RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 ADGBQ8N7X0 1667 aa7.31□□□□□ -1.24
ATXN3-202ENST00000359366 ARHGEF12Q9NZN5 1544 aa7.31□□□□□ -1.24
ATXN3-202ENST00000359366 KIF15Q9NS87 1388 aa7.3□□□□□ -1.24
ATXN3-202ENST00000359366 AFAP1Q8N556 730 aa7.3□□□□□ -1.24
ATXN3-202ENST00000359366 ASXL2Q76L83 1435 aa7.3□□□□□ -1.24
ATXN3-202ENST00000359366 ANKRD50Q9ULJ7 1429 aa7.3□□□□□ -1.24
ATXN3-202ENST00000359366 POTEIP0CG38 1075 aa7.3□□□□□ -1.24
ATXN3-202ENST00000359366 PPP1R15AO75807 674 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-202ENST00000359366 MIER1Q8N108 512 aa7.29□□□□□ -1.24
ATXN3-202ENST00000359366 CCDC141Q6ZP82 1450 aa7.29□□□□□ -1.24
ATXN3-202ENST00000359366 WDR7Q9Y4E6 1490 aa7.29□□□□□ -1.24
ATXN3-202ENST00000359366 PKD2Q13563 968 aa7.29□□□□□ -1.24
ATXN3-202ENST00000359366 NUP155O75694 1391 aa7.29□□□□□ -1.24
ATXN3-202ENST00000359366 ADGRL2O95490 1459 aa7.28□□□□□ -1.24
ATXN3-202ENST00000359366 PZPP20742 1482 aa7.28□□□□□ -1.24
ATXN3-202ENST00000359366 NPM1P06748 294 aaKnown RBP eCLIP7.28□□□□□ -1.24
ATXN3-202ENST00000359366 EFCAB2Q5VUJ9 269 aa7.28□□□□□ -1.24
ATXN3-202ENST00000359366 MYT1LQ9UL68 1186 aa7.28□□□□□ -1.24
ATXN3-202ENST00000359366 PLCH2O75038 1416 aa7.28□□□□□ -1.24
ATXN3-202ENST00000359366 TRAPPC8Q9Y2L5 1435 aa7.28□□□□□ -1.24
ATXN3-202ENST00000359366 L3MBTL2Q969R5 705 aa7.27□□□□□ -1.25
ATXN3-202ENST00000359366 ARHGEF5Q12774 1597 aa7.27□□□□□ -1.25
ATXN3-202ENST00000359366 YTHDC1Q96MU7 727 aaKnown RBP7.26□□□□□ -1.25
ATXN3-202ENST00000359366 ANKRD30BQ9BXX2 1392 aa7.26□□□□□ -1.25
ATXN3-202ENST00000359366 SHANK2Q9UPX8 1470 aa7.26□□□□□ -1.25
ATXN3-202ENST00000359366 ZNF326Q5BKZ1 582 aaKnown RBP7.26□□□□□ -1.25
ATXN3-202ENST00000359366 CENPBP07199 599 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-202ENST00000359366 FANCAO15360 1455 aa7.25□□□□□ -1.25
ATXN3-202ENST00000359366 PLEKHH2Q8IVE3 1493 aa7.25□□□□□ -1.25
ATXN3-202ENST00000359366 ABCC1P33527 1531 aa7.24□□□□□ -1.25
ATXN3-202ENST00000359366 CLCN6P51797 869 aa7.24□□□□□ -1.25
ATXN3-202ENST00000359366 SPAG9O60271 1321 aaKnown RBP7.24□□□□□ -1.25
ATXN3-202ENST00000359366 DDX10Q13206 875 aaKnown RBP7.23□□□□□ -1.25
ATXN3-202ENST00000359366 NBPF8Q3BBV2 869 aa7.23□□□□□ -1.25
ATXN3-202ENST00000359366 SCAPERQ9BY12 1400 aa7.23□□□□□ -1.25
ATXN3-202ENST00000359366 KIAA1107Q9UPP5 1409 aa7.23□□□□□ -1.25
ATXN3-202ENST00000359366 RIMBP3CA6NJZ7 1639 aa7.23□□□□□ -1.25
ATXN3-202ENST00000359366 RIMBP3BA6NNM3 1639 aa7.23□□□□□ -1.25
ATXN3-202ENST00000359366 ABCA9Q8IUA7 1624 aa7.23□□□□□ -1.25
ATXN3-202ENST00000359366 RIMBP3Q9UFD9 1639 aa7.23□□□□□ -1.25
ATXN3-202ENST00000359366 RSPH4AQ5TD94 716 aa7.22□□□□□ -1.25
ATXN3-202ENST00000359366 OTUD5Q96G74 571 aa7.22□□□□□ -1.25
ATXN3-202ENST00000359366 TIMELESSQ9UNS1 1208 aa7.22□□□□□ -1.25
ATXN3-202ENST00000359366 KDM2AQ9Y2K7 1162 aa7.22□□□□□ -1.25
ATXN3-202ENST00000359366 ADGRL1O94910 1474 aa7.22□□□□□ -1.25
ATXN3-202ENST00000359366 RPRD2Q5VT52 1461 aaKnown RBP7.22□□□□□ -1.25
ATXN3-202ENST00000359366 CD109Q6YHK3 1445 aa7.21□□□□□ -1.25
ATXN3-202ENST00000359366 RAPGEF3O95398 923 aa7.21□□□□□ -1.26
ATXN3-202ENST00000359366 RGL3Q3MIN7 710 aa7.21□□□□□ -1.26
ATXN3-202ENST00000359366 DCBLD2Q96PD2 775 aa7.21□□□□□ -1.26
ATXN3-202ENST00000359366 FAM135AQ9P2D6 1515 aa7.21□□□□□ -1.26
ATXN3-202ENST00000359366 TEX14Q8IWB6 1497 aa7.2□□□□□ -1.26
ATXN3-202ENST00000359366 HSPA5P11021 654 aaKnown RBP7.2□□□□□ -1.26
ATXN3-202ENST00000359366 MAST1Q9Y2H9 1570 aa7.2□□□□□ -1.26
ATXN3-202ENST00000359366 ZFYVE16Q7Z3T8 1539 aa7.19□□□□□ -1.26
ATXN3-202ENST00000359366 KIF3BO15066 747 aa7.19□□□□□ -1.26
ATXN3-202ENST00000359366 PLXNC1O60486 1568 aa7.19□□□□□ -1.26
ATXN3-202ENST00000359366 DUOX2Q9NRD8 1548 aa7.18□□□□□ -1.26
ATXN3-202ENST00000359366 FAM69CQ0P6D2 419 aa7.18□□□□□ -1.26
ATXN3-202ENST00000359366 DCAF11Q8TEB1 546 aa7.18□□□□□ -1.26
ATXN3-202ENST00000359366 RTN4Q9NQC3 1192 aaKnown RBP7.18□□□□□ -1.26
ATXN3-202ENST00000359366 ATP7AQ04656 1500 aa7.18□□□□□ -1.26
ATXN3-202ENST00000359366 TSPOAP1O95153 1857 aa7.18□□□□□ -1.26
ATXN3-202ENST00000359366 C11orf95C9JLR9 678 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-202ENST00000359366 PLA2R1Q13018 1463 aa7.17□□□□□ -1.26
ATXN3-202ENST00000359366 ARAP3Q8WWN8 1544 aa7.17□□□□□ -1.26
ATXN3-202ENST00000359366 KDM5DQ9BY66 1539 aa7.17□□□□□ -1.26
ATXN3-202ENST00000359366 UNC13BO14795 1591 aa7.16□□□□□ -1.26
ATXN3-202ENST00000359366 CFAP65Q6ZU64 1925 aaKnown RBP7.16□□□□□ -1.26
ATXN3-202ENST00000359366 KIDINS220Q9ULH0 1771 aa7.16□□□□□ -1.26
ATXN3-202ENST00000359366 EIF4G2P78344 907 aaKnown RBP eCLIP7.15□□□□□ -1.26
ATXN3-202ENST00000359366 CNGB1Q14028 1251 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-202ENST00000359366 GGT6Q6P531 493 aa7.15□□□□□ -1.26
ATXN3-202ENST00000359366 ERBINQ96RT1 1412 aa7.15□□□□□ -1.26
ATXN3-202ENST00000359366 POLR3GLQ9BT43 218 aa7.15□□□□□ -1.26
ATXN3-202ENST00000359366 INO80Q9ULG1 1556 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-202ENST00000359366 WASHC2AQ641Q2 1341 aa7.15□□□□□ -1.27
ATXN3-202ENST00000359366 CCDC144AA2RUR9 1427 aa7.15□□□□□ -1.27
ATXN3-202ENST00000359366 ACIN1Q9UKV3 1341 aaKnown RBP7.14□□□□□ -1.27
ATXN3-202ENST00000359366 IQGAP3Q86VI3 1631 aa7.14□□□□□ -1.27
ATXN3-202ENST00000359366 RTEL1-TNFRSF6BF6WH68 1400 aa7.14□□□□□ -1.27
ATXN3-202ENST00000359366 POGZQ7Z3K3 1410 aa7.14□□□□□ -1.27
ATXN3-202ENST00000359366 CLEC11AQ9Y240 323 aa7.14□□□□□ -1.27
ATXN3-202ENST00000359366 ZNF518AQ6AHZ1 1483 aa7.13□□□□□ -1.27
ATXN3-202ENST00000359366 SPDYE1Q8NFV5 336 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-202ENST00000359366 DHX29Q7Z478 1369 aaKnown RBP7.13□□□□□ -1.27
ATXN3-202ENST00000359366 NBPF1Q3BBV0 1214 aa7.13□□□□□ -1.27
ATXN3-202ENST00000359366 E9PCH4 1651 aa7.12□□□□□ -1.27
ATXN3-202ENST00000359366 MAGI2Q86UL8 1455 aa7.12□□□□□ -1.27
ATXN3-202ENST00000359366 UGGT1Q9NYU2 1555 aa7.12□□□□□ -1.27
ATXN3-202ENST00000359366 EIF5BO60841 1220 aaKnown RBP7.12□□□□□ -1.27
ATXN3-202ENST00000359366 CARD11Q9BXL7 1154 aa7.12□□□□□ -1.27
ATXN3-202ENST00000359366 YEATS2Q9ULM3 1422 aa7.11□□□□□ -1.27
ATXN3-202ENST00000359366 A2MP01023 1474 aa7.11□□□□□ -1.27
ATXN3-202ENST00000359366 FOXD4L1Q9NU39 408 aa7.11□□□□□ -1.27
ATXN3-202ENST00000359366 ABCA6Q8N139 1617 aa7.11□□□□□ -1.27
ATXN3-202ENST00000359366 MAP3K4Q9Y6R4 1608 aa7.11□□□□□ -1.27
ATXN3-202ENST00000359366 USP47Q96K76 1375 aa7.11□□□□□ -1.27
ATXN3-202ENST00000359366 MROH1Q8NDA8 1641 aa7.11□□□□□ -1.27
ATXN3-202ENST00000359366 FRMPD1Q5SYB0 1578 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms