RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 KIAA0586Q9BVV6 1533 aa6.25□□□□□ -1.41
PTPN22-201ENST00000359785 BRD4O60885 1362 aaPredicted RBP6.25□□□□□ -1.41
PTPN22-201ENST00000359785 KIAA1107Q9UPP5 1409 aa6.24□□□□□ -1.41
PTPN22-201ENST00000359785 ABCA9Q8IUA7 1624 aa6.24□□□□□ -1.41
PTPN22-201ENST00000359785 FAM135AQ9P2D6 1515 aa6.24□□□□□ -1.41
PTPN22-201ENST00000359785 PARD3Q8TEW0 1356 aa6.23□□□□□ -1.41
PTPN22-201ENST00000359785 FOXD1Q16676 465 aa6.23□□□□□ -1.41
PTPN22-201ENST00000359785 CDC42BPGQ6DT37 1551 aa6.23□□□□□ -1.41
PTPN22-201ENST00000359785 GRIN2AQ12879 1464 aa6.23□□□□□ -1.41
PTPN22-201ENST00000359785 IBTKQ9P2D0 1353 aaPredicted RBP6.23□□□□□ -1.41
PTPN22-201ENST00000359785 CHD1O14646 1710 aa6.22□□□□□ -1.41
PTPN22-201ENST00000359785 NINLQ9Y2I6 1382 aa6.22□□□□□ -1.41
PTPN22-201ENST00000359785 ADGRL1O94910 1474 aa6.22□□□□□ -1.41
PTPN22-201ENST00000359785 KDM5AP29375 1690 aaKnown RBP6.22□□□□□ -1.41
PTPN22-201ENST00000359785 TET3O43151 1660 aa6.22□□□□□ -1.41
PTPN22-201ENST00000359785 CENPJQ9HC77 1338 aaPredicted RBP6.21□□□□□ -1.41
PTPN22-201ENST00000359785 ABCC5O15440 1437 aa6.21□□□□□ -1.42
PTPN22-201ENST00000359785 NUP153P49790 1475 aaKnown RBP6.21□□□□□ -1.42
PTPN22-201ENST00000359785 NRXN1Q9ULB1 1477 aa6.21□□□□□ -1.42
PTPN22-201ENST00000359785 EIF3AQ14152 1382 aaKnown RBP6.21□□□□□ -1.42
PTPN22-201ENST00000359785 FRMPD1Q5SYB0 1578 aa6.2□□□□□ -1.42
PTPN22-201ENST00000359785 MTUS2Q5JR59 1369 aa6.2□□□□□ -1.42
PTPN22-201ENST00000359785 TRPM2O94759 1503 aa6.2□□□□□ -1.42
PTPN22-201ENST00000359785 PIK3C2BO00750 1634 aa6.2□□□□□ -1.42
PTPN22-201ENST00000359785 ITSN1Q15811 1721 aa6.19□□□□□ -1.42
PTPN22-201ENST00000359785 RAD54L2Q9Y4B4 1467 aa6.19□□□□□ -1.42
PTPN22-201ENST00000359785 PDE3BQ13370 1112 aa6.19□□□□□ -1.42
PTPN22-201ENST00000359785 LMTK2Q8IWU2 1503 aa6.18□□□□□ -1.42
PTPN22-201ENST00000359785 IPO9Q96P70 1041 aaKnown RBP6.18□□□□□ -1.42
PTPN22-201ENST00000359785 ZCCHC11Q5TAX3 1644 aaKnown RBP6.18□□□□□ -1.42
PTPN22-201ENST00000359785 IQSEC2Q5JU85 1478 aa6.18□□□□□ -1.42
PTPN22-201ENST00000359785 PIK3C2GO75747 1445 aa6.18□□□□□ -1.42
PTPN22-201ENST00000359785 ANP32CO43423 234 aa6.18□□□□□ -1.42
PTPN22-201ENST00000359785 NOP58Q9Y2X3 529 aaKnown RBP6.18□□□□□ -1.42
PTPN22-201ENST00000359785 SAMD9LQ8IVG5 1584 aa6.18□□□□□ -1.42
PTPN22-201ENST00000359785 LRRC7Q96NW7 1537 aa6.18□□□□□ -1.42
PTPN22-201ENST00000359785 MYOM2P54296 1465 aa6.17□□□□□ -1.42
PTPN22-201ENST00000359785 NCOA3Q9Y6Q9 1424 aa6.17□□□□□ -1.42
PTPN22-201ENST00000359785 UBTFP17480 764 aaKnown RBP6.17□□□□□ -1.42
PTPN22-201ENST00000359785 KANK1Q14678 1352 aa6.17□□□□□ -1.42
PTPN22-201ENST00000359785 KLHL34Q8N239 644 aa6.17□□□□□ -1.42
PTPN22-201ENST00000359785 PRKRIP1Q9H875 184 aaPredicted RBP6.17□□□□□ -1.42
PTPN22-201ENST00000359785 TONSLQ96HA7 1378 aa6.16□□□□□ -1.42
PTPN22-201ENST00000359785 TCERG1O14776 1098 aaKnown RBP6.16□□□□□ -1.42
PTPN22-201ENST00000359785 CDK11AQ9UQ88 783 aaPredicted RBP6.16□□□□□ -1.42
PTPN22-201ENST00000359785 MAP3K4Q9Y6R4 1608 aa6.16□□□□□ -1.42
PTPN22-201ENST00000359785 USP54Q70EL1 1684 aa6.16□□□□□ -1.42
PTPN22-201ENST00000359785 PPLO60437 1756 aa6.16□□□□□ -1.42
PTPN22-201ENST00000359785 KDM2BQ8NHM5 1336 aa6.16□□□□□ -1.42
PTPN22-201ENST00000359785 TROQ12816 1431 aaPredicted RBP6.16□□□□□ -1.42
PTPN22-201ENST00000359785 SCAF11Q99590 1463 aaKnown RBP6.15□□□□□ -1.42
PTPN22-201ENST00000359785 FKBP8Q14318 412 aa6.15□□□□□ -1.42
PTPN22-201ENST00000359785 NUDCQ9Y266 331 aa6.15□□□□□ -1.42
PTPN22-201ENST00000359785 KIF15Q9NS87 1388 aa6.15□□□□□ -1.43
PTPN22-201ENST00000359785 GPATCH8Q9UKJ3 1502 aaKnown RBP6.15□□□□□ -1.43
PTPN22-201ENST00000359785 AAMPQ13685 434 aa6.14□□□□□ -1.43
PTPN22-201ENST00000359785 PRAG1Q86YV5 1406 aa6.14□□□□□ -1.43
PTPN22-201ENST00000359785 ANKRD30AQ9BXX3 1397 aa6.14□□□□□ -1.43
PTPN22-201ENST00000359785 SYCP2Q9BX26 1530 aa6.14□□□□□ -1.43
PTPN22-201ENST00000359785 ADGRB1O14514 1584 aa6.14□□□□□ -1.43
PTPN22-201ENST00000359785 DEKP35659 375 aaKnown RBP6.13□□□□□ -1.43
PTPN22-201ENST00000359785 FAM43AQ8N2R8 423 aa6.13□□□□□ -1.43
PTPN22-201ENST00000359785 ERBINQ96RT1 1412 aa6.13□□□□□ -1.43
PTPN22-201ENST00000359785 NGEFQ8N5V2 710 aa6.13□□□□□ -1.43
PTPN22-201ENST00000359785 ISY1Q9ULR0 285 aaKnown RBP6.13□□□□□ -1.43
PTPN22-201ENST00000359785 TMEM131LA2VDJ0 1609 aa6.12□□□□□ -1.43
PTPN22-201ENST00000359785 PLPPR3Q6T4P5 718 aa6.12□□□□□ -1.43
PTPN22-201ENST00000359785 ZNF521Q96K83 1311 aa6.12□□□□□ -1.43
PTPN22-201ENST00000359785 CFAP74Q9C0B2 1584 aa6.12□□□□□ -1.43
PTPN22-201ENST00000359785 PPM1GO15355 546 aaPredicted RBP6.12□□□□□ -1.43
PTPN22-201ENST00000359785 UGGT1Q9NYU2 1555 aa6.12□□□□□ -1.43
PTPN22-201ENST00000359785 RIMS1Q86UR5 1692 aaKnown RBP6.12□□□□□ -1.43
PTPN22-201ENST00000359785 SBNO2Q9Y2G9 1366 aa6.12□□□□□ -1.43
PTPN22-201ENST00000359785 RTEL1-TNFRSF6BF6WH68 1400 aa6.12□□□□□ -1.43
PTPN22-201ENST00000359785 CRYBG1Q9Y4K1 1723 aa6.11□□□□□ -1.43
PTPN22-201ENST00000359785 TERF1P54274 439 aa6.11□□□□□ -1.43
PTPN22-201ENST00000359785 PTPRTO14522 1441 aa6.11□□□□□ -1.43
PTPN22-201ENST00000359785 KIF1BO60333 1816 aa6.11□□□□□ -1.43
PTPN22-201ENST00000359785 ASXL2Q76L83 1435 aa6.11□□□□□ -1.43
PTPN22-201ENST00000359785 FANCAO15360 1455 aa6.11□□□□□ -1.43
PTPN22-201ENST00000359785 RSPH6AQ9H0K4 717 aa6.1□□□□□ -1.43
PTPN22-201ENST00000359785 DNAJC5BQ9UF47 199 aa6.1□□□□□ -1.43
PTPN22-201ENST00000359785 MED14O60244 1454 aa6.1□□□□□ -1.43
PTPN22-201ENST00000359785 CARMIL2Q6F5E8 1435 aa6.1□□□□□ -1.43
PTPN22-201ENST00000359785 TRMT2AQ8IZ69 625 aaKnown RBP6.1□□□□□ -1.43
PTPN22-201ENST00000359785 BACH2Q9BYV9 841 aa6.1□□□□□ -1.43
PTPN22-201ENST00000359785 QRICH2Q9H0J4 1663 aa6.1□□□□□ -1.43
PTPN22-201ENST00000359785 DIP2AQ14689 1571 aa6.09□□□□□ -1.43
PTPN22-201ENST00000359785 ABCC1P33527 1531 aa6.09□□□□□ -1.43
PTPN22-201ENST00000359785 ZNF518AQ6AHZ1 1483 aa6.09□□□□□ -1.43
PTPN22-201ENST00000359785 HNRNPUL2Q1KMD3 747 aaKnown RBP6.09□□□□□ -1.43
PTPN22-201ENST00000359785 KCNH8Q96L42 1107 aa6.09□□□□□ -1.43
PTPN22-201ENST00000359785 KIF7Q2M1P5 1343 aa6.09□□□□□ -1.43
PTPN22-201ENST00000359785 DDRGK1Q96HY6 314 aa6.09□□□□□ -1.43
PTPN22-201ENST00000359785 KIF20BQ96Q89 1820 aa6.09□□□□□ -1.44
PTPN22-201ENST00000359785 RALBP1Q15311 655 aa6.09□□□□□ -1.44
PTPN22-201ENST00000359785 STAC3Q96MF2 364 aa6.09□□□□□ -1.44
PTPN22-201ENST00000359785 ARHGEF28Q8N1W1 1705 aaKnown RBP6.08□□□□□ -1.44
PTPN22-201ENST00000359785 CHD2O14647 1828 aaKnown RBP6.08□□□□□ -1.44
PTPN22-201ENST00000359785 COL22A1Q8NFW1 1626 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms