RNA–Protein interactions for RNA: ENST00000360752.4

RDH16-201, Transcript of retinol dehydrogenase 16, humanhuman

TSL 1 (best)

Gene RDH16, Length 3,198 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH16-201ENST00000360752 C20orf194Q5TEA3 1177 aa12.84□□□□□ -0.35
RDH16-201ENST00000360752 DAXXQ9UER7 740 aaPredicted RBP12.84□□□□□ -0.35
RDH16-201ENST00000360752 TROQ12816 1431 aaPredicted RBP12.84□□□□□ -0.35
RDH16-201ENST00000360752 PBRM1Q86U86 1689 aa12.84□□□□□ -0.35
RDH16-201ENST00000360752 PANK3Q9H999 370 aa12.84□□□□□ -0.35
RDH16-201ENST00000360752 ADAMTS12P58397 1594 aa12.84□□□□□ -0.35
RDH16-201ENST00000360752 DISP1Q96F81 1524 aa12.83□□□□□ -0.36
RDH16-201ENST00000360752 GPATCH8Q9UKJ3 1502 aaKnown RBP12.83□□□□□ -0.36
RDH16-201ENST00000360752 RGS3P49796 1198 aa12.83□□□□□ -0.36
RDH16-201ENST00000360752 KIF14Q15058 1648 aa12.82□□□□□ -0.36
RDH16-201ENST00000360752 TCERG1O14776 1098 aaKnown RBP12.82□□□□□ -0.36
RDH16-201ENST00000360752 BRD4O60885 1362 aaPredicted RBP12.82□□□□□ -0.36
RDH16-201ENST00000360752 JPH4Q96JJ6 628 aa12.81□□□□□ -0.36
RDH16-201ENST00000360752 C9orf84Q5VXU9 1444 aa12.81□□□□□ -0.36
RDH16-201ENST00000360752 KDM5CP41229 1560 aa12.81□□□□□ -0.36
RDH16-201ENST00000360752 KIAA0556O60303 1618 aa12.8□□□□□ -0.36
RDH16-201ENST00000360752 RAPGEF6Q8TEU7 1601 aa12.8□□□□□ -0.36
RDH16-201ENST00000360752 BACH2Q9BYV9 841 aa12.8□□□□□ -0.36
RDH16-201ENST00000360752 MBD5Q9P267 1494 aa12.8□□□□□ -0.36
RDH16-201ENST00000360752 KIAA0586Q9BVV6 1533 aa12.79□□□□□ -0.36
RDH16-201ENST00000360752 CCDC146Q8IYE0 955 aa12.79□□□□□ -0.36
RDH16-201ENST00000360752 ARID4BQ4LE39 1312 aaPredicted RBP12.78□□□□□ -0.36
RDH16-201ENST00000360752 WDR43Q15061 677 aaKnown RBP eCLIP12.78□□□□□ -0.36
RDH16-201ENST00000360752 ADAMTS8Q9UP79 889 aa12.78□□□□□ -0.36
RDH16-201ENST00000360752 LRPPRCP42704 1394 aaKnown RBP12.78□□□□□ -0.36
RDH16-201ENST00000360752 RALGAPBQ86X10 1494 aa12.77□□□□□ -0.37
RDH16-201ENST00000360752 CCDC144AA2RUR9 1427 aa12.77□□□□□ -0.37
RDH16-201ENST00000360752 DISP3Q9P2K9 1392 aa12.76□□□□□ -0.37
RDH16-201ENST00000360752 GRIN2AQ12879 1464 aa12.75□□□□□ -0.37
RDH16-201ENST00000360752 POLR1AO95602 1720 aaPredicted RBP12.75□□□□□ -0.37
RDH16-201ENST00000360752 MRC2Q9UBG0 1479 aa12.75□□□□□ -0.37
RDH16-201ENST00000360752 TMF1P82094 1093 aa12.73□□□□□ -0.37
RDH16-201ENST00000360752 KNSTRNQ9Y448 316 aa12.73□□□□□ -0.37
RDH16-201ENST00000360752 PDE3BQ13370 1112 aa12.73□□□□□ -0.37
RDH16-201ENST00000360752 PER1O15534 1290 aaPredicted RBP12.73□□□□□ -0.37
RDH16-201ENST00000360752 VSIG10Q8N0Z9 540 aa12.73□□□□□ -0.37
RDH16-201ENST00000360752 CARMIL2Q6F5E8 1435 aa12.72□□□□□ -0.37
RDH16-201ENST00000360752 FRAT1Q92837 279 aaPredicted RBP12.72□□□□□ -0.37
RDH16-201ENST00000360752 ARXQ96QS3 562 aa12.72□□□□□ -0.37
RDH16-201ENST00000360752 GSE1Q14687 1217 aa12.71□□□□□ -0.37
RDH16-201ENST00000360752 NEUROD2Q15784 382 aa12.71□□□□□ -0.37
RDH16-201ENST00000360752 SENP3Q9H4L4 574 aaPredicted RBP12.71□□□□□ -0.37
RDH16-201ENST00000360752 PARD3Q8TEW0 1356 aa12.71□□□□□ -0.37
RDH16-201ENST00000360752 PPM1GO15355 546 aaPredicted RBP12.7□□□□□ -0.38
RDH16-201ENST00000360752 TNNT2P45379 298 aaPredicted RBP12.7□□□□□ -0.38
RDH16-201ENST00000360752 CANXP27824 592 aaKnown RBP12.7□□□□□ -0.38
RDH16-201ENST00000360752 ERCC6Q03468 1493 aa12.7□□□□□ -0.38
RDH16-201ENST00000360752 UHRF1BP1Q6BDS2 1440 aa12.7□□□□□ -0.38
RDH16-201ENST00000360752 WASHC2CQ9Y4E1 1318 aa12.69□□□□□ -0.38
RDH16-201ENST00000360752 PLEKHG5O94827 1062 aa12.69□□□□□ -0.38
RDH16-201ENST00000360752 ADGBQ8N7X0 1667 aa12.69□□□□□ -0.38
RDH16-201ENST00000360752 ITSN2Q9NZM3 1697 aa12.69□□□□□ -0.38
RDH16-201ENST00000360752 MS4A1P11836 297 aa12.69□□□□□ -0.38
RDH16-201ENST00000360752 TESK2Q96S53 571 aa12.69□□□□□ -0.38
RDH16-201ENST00000360752 IFT140Q96RY7 1462 aa12.68□□□□□ -0.38
RDH16-201ENST00000360752 NFKBIBQ15653 356 aa12.68□□□□□ -0.38
RDH16-201ENST00000360752 ADGRL2O95490 1459 aa12.68□□□□□ -0.38
RDH16-201ENST00000360752 DDRGK1Q96HY6 314 aa12.68□□□□□ -0.38
RDH16-201ENST00000360752 MAGI1Q96QZ7 1491 aaPredicted RBP12.68□□□□□ -0.38
RDH16-201ENST00000360752 PRAG1Q86YV5 1406 aa12.67□□□□□ -0.38
RDH16-201ENST00000360752 BCAR3O75815 825 aa12.67□□□□□ -0.38
RDH16-201ENST00000360752 APAF1O14727 1248 aa12.66□□□□□ -0.38
RDH16-201ENST00000360752 ERBINQ96RT1 1412 aa12.66□□□□□ -0.38
RDH16-201ENST00000360752 PPP2R1AP30153 589 aa12.66□□□□□ -0.38
RDH16-201ENST00000360752 GOLGA2Q08379 1002 aa12.66□□□□□ -0.38
RDH16-201ENST00000360752 ZMYND15Q9H091 742 aa12.66□□□□□ -0.38
RDH16-201ENST00000360752 USP35Q9P2H5 1018 aa12.66□□□□□ -0.38
RDH16-201ENST00000360752 PLEKHH1Q9ULM0 1364 aa12.65□□□□□ -0.38
RDH16-201ENST00000360752 ATP10BO94823 1461 aa12.65□□□□□ -0.38
RDH16-201ENST00000360752 EIF4G3O43432 1585 aaKnown RBP12.65□□□□□ -0.39
RDH16-201ENST00000360752 FAM135AQ9P2D6 1515 aa12.64□□□□□ -0.39
RDH16-201ENST00000360752 FRAT2O75474 233 aaPredicted RBP12.64□□□□□ -0.39
RDH16-201ENST00000360752 SPINK5Q9NQ38 1064 aaPredicted RBP12.64□□□□□ -0.39
RDH16-201ENST00000360752 ARHGEF12Q9NZN5 1544 aa12.63□□□□□ -0.39
RDH16-201ENST00000360752 DUSP27Q5VZP5 1158 aa12.63□□□□□ -0.39
RDH16-201ENST00000360752 RRP7AQ9Y3A4 280 aaKnown RBP12.63□□□□□ -0.39
RDH16-201ENST00000360752 CEP170Q5SW79 1584 aa12.63□□□□□ -0.39
RDH16-201ENST00000360752 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.63□□□□□ -0.39
RDH16-201ENST00000360752 SLKQ9H2G2 1235 aaPredicted RBP12.63□□□□□ -0.39
RDH16-201ENST00000360752 RSPH6AQ9H0K4 717 aa12.63□□□□□ -0.39
RDH16-201ENST00000360752 FAM161AQ3B820 660 aa12.62□□□□□ -0.39
RDH16-201ENST00000360752 CENPQQ7L2Z9 268 aaPredicted RBP12.62□□□□□ -0.39
RDH16-201ENST00000360752 BCL2L13Q9BXK5 485 aa12.62□□□□□ -0.39
RDH16-201ENST00000360752 A2MP01023 1474 aa12.62□□□□□ -0.39
RDH16-201ENST00000360752 SPRYD3Q8NCJ5 442 aa12.61□□□□□ -0.39
RDH16-201ENST00000360752 CROCC2H7BZ55 1655 aa12.61□□□□□ -0.39
RDH16-201ENST00000360752 PLEKHH2Q8IVE3 1493 aa12.61□□□□□ -0.39
RDH16-201ENST00000360752 CHGAP10645 457 aaKnown RBP12.61□□□□□ -0.39
RDH16-201ENST00000360752 CDC42BPAQ5VT25 1732 aa12.61□□□□□ -0.39
RDH16-201ENST00000360752 PTPRGP23470 1445 aa12.6□□□□□ -0.39
RDH16-201ENST00000360752 PANK1Q8TE04 598 aa12.6□□□□□ -0.39
RDH16-201ENST00000360752 COG6Q9Y2V7 657 aa12.6□□□□□ -0.39
RDH16-201ENST00000360752 KDM5DQ9BY66 1539 aa12.6□□□□□ -0.39
RDH16-201ENST00000360752 C8orf34Q49A92 452 aa12.6□□□□□ -0.39
RDH16-201ENST00000360752 DMRT2Q9Y5R5 561 aa12.6□□□□□ -0.39
RDH16-201ENST00000360752 COL17A1Q9UMD9 1497 aaPredicted RBP12.6□□□□□ -0.39
RDH16-201ENST00000360752 CCDC141Q6ZP82 1450 aa12.59□□□□□ -0.39
RDH16-201ENST00000360752 ARHGAP5Q13017 1502 aa12.59□□□□□ -0.39
RDH16-201ENST00000360752 GLIPR1L2Q4G1C9 344 aa12.59□□□□□ -0.39
RDH16-201ENST00000360752 CLUAP1Q96AJ1 413 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms