RNA–Protein interactions for RNA: ENST00000361587.3

HIPK1-202, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best)

Gene HIPK1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-202ENST00000361587 SF3A1Q15459 793 aaKnown RBP13.12□□□□□ -0.31
HIPK1-202ENST00000361587 MLECQ14165 292 aa13.12□□□□□ -0.31
HIPK1-202ENST00000361587 CHMP3Q9Y3E7 222 aa13.12□□□□□ -0.31
HIPK1-202ENST00000361587 SOGA1O94964 1423 aa13.11□□□□□ -0.31
HIPK1-202ENST00000361587 GPS2Q13227 327 aa13.11□□□□□ -0.31
HIPK1-202ENST00000361587 TSR1Q2NL82 804 aaKnown RBP13.11□□□□□ -0.31
HIPK1-202ENST00000361587 MYBBP1AQ9BQG0 1328 aaKnown RBP13.1□□□□□ -0.31
HIPK1-202ENST00000361587 TPM2P07951 284 aa13.1□□□□□ -0.31
HIPK1-202ENST00000361587 CCDC70Q6NSX1 233 aa13.1□□□□□ -0.31
HIPK1-202ENST00000361587 ZNF330Q9Y3S2 320 aaPredicted RBP13.1□□□□□ -0.31
HIPK1-202ENST00000361587 TPM1P09493 284 aa13.09□□□□□ -0.31
HIPK1-202ENST00000361587 FAM161AQ3B820 660 aa13.09□□□□□ -0.31
HIPK1-202ENST00000361587 ARID3AQ99856 593 aa13.09□□□□□ -0.31
HIPK1-202ENST00000361587 MROH2BQ7Z745 1585 aa13.09□□□□□ -0.31
HIPK1-202ENST00000361587 GOLGA6L19H0YKK7 550 aa13.08□□□□□ -0.32
HIPK1-202ENST00000361587 SLC4A10Q6U841 1118 aa13.08□□□□□ -0.32
HIPK1-202ENST00000361587 H3BQV1 296 aa13.08□□□□□ -0.32
HIPK1-202ENST00000361587 HSP90AA2PQ14568 343 aaPredicted RBP13.08□□□□□ -0.32
HIPK1-202ENST00000361587 IFFO2Q5TF58 517 aa13.08□□□□□ -0.32
HIPK1-202ENST00000361587 LRRFIP1Q32MZ4 808 aaKnown RBP13.08□□□□□ -0.32
HIPK1-202ENST00000361587 TPD52L1Q16890 204 aaPredicted RBP13.07□□□□□ -0.32
HIPK1-202ENST00000361587 UACAQ9BZF9 1416 aa13.07□□□□□ -0.32
HIPK1-202ENST00000361587 FOXD1Q16676 465 aa13.07□□□□□ -0.32
HIPK1-202ENST00000361587 MARCH6O60337 910 aa13.06□□□□□ -0.32
HIPK1-202ENST00000361587 FAM184AQ8NB25 1140 aa13.06□□□□□ -0.32
HIPK1-202ENST00000361587 CCDC18Q5T9S5 1454 aa13.06□□□□□ -0.32
HIPK1-202ENST00000361587 E9PSI1 815 aa13.05□□□□□ -0.32
HIPK1-202ENST00000361587 NGEFQ8N5V2 710 aa13.05□□□□□ -0.32
HIPK1-202ENST00000361587 CLUAP1Q96AJ1 413 aa13.05□□□□□ -0.32
HIPK1-202ENST00000361587 DDX49Q9Y6V7 483 aaKnown RBP13.05□□□□□ -0.32
HIPK1-202ENST00000361587 CGNL1Q0VF96 1302 aa13.05□□□□□ -0.32
HIPK1-202ENST00000361587 EID1Q9Y6B2 187 aa13.05□□□□□ -0.32
HIPK1-202ENST00000361587 BECN2A8MW95 431 aa13.05□□□□□ -0.32
HIPK1-202ENST00000361587 KANK4Q5T7N3 995 aaPredicted RBP13.05□□□□□ -0.32
HIPK1-202ENST00000361587 NOL8Q76FK4 1167 aaKnown RBP13.05□□□□□ -0.32
HIPK1-202ENST00000361587 AMPHP49418 695 aa13.04□□□□□ -0.32
HIPK1-202ENST00000361587 CREBRFQ8IUR6 639 aa13.04□□□□□ -0.32
HIPK1-202ENST00000361587 FOXD4L1Q9NU39 408 aa13.04□□□□□ -0.32
HIPK1-202ENST00000361587 PRM3Q9NNZ6 103 aa13.04□□□□□ -0.32
HIPK1-202ENST00000361587 TOMM22Q9NS69 142 aa13.04□□□□□ -0.32
HIPK1-202ENST00000361587 G3V3G9 751 aa13.04□□□□□ -0.32
HIPK1-202ENST00000361587 DCAF8Q5TAQ9 597 aa13.04□□□□□ -0.32
HIPK1-202ENST00000361587 CCDC146Q8IYE0 955 aa13.04□□□□□ -0.32
HIPK1-202ENST00000361587 RUFY2Q8WXA3 655 aa13.04□□□□□ -0.32
HIPK1-202ENST00000361587 AKAP17AQ02040 695 aaKnown RBP13.03□□□□□ -0.32
HIPK1-202ENST00000361587 GSE1Q14687 1217 aa13.03□□□□□ -0.32
HIPK1-202ENST00000361587 ZKSCAN2Q63HK3 967 aa13.03□□□□□ -0.32
HIPK1-202ENST00000361587 L3MBTL2Q969R5 705 aa13.03□□□□□ -0.32
HIPK1-202ENST00000361587 CPLX2Q6PUV4 134 aaKnown RBP13.03□□□□□ -0.32
HIPK1-202ENST00000361587 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.03□□□□□ -0.32
HIPK1-202ENST00000361587 NGDNQ8NEJ9 315 aaKnown RBP13.02□□□□□ -0.32
HIPK1-202ENST00000361587 SYNE3Q6ZMZ3 975 aa13.02□□□□□ -0.32
HIPK1-202ENST00000361587 REC8O95072 547 aa13.02□□□□□ -0.33
HIPK1-202ENST00000361587 PDE4AP27815 886 aa13.02□□□□□ -0.33
HIPK1-202ENST00000361587 CCDC47Q96A33 483 aaKnown RBP13.01□□□□□ -0.33
HIPK1-202ENST00000361587 ROCK1Q13464 1354 aa13.01□□□□□ -0.33
HIPK1-202ENST00000361587 PDS5BQ9NTI5 1447 aa13.01□□□□□ -0.33
HIPK1-202ENST00000361587 ANKRD20A12PQ8NF67 263 aa13.01□□□□□ -0.33
HIPK1-202ENST00000361587 ZBED9Q6R2W3 1325 aa13□□□□□ -0.33
HIPK1-202ENST00000361587 KIF3BO15066 747 aa13□□□□□ -0.33
HIPK1-202ENST00000361587 FRAT2O75474 233 aaPredicted RBP13□□□□□ -0.33
HIPK1-202ENST00000361587 HOOK1Q9UJC3 728 aaKnown RBP13□□□□□ -0.33
HIPK1-202ENST00000361587 PES1O00541 588 aaKnown RBP13□□□□□ -0.33
HIPK1-202ENST00000361587 IPO7O95373 1038 aaKnown RBP13□□□□□ -0.33
HIPK1-202ENST00000361587 RRP1P56182 461 aaKnown RBP13□□□□□ -0.33
HIPK1-202ENST00000361587 SMARCA2P51531 1590 aa13□□□□□ -0.33
HIPK1-202ENST00000361587 RILPL2Q969X0 211 aa12.99□□□□□ -0.33
HIPK1-202ENST00000361587 DIAPH3Q9NSV4 1193 aa12.99□□□□□ -0.33
HIPK1-202ENST00000361587 TRHP20396 242 aaPredicted RBP12.99□□□□□ -0.33
HIPK1-202ENST00000361587 ANKRD45Q5TZF3 282 aa12.99□□□□□ -0.33
HIPK1-202ENST00000361587 TEX35Q5T0J7 233 aa12.99□□□□□ -0.33
HIPK1-202ENST00000361587 TRIM29Q14134 588 aa12.99□□□□□ -0.33
HIPK1-202ENST00000361587 CCDC144AA2RUR9 1427 aa12.98□□□□□ -0.33
HIPK1-202ENST00000361587 ZKSCAN1P17029 563 aaPredicted RBP12.98□□□□□ -0.33
HIPK1-202ENST00000361587 VPS53Q5VIR6 699 aa12.98□□□□□ -0.33
HIPK1-202ENST00000361587 DDX19BQ9UMR2 479 aa12.98□□□□□ -0.33
HIPK1-202ENST00000361587 AMOTL1Q8IY63 956 aa12.98□□□□□ -0.33
HIPK1-202ENST00000361587 TOP2AP11388 1531 aaKnown RBP12.98□□□□□ -0.33
HIPK1-202ENST00000361587 FANCIQ9NVI1 1328 aa12.97□□□□□ -0.33
HIPK1-202ENST00000361587 GTF2E1P29083 439 aaPredicted RBP12.97□□□□□ -0.33
HIPK1-202ENST00000361587 AAMPQ13685 434 aa12.97□□□□□ -0.33
HIPK1-202ENST00000361587 FOXD4L5Q5VV16 416 aaPredicted RBP12.97□□□□□ -0.33
HIPK1-202ENST00000361587 FOXD4L4Q8WXT5 416 aaPredicted RBP12.97□□□□□ -0.33
HIPK1-202ENST00000361587 PDE4CQ08493 712 aa12.96□□□□□ -0.33
HIPK1-202ENST00000361587 CCAR2Q8N163 923 aaKnown RBP12.96□□□□□ -0.33
HIPK1-202ENST00000361587 WASHC2CQ9Y4E1 1318 aa12.96□□□□□ -0.33
HIPK1-202ENST00000361587 C1orf141Q5JVX7 400 aa12.96□□□□□ -0.33
HIPK1-202ENST00000361587 CHMP5Q9NZZ3 219 aa12.96□□□□□ -0.33
HIPK1-202ENST00000361587 CCDC88BA6NC98 1476 aa12.96□□□□□ -0.34
HIPK1-202ENST00000361587 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.96□□□□□ -0.34
HIPK1-202ENST00000361587 RAPGEF2Q9Y4G8 1499 aa12.96□□□□□ -0.34
HIPK1-202ENST00000361587 NEXNQ0ZGT2 675 aa12.96□□□□□ -0.34
HIPK1-202ENST00000361587 RNF20Q5VTR2 975 aa12.96□□□□□ -0.34
HIPK1-202ENST00000361587 API5Q9BZZ5 524 aaKnown RBP12.96□□□□□ -0.34
HIPK1-202ENST00000361587 EVC2Q86UK5 1308 aa12.96□□□□□ -0.34
HIPK1-202ENST00000361587 COG3Q96JB2 828 aa12.95□□□□□ -0.34
HIPK1-202ENST00000361587 CCDC9Q9Y3X0 531 aaKnown RBP12.95□□□□□ -0.34
HIPK1-202ENST00000361587 NOL10Q9BSC4 688 aaKnown RBP12.94□□□□□ -0.34
HIPK1-202ENST00000361587 PANK3Q9H999 370 aa12.94□□□□□ -0.34
HIPK1-202ENST00000361587 CDR1P51861 262 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms