RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 CNTLNQ9NXG0 1405 aa20.75■□□□□ 0.91
NSMCE1-201ENST00000361439 GCC2Q8IWJ2 1684 aa20.74■□□□□ 0.91
NSMCE1-201ENST00000361439 MLECQ14165 292 aa20.74■□□□□ 0.91
NSMCE1-201ENST00000361439 ESF1Q9H501 851 aaKnown RBP20.73■□□□□ 0.91
NSMCE1-201ENST00000361439 DEPDC5O75140 1603 aa20.72■□□□□ 0.91
NSMCE1-201ENST00000361439 PRDM15P57071 1507 aaPredicted RBP20.72■□□□□ 0.91
NSMCE1-201ENST00000361439 KDM4FA0A1W2PPD8 638 aa20.71■□□□□ 0.91
NSMCE1-201ENST00000361439 KDM5DQ9BY66 1539 aa20.71■□□□□ 0.91
NSMCE1-201ENST00000361439 KANK1Q14678 1352 aa20.71■□□□□ 0.91
NSMCE1-201ENST00000361439 SETD5Q9C0A6 1442 aa20.7■□□□□ 0.9
NSMCE1-201ENST00000361439 HRCP23327 699 aa20.69■□□□□ 0.9
NSMCE1-201ENST00000361439 WASHC2CQ9Y4E1 1318 aa20.69■□□□□ 0.9
NSMCE1-201ENST00000361439 MROH1Q8NDA8 1641 aa20.67■□□□□ 0.9
NSMCE1-201ENST00000361439 UNC13BO14795 1591 aa20.67■□□□□ 0.9
NSMCE1-201ENST00000361439 MADDQ8WXG6 1647 aa20.67■□□□□ 0.9
NSMCE1-201ENST00000361439 VWDEQ8N2E2 1590 aa20.66■□□□□ 0.9
NSMCE1-201ENST00000361439 ZC3H13Q5T200 1668 aaKnown RBP20.66■□□□□ 0.9
NSMCE1-201ENST00000361439 FER1L4A9Z1Z3 1794 aa20.66■□□□□ 0.9
NSMCE1-201ENST00000361439 LMTK2Q8IWU2 1503 aa20.64■□□□□ 0.9
NSMCE1-201ENST00000361439 ABCC3O15438 1527 aa20.63■□□□□ 0.89
NSMCE1-201ENST00000361439 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.63■□□□□ 0.89
NSMCE1-201ENST00000361439 MROH2AA6NES4 1674 aa20.63■□□□□ 0.89
NSMCE1-201ENST00000361439 PTPRMP28827 1452 aa20.62■□□□□ 0.89
NSMCE1-201ENST00000361439 NUP155O75694 1391 aa20.62■□□□□ 0.89
NSMCE1-201ENST00000361439 ZMYM3Q14202 1370 aa20.62■□□□□ 0.89
NSMCE1-201ENST00000361439 RAB3GAP2Q9H2M9 1393 aa20.6■□□□□ 0.89
NSMCE1-201ENST00000361439 ARHGAP31Q2M1Z3 1444 aa20.6■□□□□ 0.89
NSMCE1-201ENST00000361439 RIMS1Q86UR5 1692 aaKnown RBP20.59■□□□□ 0.89
NSMCE1-201ENST00000361439 IQGAP3Q86VI3 1631 aa20.59■□□□□ 0.89
NSMCE1-201ENST00000361439 CLTCQ00610 1675 aaKnown RBP20.58■□□□□ 0.89
NSMCE1-201ENST00000361439 PZPP20742 1482 aa20.56■□□□□ 0.88
NSMCE1-201ENST00000361439 RPRD2Q5VT52 1461 aaKnown RBP20.56■□□□□ 0.88
NSMCE1-201ENST00000361439 NPATQ14207 1427 aa20.55■□□□□ 0.88
NSMCE1-201ENST00000361439 TRIM52Q96A61 297 aa20.55■□□□□ 0.88
NSMCE1-201ENST00000361439 EFCAB6Q5THR3 1501 aa20.53■□□□□ 0.88
NSMCE1-201ENST00000361439 CAMSAP1Q5T5Y3 1602 aa20.53■□□□□ 0.88
NSMCE1-201ENST00000361439 TET3O43151 1660 aa20.53■□□□□ 0.88
NSMCE1-201ENST00000361439 CEP152O94986 1710 aa20.53■□□□□ 0.88
NSMCE1-201ENST00000361439 C3P01024 1663 aa20.52■□□□□ 0.88
NSMCE1-201ENST00000361439 CEBPAP49715 358 aaPredicted RBP20.5■□□□□ 0.87
NSMCE1-201ENST00000361439 SLC4A1APQ9BWU0 796 aaKnown RBP20.49■□□□□ 0.87
NSMCE1-201ENST00000361439 SPATA31D1Q6ZQQ2 1576 aa20.46■□□□□ 0.87
NSMCE1-201ENST00000361439 SETD1BQ9UPS6 1966 aaKnown RBP20.46■□□□□ 0.87
NSMCE1-201ENST00000361439 MPHOSPH9Q99550 1183 aa20.46■□□□□ 0.87
NSMCE1-201ENST00000361439 PCGF6Q9BYE7 350 aa20.46■□□□□ 0.87
NSMCE1-201ENST00000361439 ERVK-7P63135 1459 aa20.45■□□□□ 0.86
NSMCE1-201ENST00000361439 NOS1P29475 1434 aa20.44■□□□□ 0.86
NSMCE1-201ENST00000361439 FBXO31Q5XUX0 539 aaPredicted RBP20.44■□□□□ 0.86
NSMCE1-201ENST00000361439 TNRQ92752 1358 aa20.44■□□□□ 0.86
NSMCE1-201ENST00000361439 PKD2Q13563 968 aa20.43■□□□□ 0.86
NSMCE1-201ENST00000361439 AEBP2Q6ZN18 517 aaPredicted RBP20.43■□□□□ 0.86
NSMCE1-201ENST00000361439 E9PCH4 1651 aa20.42■□□□□ 0.86
NSMCE1-201ENST00000361439 SLC52A1Q9NWF4 448 aa20.41■□□□□ 0.86
NSMCE1-201ENST00000361439 PTPRTO14522 1441 aa20.41■□□□□ 0.86
NSMCE1-201ENST00000361439 NLRP1Q9C000 1473 aa20.41■□□□□ 0.86
NSMCE1-201ENST00000361439 PREX1Q8TCU6 1659 aa20.41■□□□□ 0.86
NSMCE1-201ENST00000361439 PLPPR3Q6T4P5 718 aa20.4■□□□□ 0.86
NSMCE1-201ENST00000361439 UHRF1BP1Q6BDS2 1440 aa20.39■□□□□ 0.85
NSMCE1-201ENST00000361439 A2ML1A8K2U0 1454 aa20.34■□□□□ 0.85
NSMCE1-201ENST00000361439 SYNMO15061 1565 aa20.34■□□□□ 0.85
NSMCE1-201ENST00000361439 TRPM2O94759 1503 aa20.33■□□□□ 0.85
NSMCE1-201ENST00000361439 MYO3AQ8NEV4 1616 aa20.33■□□□□ 0.84
NSMCE1-201ENST00000361439 SPHKAPQ2M3C7 1700 aa20.32■□□□□ 0.84
NSMCE1-201ENST00000361439 CFAP65Q6ZU64 1925 aaKnown RBP20.31■□□□□ 0.84
NSMCE1-201ENST00000361439 PLA2R1Q13018 1463 aa20.31■□□□□ 0.84
NSMCE1-201ENST00000361439 IDI1Q13907 227 aa20.31■□□□□ 0.84
NSMCE1-201ENST00000361439 ZNF142P52746 1687 aaPredicted RBP20.31■□□□□ 0.84
NSMCE1-201ENST00000361439 LMTK3Q96Q04 1460 aa20.3■□□□□ 0.84
NSMCE1-201ENST00000361439 CEP170BQ9Y4F5 1589 aaPredicted RBP20.3■□□□□ 0.84
NSMCE1-201ENST00000361439 PIK3C2BO00750 1634 aa20.3■□□□□ 0.84
NSMCE1-201ENST00000361439 THEMISQ8N1K5 641 aaPredicted RBP20.29■□□□□ 0.84
NSMCE1-201ENST00000361439 KDM5AP29375 1690 aaKnown RBP20.29■□□□□ 0.84
NSMCE1-201ENST00000361439 FOXD1Q16676 465 aa20.28■□□□□ 0.84
NSMCE1-201ENST00000361439 ANKRD30BQ9BXX2 1392 aa20.28■□□□□ 0.84
NSMCE1-201ENST00000361439 UGGT1Q9NYU2 1555 aa20.27■□□□□ 0.84
NSMCE1-201ENST00000361439 CCDC144AA2RUR9 1427 aa20.27■□□□□ 0.83
NSMCE1-201ENST00000361439 DHX57Q6P158 1386 aaKnown RBP20.26■□□□□ 0.83
NSMCE1-201ENST00000361439 STAG3Q9UJ98 1225 aa20.25■□□□□ 0.83
NSMCE1-201ENST00000361439 ADGRB3O60242 1522 aa20.23■□□□□ 0.83
NSMCE1-201ENST00000361439 CLTCL1P53675 1640 aa20.21■□□□□ 0.83
NSMCE1-201ENST00000361439 UBR1Q8IWV7 1749 aa20.21■□□□□ 0.83
NSMCE1-201ENST00000361439 NEURL4Q96JN8 1562 aa20.21■□□□□ 0.83
NSMCE1-201ENST00000361439 HDGFP51858 240 aaKnown RBP20.19■□□□□ 0.82
NSMCE1-201ENST00000361439 TMEM131LA2VDJ0 1609 aa20.19■□□□□ 0.82
NSMCE1-201ENST00000361439 TMEM2Q9UHN6 1383 aa20.19■□□□□ 0.82
NSMCE1-201ENST00000361439 SLIT1O75093 1534 aa20.18■□□□□ 0.82
NSMCE1-201ENST00000361439 CLSPNQ9HAW4 1339 aa20.18■□□□□ 0.82
NSMCE1-201ENST00000361439 ARHGAP23Q9P227 1491 aa20.18■□□□□ 0.82
NSMCE1-201ENST00000361439 CHGAP10645 457 aaKnown RBP20.16■□□□□ 0.82
NSMCE1-201ENST00000361439 ANKLE2Q86XL3 938 aa20.16■□□□□ 0.82
NSMCE1-201ENST00000361439 RPGRIP1LQ68CZ1 1315 aa20.16■□□□□ 0.82
NSMCE1-201ENST00000361439 KIF1BO60333 1816 aa20.16■□□□□ 0.82
NSMCE1-201ENST00000361439 HSPA2P54652 639 aa20.15■□□□□ 0.82
NSMCE1-201ENST00000361439 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.15■□□□□ 0.82
NSMCE1-201ENST00000361439 EID1Q9Y6B2 187 aa20.15■□□□□ 0.82
NSMCE1-201ENST00000361439 SPATA31E1Q6ZUB1 1445 aa20.14■□□□□ 0.81
NSMCE1-201ENST00000361439 ZFYVE9O95405 1425 aa20.11■□□□□ 0.81
NSMCE1-201ENST00000361439 ZNF326Q5BKZ1 582 aaKnown RBP20.11■□□□□ 0.81
NSMCE1-201ENST00000361439 STAC3Q96MF2 364 aa20.11■□□□□ 0.81
NSMCE1-201ENST00000361439 DMRT2Q9Y5R5 561 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms