RNA–Protein interactions for RNA: ENST00000360779.3

SDCBP2-202, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,519 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-202ENST00000360779 COL17A1Q9UMD9 1497 aaPredicted RBP24.3■■□□□ 1.48
SDCBP2-202ENST00000360779 UNC13BO14795 1591 aa24.28■■□□□ 1.48
SDCBP2-202ENST00000360779 EIF2AK4Q9P2K8 1649 aaKnown RBP24.27■■□□□ 1.47
SDCBP2-202ENST00000360779 PZPP20742 1482 aa24.25■■□□□ 1.47
SDCBP2-202ENST00000360779 KANK1Q14678 1352 aa24.24■■□□□ 1.47
SDCBP2-202ENST00000360779 KDM5DQ9BY66 1539 aa24.24■■□□□ 1.47
SDCBP2-202ENST00000360779 ATP10AO60312 1499 aa24.22■■□□□ 1.47
SDCBP2-202ENST00000360779 FAM135AQ9P2D6 1515 aa24.21■■□□□ 1.47
SDCBP2-202ENST00000360779 PKD2Q13563 968 aa24.2■■□□□ 1.47
SDCBP2-202ENST00000360779 FOXD1Q16676 465 aa24.2■■□□□ 1.47
SDCBP2-202ENST00000360779 ARHGEF40Q8TER5 1519 aa24.19■■□□□ 1.46
SDCBP2-202ENST00000360779 NEUROD1Q13562 356 aa24.19■■□□□ 1.46
SDCBP2-202ENST00000360779 GGT6Q6P531 493 aa24.19■■□□□ 1.46
SDCBP2-202ENST00000360779 IQGAP3Q86VI3 1631 aa24.17■■□□□ 1.46
SDCBP2-202ENST00000360779 DEPDC5O75140 1603 aa24.17■■□□□ 1.46
SDCBP2-202ENST00000360779 SIN3AQ96ST3 1273 aa24.15■■□□□ 1.46
SDCBP2-202ENST00000360779 PRDM15P57071 1507 aaPredicted RBP24.13■■□□□ 1.45
SDCBP2-202ENST00000360779 RNF17Q9BXT8 1623 aaKnown RBP24.13■■□□□ 1.45
SDCBP2-202ENST00000360779 REREQ9P2R6 1566 aa24.11■■□□□ 1.45
SDCBP2-202ENST00000360779 BCORL1Q5H9F3 1711 aa24.11■■□□□ 1.45
SDCBP2-202ENST00000360779 MROH1Q8NDA8 1641 aa24.1■■□□□ 1.45
SDCBP2-202ENST00000360779 ARID4BQ4LE39 1312 aaPredicted RBP24.1■■□□□ 1.45
SDCBP2-202ENST00000360779 WASHC2CQ9Y4E1 1318 aa24.07■■□□□ 1.44
SDCBP2-202ENST00000360779 MLECQ14165 292 aa24.06■■□□□ 1.44
SDCBP2-202ENST00000360779 ANKRD30BQ9BXX2 1392 aa24.06■■□□□ 1.44
SDCBP2-202ENST00000360779 VWDEQ8N2E2 1590 aa24.05■■□□□ 1.44
SDCBP2-202ENST00000360779 AGLP35573 1532 aa24.05■■□□□ 1.44
SDCBP2-202ENST00000360779 TET3O43151 1660 aa24.05■■□□□ 1.44
SDCBP2-202ENST00000360779 TONSLQ96HA7 1378 aa24.04■■□□□ 1.44
SDCBP2-202ENST00000360779 CEP152O94986 1710 aa24.04■■□□□ 1.44
SDCBP2-202ENST00000360779 ESF1Q9H501 851 aaKnown RBP24■■□□□ 1.43
SDCBP2-202ENST00000360779 LMTK2Q8IWU2 1503 aa24■■□□□ 1.43
SDCBP2-202ENST00000360779 ABCC3O15438 1527 aa23.99■■□□□ 1.43
SDCBP2-202ENST00000360779 E9PCH4 1651 aa23.99■■□□□ 1.43
SDCBP2-202ENST00000360779 SIGLEC1Q9BZZ2 1709 aa23.98■■□□□ 1.43
SDCBP2-202ENST00000360779 EFCAB6Q5THR3 1501 aa23.98■■□□□ 1.43
SDCBP2-202ENST00000360779 ZC3H13Q5T200 1668 aaKnown RBP23.97■■□□□ 1.43
SDCBP2-202ENST00000360779 CCDC144AA2RUR9 1427 aa23.95■■□□□ 1.42
SDCBP2-202ENST00000360779 TIMELESSQ9UNS1 1208 aa23.94■■□□□ 1.42
SDCBP2-202ENST00000360779 CAMSAP1Q5T5Y3 1602 aa23.94■■□□□ 1.42
SDCBP2-202ENST00000360779 RPRD2Q5VT52 1461 aaKnown RBP23.94■■□□□ 1.42
SDCBP2-202ENST00000360779 PPP6R1Q9UPN7 881 aa23.93■■□□□ 1.42
SDCBP2-202ENST00000360779 SPHKAPQ2M3C7 1700 aa23.9■■□□□ 1.42
SDCBP2-202ENST00000360779 CLTCQ00610 1675 aaKnown RBP23.88■■□□□ 1.41
SDCBP2-202ENST00000360779 TRPM2O94759 1503 aa23.88■■□□□ 1.41
SDCBP2-202ENST00000360779 PLA2R1Q13018 1463 aa23.88■■□□□ 1.41
SDCBP2-202ENST00000360779 NPATQ14207 1427 aa23.88■■□□□ 1.41
SDCBP2-202ENST00000360779 PTPRTO14522 1441 aa23.85■■□□□ 1.41
SDCBP2-202ENST00000360779 ARHGAP31Q2M1Z3 1444 aa23.83■■□□□ 1.41
SDCBP2-202ENST00000360779 L3MBTL2Q969R5 705 aa23.83■■□□□ 1.41
SDCBP2-202ENST00000360779 CNTLNQ9NXG0 1405 aa23.81■■□□□ 1.4
SDCBP2-202ENST00000360779 RGL3Q3MIN7 710 aa23.8■■□□□ 1.4
SDCBP2-202ENST00000360779 PPP1R15AO75807 674 aaPredicted RBP23.79■■□□□ 1.4
SDCBP2-202ENST00000360779 CLTCL1P53675 1640 aa23.79■■□□□ 1.4
SDCBP2-202ENST00000360779 CHGAP10645 457 aaKnown RBP23.78■■□□□ 1.4
SDCBP2-202ENST00000360779 CFAP65Q6ZU64 1925 aaKnown RBP23.77■■□□□ 1.4
SDCBP2-202ENST00000360779 UGGT1Q9NYU2 1555 aa23.77■■□□□ 1.4
SDCBP2-202ENST00000360779 ZMYM3Q14202 1370 aa23.75■■□□□ 1.39
SDCBP2-202ENST00000360779 PREX1Q8TCU6 1659 aa23.75■■□□□ 1.39
SDCBP2-202ENST00000360779 ZNF326Q5BKZ1 582 aaKnown RBP23.74■■□□□ 1.39
SDCBP2-202ENST00000360779 FBXO31Q5XUX0 539 aaPredicted RBP23.74■■□□□ 1.39
SDCBP2-202ENST00000360779 PLPPR3Q6T4P5 718 aa23.74■■□□□ 1.39
SDCBP2-202ENST00000360779 NOS1P29475 1434 aa23.74■■□□□ 1.39
SDCBP2-202ENST00000360779 KDM2AQ9Y2K7 1162 aa23.74■■□□□ 1.39
SDCBP2-202ENST00000360779 FER1L4A9Z1Z3 1794 aa23.73■■□□□ 1.39
SDCBP2-202ENST00000360779 ERVK-7P63135 1459 aa23.73■■□□□ 1.39
SDCBP2-202ENST00000360779 DCAF11Q8TEB1 546 aa23.73■■□□□ 1.39
SDCBP2-202ENST00000360779 SYNMO15061 1565 aa23.71■■□□□ 1.39
SDCBP2-202ENST00000360779 MROH2AA6NES4 1674 aa23.7■■□□□ 1.38
SDCBP2-202ENST00000360779 KIF1BO60333 1816 aa23.7■■□□□ 1.38
SDCBP2-202ENST00000360779 SLC52A1Q9NWF4 448 aa23.69■■□□□ 1.38
SDCBP2-202ENST00000360779 SPATA31E1Q6ZUB1 1445 aa23.68■■□□□ 1.38
SDCBP2-202ENST00000360779 STAG3Q9UJ98 1225 aa23.67■■□□□ 1.38
SDCBP2-202ENST00000360779 SPATA31D1Q6ZQQ2 1576 aa23.65■■□□□ 1.38
SDCBP2-202ENST00000360779 MADDQ8WXG6 1647 aa23.65■■□□□ 1.38
SDCBP2-202ENST00000360779 IDI1Q13907 227 aa23.64■■□□□ 1.38
SDCBP2-202ENST00000360779 CEBPAP49715 358 aaPredicted RBP23.64■■□□□ 1.37
SDCBP2-202ENST00000360779 PIK3C2BO00750 1634 aa23.64■■□□□ 1.37
SDCBP2-202ENST00000360779 RIMS1Q86UR5 1692 aaKnown RBP23.63■■□□□ 1.37
SDCBP2-202ENST00000360779 TNRQ92752 1358 aa23.62■■□□□ 1.37
SDCBP2-202ENST00000360779 ADGRB3O60242 1522 aa23.62■■□□□ 1.37
SDCBP2-202ENST00000360779 NBPF8Q3BBV2 869 aa23.61■■□□□ 1.37
SDCBP2-202ENST00000360779 C3P01024 1663 aa23.6■■□□□ 1.37
SDCBP2-202ENST00000360779 NEURL4Q96JN8 1562 aa23.6■■□□□ 1.37
SDCBP2-202ENST00000360779 ADAMTSL3P82987 1691 aa23.58■■□□□ 1.37
SDCBP2-202ENST00000360779 UHRF1BP1Q6BDS2 1440 aa23.56■■□□□ 1.36
SDCBP2-202ENST00000360779 STAC3Q96MF2 364 aa23.54■■□□□ 1.36
SDCBP2-202ENST00000360779 PRAG1Q86YV5 1406 aa23.54■■□□□ 1.36
SDCBP2-202ENST00000360779 RPGRIP1LQ68CZ1 1315 aa23.54■■□□□ 1.36
SDCBP2-202ENST00000360779 ZNF316A6NFI3 1004 aaPredicted RBP23.53■■□□□ 1.36
SDCBP2-202ENST00000360779 TMEM131LA2VDJ0 1609 aa23.52■■□□□ 1.36
SDCBP2-202ENST00000360779 MYOM2P54296 1465 aa23.5■■□□□ 1.35
SDCBP2-202ENST00000360779 NUTM2DQ5VT03 806 aaPredicted RBP23.49■■□□□ 1.35
SDCBP2-202ENST00000360779 ROCK2O75116 1388 aaKnown RBP23.49■■□□□ 1.35
SDCBP2-202ENST00000360779 RALGAPBQ86X10 1494 aa23.49■■□□□ 1.35
SDCBP2-202ENST00000360779 IFT172Q9UG01 1749 aa23.48■■□□□ 1.35
SDCBP2-202ENST00000360779 NLRP1Q9C000 1473 aa23.48■■□□□ 1.35
SDCBP2-202ENST00000360779 MYO5BQ9ULV0 1848 aa23.48■■□□□ 1.35
SDCBP2-202ENST00000360779 PPLO60437 1756 aa23.47■■□□□ 1.35
SDCBP2-202ENST00000360779 CARD11Q9BXL7 1154 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms