RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 ZNF777Q9ULD5 760 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC2-201ENST00000359680 E9PCH4 1651 aa13.14□□□□□ -0.31
TRAPPC2-201ENST00000359680 CROCC2H7BZ55 1655 aa13.14□□□□□ -0.31
TRAPPC2-201ENST00000359680 KDM2AQ9Y2K7 1162 aa13.13□□□□□ -0.31
TRAPPC2-201ENST00000359680 KIAA0556O60303 1618 aa13.13□□□□□ -0.31
TRAPPC2-201ENST00000359680 ANKRD50Q9ULJ7 1429 aa13.12□□□□□ -0.31
TRAPPC2-201ENST00000359680 TROQ12816 1431 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC2-201ENST00000359680 WASHC2CQ9Y4E1 1318 aa13.12□□□□□ -0.31
TRAPPC2-201ENST00000359680 PPP6R1Q9UPN7 881 aa13.12□□□□□ -0.31
TRAPPC2-201ENST00000359680 PRG4Q92954 1404 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC2-201ENST00000359680 NUP155O75694 1391 aa13.11□□□□□ -0.31
TRAPPC2-201ENST00000359680 PARD3Q8TEW0 1356 aa13.1□□□□□ -0.31
TRAPPC2-201ENST00000359680 DCAF11Q8TEB1 546 aa13.1□□□□□ -0.31
TRAPPC2-201ENST00000359680 CDCA7LQ96GN5 454 aa13.1□□□□□ -0.31
TRAPPC2-201ENST00000359680 DISP1Q96F81 1524 aa13.09□□□□□ -0.31
TRAPPC2-201ENST00000359680 KIAA0586Q9BVV6 1533 aa13.09□□□□□ -0.31
TRAPPC2-201ENST00000359680 GPATCH8Q9UKJ3 1502 aaKnown RBP13.09□□□□□ -0.31
TRAPPC2-201ENST00000359680 PLIN1O60240 522 aa13.09□□□□□ -0.31
TRAPPC2-201ENST00000359680 DAXXQ9UER7 740 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC2-201ENST00000359680 CRBNQ96SW2 442 aa13.08□□□□□ -0.32
TRAPPC2-201ENST00000359680 GSE1Q14687 1217 aa13.06□□□□□ -0.32
TRAPPC2-201ENST00000359680 ADCY10Q96PN6 1610 aa13.05□□□□□ -0.32
TRAPPC2-201ENST00000359680 CEP170Q5SW79 1584 aa13.05□□□□□ -0.32
TRAPPC2-201ENST00000359680 SKAP1Q86WV1 359 aa13.04□□□□□ -0.32
TRAPPC2-201ENST00000359680 NFKBIBQ15653 356 aa13.04□□□□□ -0.32
TRAPPC2-201ENST00000359680 INSRP06213 1382 aa13.04□□□□□ -0.32
TRAPPC2-201ENST00000359680 PLEKHH2Q8IVE3 1493 aa13.04□□□□□ -0.32
TRAPPC2-201ENST00000359680 KDM5DQ9BY66 1539 aa13.03□□□□□ -0.32
TRAPPC2-201ENST00000359680 BLMP54132 1417 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC2-201ENST00000359680 C9orf84Q5VXU9 1444 aa13.03□□□□□ -0.32
TRAPPC2-201ENST00000359680 CC2D1BQ5T0F9 858 aaKnown RBP13.03□□□□□ -0.32
TRAPPC2-201ENST00000359680 ZMYM4Q5VZL5 1548 aa13.03□□□□□ -0.32
TRAPPC2-201ENST00000359680 SHANK2Q9UPX8 1470 aa13.02□□□□□ -0.32
TRAPPC2-201ENST00000359680 PER1O15534 1290 aaPredicted RBP13.02□□□□□ -0.32
TRAPPC2-201ENST00000359680 TSPY4P0CV99 314 aa13.01□□□□□ -0.33
TRAPPC2-201ENST00000359680 TSPY10P0CW01 314 aa13.01□□□□□ -0.33
TRAPPC2-201ENST00000359680 BRPF3Q9ULD4 1205 aa13.01□□□□□ -0.33
TRAPPC2-201ENST00000359680 CENPQQ7L2Z9 268 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC2-201ENST00000359680 TRPM1Q7Z4N2 1603 aa13.01□□□□□ -0.33
TRAPPC2-201ENST00000359680 CDC42BPAQ5VT25 1732 aa13.01□□□□□ -0.33
TRAPPC2-201ENST00000359680 SLC4A3P48751 1232 aa13□□□□□ -0.33
TRAPPC2-201ENST00000359680 ZBTB4Q9P1Z0 1013 aaPredicted RBP13□□□□□ -0.33
TRAPPC2-201ENST00000359680 PLB1Q6P1J6 1458 aa12.99□□□□□ -0.33
TRAPPC2-201ENST00000359680 PRAG1Q86YV5 1406 aa12.99□□□□□ -0.33
TRAPPC2-201ENST00000359680 KDM2BQ8NHM5 1336 aa12.99□□□□□ -0.33
TRAPPC2-201ENST00000359680 FAM161AQ3B820 660 aa12.99□□□□□ -0.33
TRAPPC2-201ENST00000359680 COL17A1Q9UMD9 1497 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC2-201ENST00000359680 C20orf194Q5TEA3 1177 aa12.98□□□□□ -0.33
TRAPPC2-201ENST00000359680 FRAT1Q92837 279 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC2-201ENST00000359680 PTPRGP23470 1445 aa12.98□□□□□ -0.33
TRAPPC2-201ENST00000359680 PANK3Q9H999 370 aa12.97□□□□□ -0.33
TRAPPC2-201ENST00000359680 GRIN2AQ12879 1464 aa12.97□□□□□ -0.33
TRAPPC2-201ENST00000359680 CCDC144AA2RUR9 1427 aa12.97□□□□□ -0.33
TRAPPC2-201ENST00000359680 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC2-201ENST00000359680 ZNF608Q9ULD9 1512 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC2-201ENST00000359680 NBPF1Q3BBV0 1214 aa12.96□□□□□ -0.33
TRAPPC2-201ENST00000359680 RGL3Q3MIN7 710 aa12.96□□□□□ -0.33
TRAPPC2-201ENST00000359680 PLEKHD1A6NEE1 506 aa12.96□□□□□ -0.34
TRAPPC2-201ENST00000359680 DISP3Q9P2K9 1392 aa12.96□□□□□ -0.34
TRAPPC2-201ENST00000359680 MRC2Q9UBG0 1479 aa12.95□□□□□ -0.34
TRAPPC2-201ENST00000359680 EIF4G3O43432 1585 aaKnown RBP12.95□□□□□ -0.34
TRAPPC2-201ENST00000359680 C8orf34Q49A92 452 aa12.95□□□□□ -0.34
TRAPPC2-201ENST00000359680 FAM135AQ9P2D6 1515 aa12.94□□□□□ -0.34
TRAPPC2-201ENST00000359680 GPRASP1Q5JY77 1395 aa12.94□□□□□ -0.34
TRAPPC2-201ENST00000359680 TMF1P82094 1093 aa12.94□□□□□ -0.34
TRAPPC2-201ENST00000359680 ADAMTS8Q9UP79 889 aa12.94□□□□□ -0.34
TRAPPC2-201ENST00000359680 IFT140Q96RY7 1462 aa12.94□□□□□ -0.34
TRAPPC2-201ENST00000359680 WDR43Q15061 677 aaKnown RBP eCLIP12.94□□□□□ -0.34
TRAPPC2-201ENST00000359680 LAMC1P11047 1609 aa12.94□□□□□ -0.34
TRAPPC2-201ENST00000359680 ERBINQ96RT1 1412 aa12.94□□□□□ -0.34
TRAPPC2-201ENST00000359680 PRDM15P57071 1507 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC2-201ENST00000359680 TESK2Q96S53 571 aa12.93□□□□□ -0.34
TRAPPC2-201ENST00000359680 RGS3P49796 1198 aa12.92□□□□□ -0.34
TRAPPC2-201ENST00000359680 HNRNPMP52272 730 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRAPPC2-201ENST00000359680 DUSP27Q5VZP5 1158 aa12.92□□□□□ -0.34
TRAPPC2-201ENST00000359680 ABCC10Q5T3U5 1492 aa12.92□□□□□ -0.34
TRAPPC2-201ENST00000359680 CARMIL2Q6F5E8 1435 aa12.92□□□□□ -0.34
TRAPPC2-201ENST00000359680 MAGI1Q96QZ7 1491 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC2-201ENST00000359680 FRAT2O75474 233 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC2-201ENST00000359680 GOLGA2Q08379 1002 aa12.91□□□□□ -0.34
TRAPPC2-201ENST00000359680 ARHGEF5Q12774 1597 aa12.9□□□□□ -0.34
TRAPPC2-201ENST00000359680 DNAJC5BQ9UF47 199 aa12.9□□□□□ -0.34
TRAPPC2-201ENST00000359680 EIF2AK4Q9P2K8 1649 aaKnown RBP12.9□□□□□ -0.34
TRAPPC2-201ENST00000359680 A2MP01023 1474 aa12.9□□□□□ -0.34
TRAPPC2-201ENST00000359680 PLEKHH1Q9ULM0 1364 aa12.9□□□□□ -0.34
TRAPPC2-201ENST00000359680 KNSTRNQ9Y448 316 aa12.89□□□□□ -0.35
TRAPPC2-201ENST00000359680 MYO5CQ9NQX4 1742 aa12.88□□□□□ -0.35
TRAPPC2-201ENST00000359680 CCDC141Q6ZP82 1450 aa12.88□□□□□ -0.35
TRAPPC2-201ENST00000359680 EIF5BO60841 1220 aaKnown RBP12.87□□□□□ -0.35
TRAPPC2-201ENST00000359680 PPP2R1AP30153 589 aa12.87□□□□□ -0.35
TRAPPC2-201ENST00000359680 CHMP7Q8WUX9 453 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC2-201ENST00000359680 EIF3AQ14152 1382 aaKnown RBP12.87□□□□□ -0.35
TRAPPC2-201ENST00000359680 ZNF521Q96K83 1311 aa12.86□□□□□ -0.35
TRAPPC2-201ENST00000359680 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.86□□□□□ -0.35
TRAPPC2-201ENST00000359680 ABCA8O94911 1581 aa12.86□□□□□ -0.35
TRAPPC2-201ENST00000359680 ATP10BO94823 1461 aa12.85□□□□□ -0.35
TRAPPC2-201ENST00000359680 NUP160Q12769 1436 aa12.85□□□□□ -0.35
TRAPPC2-201ENST00000359680 SLFN5Q08AF3 891 aa12.85□□□□□ -0.35
TRAPPC2-201ENST00000359680 VIRMAQ69YN4 1812 aaKnown RBP12.85□□□□□ -0.35
TRAPPC2-201ENST00000359680 PLA2R1Q13018 1463 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms