RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 PLEKHG5O94827 1062 aa22.46■■□□□ 1.19
SMG5-201ENST00000361813 PTMSP20962 102 aa22.46■■□□□ 1.19
SMG5-201ENST00000361813 CCDC144AA2RUR9 1427 aa22.45■■□□□ 1.18
SMG5-201ENST00000361813 BRD4O60885 1362 aaPredicted RBP22.44■■□□□ 1.18
SMG5-201ENST00000361813 FGD5Q6ZNL6 1462 aa22.44■■□□□ 1.18
SMG5-201ENST00000361813 CALD1Q05682 793 aaKnown RBP22.43■■□□□ 1.18
SMG5-201ENST00000361813 KANK1Q14678 1352 aa22.43■■□□□ 1.18
SMG5-201ENST00000361813 STK26Q9P289 416 aa22.43■■□□□ 1.18
SMG5-201ENST00000361813 NCOA2Q15596 1464 aa22.43■■□□□ 1.18
SMG5-201ENST00000361813 DDX11L8A8MPP1 907 aa22.42■■□□□ 1.18
SMG5-201ENST00000361813 ADAMTS8Q9UP79 889 aa22.41■■□□□ 1.18
SMG5-201ENST00000361813 SMG6Q86US8 1419 aaKnown RBP22.41■■□□□ 1.18
SMG5-201ENST00000361813 CASKIN1Q8WXD9 1431 aa22.41■■□□□ 1.18
SMG5-201ENST00000361813 C11orf95C9JLR9 678 aaPredicted RBP22.41■■□□□ 1.18
SMG5-201ENST00000361813 C14orf37Q86TY3 774 aa22.4■■□□□ 1.18
SMG5-201ENST00000361813 CARMIL2Q6F5E8 1435 aa22.39■■□□□ 1.18
SMG5-201ENST00000361813 CHAF1AQ13111 956 aaPredicted RBP22.38■■□□□ 1.17
SMG5-201ENST00000361813 ZRSR1Q15695 479 aaKnown RBP22.38■■□□□ 1.17
SMG5-201ENST00000361813 HFM1A2PYH4 1435 aa22.37■■□□□ 1.17
SMG5-201ENST00000361813 MCCP23508 829 aa22.37■■□□□ 1.17
SMG5-201ENST00000361813 CFAP44Q96MT7 982 aa22.36■■□□□ 1.17
SMG5-201ENST00000361813 RAD54L2Q9Y4B4 1467 aa22.36■■□□□ 1.17
SMG5-201ENST00000361813 DDX49Q9Y6V7 483 aaKnown RBP22.36■■□□□ 1.17
SMG5-201ENST00000361813 EIF3AQ14152 1382 aaKnown RBP22.36■■□□□ 1.17
SMG5-201ENST00000361813 GGT6Q6P531 493 aa22.36■■□□□ 1.17
SMG5-201ENST00000361813 PANK1Q8TE04 598 aa22.36■■□□□ 1.17
SMG5-201ENST00000361813 KCNJ4P48050 445 aa22.35■■□□□ 1.17
SMG5-201ENST00000361813 KIAA2012Q0VF49 1180 aa22.35■■□□□ 1.17
SMG5-201ENST00000361813 CHMP5Q9NZZ3 219 aa22.35■■□□□ 1.17
SMG5-201ENST00000361813 ZKSCAN2Q63HK3 967 aa22.34■■□□□ 1.17
SMG5-201ENST00000361813 CFTRP13569 1480 aa22.34■■□□□ 1.17
SMG5-201ENST00000361813 CUX1P39880 1505 aa22.34■■□□□ 1.17
SMG5-201ENST00000361813 PDS5BQ9NTI5 1447 aa22.34■■□□□ 1.17
SMG5-201ENST00000361813 GOLGA6L4A6NEF3 574 aa22.34■■□□□ 1.17
SMG5-201ENST00000361813 SOX12O15370 315 aa22.34■■□□□ 1.17
SMG5-201ENST00000361813 TIAM1Q13009 1591 aa22.33■■□□□ 1.17
SMG5-201ENST00000361813 FANCD2Q9BXW9 1451 aa22.33■■□□□ 1.17
SMG5-201ENST00000361813 OS9Q13438 667 aaPredicted RBP22.33■■□□□ 1.16
SMG5-201ENST00000361813 SKAP1Q86WV1 359 aa22.33■■□□□ 1.16
SMG5-201ENST00000361813 FOXD4L5Q5VV16 416 aaPredicted RBP22.32■■□□□ 1.16
SMG5-201ENST00000361813 FOXD4L4Q8WXT5 416 aaPredicted RBP22.32■■□□□ 1.16
SMG5-201ENST00000361813 TRAK1Q9UPV9 953 aa22.32■■□□□ 1.16
SMG5-201ENST00000361813 EFCAB2Q5VUJ9 269 aa22.32■■□□□ 1.16
SMG5-201ENST00000361813 RSPH4AQ5TD94 716 aa22.31■■□□□ 1.16
SMG5-201ENST00000361813 KIF3BO15066 747 aa22.31■■□□□ 1.16
SMG5-201ENST00000361813 ANKRD45Q5TZF3 282 aa22.3■■□□□ 1.16
SMG5-201ENST00000361813 NOL8Q76FK4 1167 aaKnown RBP22.29■■□□□ 1.16
SMG5-201ENST00000361813 ELL2O00472 640 aaPredicted RBP22.28■■□□□ 1.16
SMG5-201ENST00000361813 DRC7Q8IY82 874 aa22.28■■□□□ 1.16
SMG5-201ENST00000361813 FYCO1Q9BQS8 1478 aa22.28■■□□□ 1.16
SMG5-201ENST00000361813 PRKCSHP14314 528 aaPredicted RBP22.28■■□□□ 1.16
SMG5-201ENST00000361813 JPH4Q96JJ6 628 aa22.27■■□□□ 1.16
SMG5-201ENST00000361813 HDGFL2Q7Z4V5 671 aaPredicted RBP22.27■■□□□ 1.16
SMG5-201ENST00000361813 FGD1P98174 961 aa22.26■■□□□ 1.15
SMG5-201ENST00000361813 SKOR2Q2VWA4 1001 aaPredicted RBP22.26■■□□□ 1.15
SMG5-201ENST00000361813 C22orf23Q9BZE7 217 aa22.26■■□□□ 1.15
SMG5-201ENST00000361813 HAP1P54257 671 aaPredicted RBP22.25■■□□□ 1.15
SMG5-201ENST00000361813 TAOK2Q9UL54 1235 aa22.25■■□□□ 1.15
SMG5-201ENST00000361813 NUTM2DQ5VT03 806 aaPredicted RBP22.25■■□□□ 1.15
SMG5-201ENST00000361813 NAIPQ13075 1403 aa22.25■■□□□ 1.15
SMG5-201ENST00000361813 NBPF1Q3BBV0 1214 aa22.24■■□□□ 1.15
SMG5-201ENST00000361813 SYAP1Q96A49 352 aaPredicted RBP22.24■■□□□ 1.15
SMG5-201ENST00000361813 MIA2Q96PC5 1412 aa22.24■■□□□ 1.15
SMG5-201ENST00000361813 DZIP1LQ8IYY4 767 aaKnown RBP22.24■■□□□ 1.15
SMG5-201ENST00000361813 TOP2BQ02880 1626 aa22.23■■□□□ 1.15
SMG5-201ENST00000361813 ERCC6Q03468 1493 aa22.23■■□□□ 1.15
SMG5-201ENST00000361813 ANKRD50Q9ULJ7 1429 aa22.22■■□□□ 1.15
SMG5-201ENST00000361813 BCAR3O75815 825 aa22.22■■□□□ 1.15
SMG5-201ENST00000361813 ST18O60284 1047 aa22.21■■□□□ 1.15
SMG5-201ENST00000361813 CDK11BP21127 795 aaKnown RBP22.2■■□□□ 1.14
SMG5-201ENST00000361813 FAM43AQ8N2R8 423 aa22.2■■□□□ 1.14
SMG5-201ENST00000361813 NAP1L2Q9ULW6 460 aaPredicted RBP22.2■■□□□ 1.14
SMG5-201ENST00000361813 TRAK2O60296 914 aa22.19■■□□□ 1.14
SMG5-201ENST00000361813 NGEFQ8N5V2 710 aa22.19■■□□□ 1.14
SMG5-201ENST00000361813 FOXD4L6Q3SYB3 417 aaPredicted RBP22.19■■□□□ 1.14
SMG5-201ENST00000361813 FOXD4L3Q6VB84 417 aaPredicted RBP22.19■■□□□ 1.14
SMG5-201ENST00000361813 LNPKQ9C0E8 428 aa22.19■■□□□ 1.14
SMG5-201ENST00000361813 PPP2R1AP30153 589 aa22.19■■□□□ 1.14
SMG5-201ENST00000361813 DDX19BQ9UMR2 479 aa22.19■■□□□ 1.14
SMG5-201ENST00000361813 SPAG9O60271 1321 aaKnown RBP22.19■■□□□ 1.14
SMG5-201ENST00000361813 AMER1Q5JTC6 1135 aaPredicted RBP22.18■■□□□ 1.14
SMG5-201ENST00000361813 KIAA1211Q6ZU35 1233 aa22.18■■□□□ 1.14
SMG5-201ENST00000361813 TRIM6-TRIM34B2RNG4 842 aa22.18■■□□□ 1.14
SMG5-201ENST00000361813 MRE11P49959 708 aa22.18■■□□□ 1.14
SMG5-201ENST00000361813 GAPVD1Q14C86 1478 aa22.17■■□□□ 1.14
SMG5-201ENST00000361813 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.17■■□□□ 1.14
SMG5-201ENST00000361813 SLC4A10Q6U841 1118 aa22.17■■□□□ 1.14
SMG5-201ENST00000361813 FAM13BQ9NYF5 915 aa22.17■■□□□ 1.14
SMG5-201ENST00000361813 RTF1Q92541 710 aaKnown RBP22.16■■□□□ 1.14
SMG5-201ENST00000361813 TERF2IPQ9NYB0 399 aa22.16■■□□□ 1.14
SMG5-201ENST00000361813 GOLGA6L6A8MZA4 724 aa22.15■■□□□ 1.14
SMG5-201ENST00000361813 RUNDC1Q96C34 613 aa22.15■■□□□ 1.14
SMG5-201ENST00000361813 PDZRN3Q9UPQ7 1066 aa22.14■■□□□ 1.14
SMG5-201ENST00000361813 C20orf194Q5TEA3 1177 aa22.14■■□□□ 1.13
SMG5-201ENST00000361813 NRDCO43847 1150 aa22.13■■□□□ 1.13
SMG5-201ENST00000361813 HMMRO75330 724 aa22.12■■□□□ 1.13
SMG5-201ENST00000361813 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.11■■□□□ 1.13
SMG5-201ENST00000361813 MAPKBP1O60336 1514 aa22.11■■□□□ 1.13
SMG5-201ENST00000361813 WASHC2CQ9Y4E1 1318 aa22.11■■□□□ 1.13
SMG5-201ENST00000361813 TCP11L2Q8N4U5 519 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms