4-23P-201ENST00000362839 CLUAP1Q96AJ1 413 aa11.74□□□□□ -0.53
RNU4-23P-201ENST00000362839 OTUD5Q96G74 571 aa11.74□□□□□ -0.53
RNU4-23P-201ENST00000362839 LIMD1Q9UGP4 676 aa11.74□□□□□ -0.53
RNU4-23P-201ENST00000362839 A6NJR5 290 aa11.73□□□□□ -0.53
RNU4-23P-201ENST00000362839 UBTFP17480 764 aaKnown RBP11.73□□□□□ -0.53
RNU4-23P-201ENST00000362839 FBXO31Q5XUX0 539 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms