RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 FBXO31Q5XUX0 539 aaPredicted RBP15.74■□□□□ 0.11
TRAPPC4-201ENST00000359005 UHRF1BP1Q6BDS2 1440 aa15.73■□□□□ 0.11
TRAPPC4-201ENST00000359005 DAPK1P53355 1430 aa15.72■□□□□ 0.11
TRAPPC4-201ENST00000359005 PPP6R1Q9UPN7 881 aa15.72■□□□□ 0.11
TRAPPC4-201ENST00000359005 DHX57Q6P158 1386 aaKnown RBP15.72■□□□□ 0.11
TRAPPC4-201ENST00000359005 PTPRKQ15262 1439 aa15.71■□□□□ 0.11
TRAPPC4-201ENST00000359005 GCC2Q8IWJ2 1684 aa15.71■□□□□ 0.11
TRAPPC4-201ENST00000359005 C3P01024 1663 aa15.7■□□□□ 0.1
TRAPPC4-201ENST00000359005 ABCC5O15440 1437 aa15.68■□□□□ 0.1
TRAPPC4-201ENST00000359005 NPATQ14207 1427 aa15.68■□□□□ 0.1
TRAPPC4-201ENST00000359005 ADGBQ8N7X0 1667 aa15.68■□□□□ 0.1
TRAPPC4-201ENST00000359005 FBXO41Q8TF61 875 aa15.68■□□□□ 0.1
TRAPPC4-201ENST00000359005 NAIPQ13075 1403 aa15.68■□□□□ 0.1
TRAPPC4-201ENST00000359005 NCKAP5LQ9HCH0 1330 aa15.68■□□□□ 0.1
TRAPPC4-201ENST00000359005 ARHGEF5Q12774 1597 aa15.67■□□□□ 0.1
TRAPPC4-201ENST00000359005 SHANK2Q9UPX8 1470 aa15.67■□□□□ 0.1
TRAPPC4-201ENST00000359005 RRP7BPQ9NSQ0 103 aa15.67■□□□□ 0.1
TRAPPC4-201ENST00000359005 WASHC2CQ9Y4E1 1318 aa15.67■□□□□ 0.1
TRAPPC4-201ENST00000359005 CERKQ8TCT0 537 aa15.66■□□□□ 0.1
TRAPPC4-201ENST00000359005 ANKRD30AQ9BXX3 1397 aa15.65■□□□□ 0.1
TRAPPC4-201ENST00000359005 CHIC2Q9UKJ5 165 aa15.65■□□□□ 0.1
TRAPPC4-201ENST00000359005 SETD1BQ9UPS6 1966 aaKnown RBP15.65■□□□□ 0.1
TRAPPC4-201ENST00000359005 CROCC2H7BZ55 1655 aa15.64■□□□□ 0.09
TRAPPC4-201ENST00000359005 TIMELESSQ9UNS1 1208 aa15.64■□□□□ 0.09
TRAPPC4-201ENST00000359005 PREX1Q8TCU6 1659 aa15.63■□□□□ 0.09
TRAPPC4-201ENST00000359005 NCOA1Q15788 1441 aa15.63■□□□□ 0.09
TRAPPC4-201ENST00000359005 ADGRL2O95490 1459 aa15.63■□□□□ 0.09
TRAPPC4-201ENST00000359005 DMRT2Q9Y5R5 561 aa15.62■□□□□ 0.09
TRAPPC4-201ENST00000359005 CLTCQ00610 1675 aaKnown RBP15.62■□□□□ 0.09
TRAPPC4-201ENST00000359005 STRCQ7RTU9 1775 aa15.62■□□□□ 0.09
TRAPPC4-201ENST00000359005 KIF15Q9NS87 1388 aa15.6■□□□□ 0.09
TRAPPC4-201ENST00000359005 TNRQ92752 1358 aa15.59■□□□□ 0.09
TRAPPC4-201ENST00000359005 PTPRTO14522 1441 aa15.59■□□□□ 0.09
TRAPPC4-201ENST00000359005 MAST1Q9Y2H9 1570 aa15.58■□□□□ 0.09
TRAPPC4-201ENST00000359005 MROH2AA6NES4 1674 aa15.57■□□□□ 0.08
TRAPPC4-201ENST00000359005 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.57■□□□□ 0.08
TRAPPC4-201ENST00000359005 CAMSAP1Q5T5Y3 1602 aa15.57■□□□□ 0.08
TRAPPC4-201ENST00000359005 TRIM52Q96A61 297 aa15.56■□□□□ 0.08
TRAPPC4-201ENST00000359005 PZPP20742 1482 aa15.56■□□□□ 0.08
TRAPPC4-201ENST00000359005 KDM5DQ9BY66 1539 aa15.55■□□□□ 0.08
TRAPPC4-201ENST00000359005 ABCC3O15438 1527 aa15.54■□□□□ 0.08
TRAPPC4-201ENST00000359005 ZNF335Q9H4Z2 1342 aaPredicted RBP15.54■□□□□ 0.08
TRAPPC4-201ENST00000359005 A2ML1A8K2U0 1454 aa15.53■□□□□ 0.08
TRAPPC4-201ENST00000359005 PKD2Q13563 968 aa15.53■□□□□ 0.08
TRAPPC4-201ENST00000359005 MROH1Q8NDA8 1641 aa15.53■□□□□ 0.08
TRAPPC4-201ENST00000359005 DUOX2Q9NRD8 1548 aa15.53■□□□□ 0.08
TRAPPC4-201ENST00000359005 CEP170BQ9Y4F5 1589 aaPredicted RBP15.52■□□□□ 0.07
TRAPPC4-201ENST00000359005 ANKRD50Q9ULJ7 1429 aa15.51■□□□□ 0.07
TRAPPC4-201ENST00000359005 PLA2R1Q13018 1463 aa15.5■□□□□ 0.07
TRAPPC4-201ENST00000359005 LTBP4Q8N2S1 1624 aa15.5■□□□□ 0.07
TRAPPC4-201ENST00000359005 MYO3AQ8NEV4 1616 aa15.5■□□□□ 0.07
TRAPPC4-201ENST00000359005 RNF17Q9BXT8 1623 aaKnown RBP15.49■□□□□ 0.07
TRAPPC4-201ENST00000359005 THEMISQ8N1K5 641 aaPredicted RBP15.48■□□□□ 0.07
TRAPPC4-201ENST00000359005 ERBINQ96RT1 1412 aa15.48■□□□□ 0.07
TRAPPC4-201ENST00000359005 ERVK-7P63135 1459 aa15.47■□□□□ 0.07
TRAPPC4-201ENST00000359005 ANKLE2Q86XL3 938 aa15.47■□□□□ 0.07
TRAPPC4-201ENST00000359005 FAM135AQ9P2D6 1515 aa15.47■□□□□ 0.07
TRAPPC4-201ENST00000359005 MPHOSPH9Q99550 1183 aa15.46■□□□□ 0.07
TRAPPC4-201ENST00000359005 TONSLQ96HA7 1378 aa15.46■□□□□ 0.07
TRAPPC4-201ENST00000359005 LTKP29376 864 aa15.45■□□□□ 0.06
TRAPPC4-201ENST00000359005 NLRP1Q9C000 1473 aa15.45■□□□□ 0.06
TRAPPC4-201ENST00000359005 IDI1Q13907 227 aa15.44■□□□□ 0.06
TRAPPC4-201ENST00000359005 SLC4A1APQ9BWU0 796 aaKnown RBP15.44■□□□□ 0.06
TRAPPC4-201ENST00000359005 ARHGAP31Q2M1Z3 1444 aa15.43■□□□□ 0.06
TRAPPC4-201ENST00000359005 SPATA31D1Q6ZQQ2 1576 aa15.43■□□□□ 0.06
TRAPPC4-201ENST00000359005 ZNF142P52746 1687 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC4-201ENST00000359005 EIF2AK4Q9P2K8 1649 aaKnown RBP15.43■□□□□ 0.06
TRAPPC4-201ENST00000359005 ZNF316A6NFI3 1004 aaPredicted RBP15.42■□□□□ 0.06
TRAPPC4-201ENST00000359005 NEUROD1Q13562 356 aa15.42■□□□□ 0.06
TRAPPC4-201ENST00000359005 PRDM15P57071 1507 aaPredicted RBP15.41■□□□□ 0.06
TRAPPC4-201ENST00000359005 NEURL4Q96JN8 1562 aa15.41■□□□□ 0.06
TRAPPC4-201ENST00000359005 UGGT1Q9NYU2 1555 aa15.41■□□□□ 0.06
TRAPPC4-201ENST00000359005 KANK1Q14678 1352 aa15.39■□□□□ 0.05
TRAPPC4-201ENST00000359005 VWDEQ8N2E2 1590 aa15.39■□□□□ 0.05
TRAPPC4-201ENST00000359005 NUP155O75694 1391 aa15.38■□□□□ 0.05
TRAPPC4-201ENST00000359005 NPHP4O75161 1426 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC4-201ENST00000359005 TXNDC2Q86VQ3 553 aa15.38■□□□□ 0.05
TRAPPC4-201ENST00000359005 LMTK2Q8IWU2 1503 aa15.37■□□□□ 0.05
TRAPPC4-201ENST00000359005 MED14O60244 1454 aa15.36■□□□□ 0.05
TRAPPC4-201ENST00000359005 SIN3AQ96ST3 1273 aa15.36■□□□□ 0.05
TRAPPC4-201ENST00000359005 CEP152O94986 1710 aa15.36■□□□□ 0.05
TRAPPC4-201ENST00000359005 NOS1P29475 1434 aa15.35■□□□□ 0.05
TRAPPC4-201ENST00000359005 UBAP1LF5GYI3 381 aa15.35■□□□□ 0.05
TRAPPC4-201ENST00000359005 UNC13BO14795 1591 aa15.35■□□□□ 0.05
TRAPPC4-201ENST00000359005 DEPDC5O75140 1603 aa15.35■□□□□ 0.05
TRAPPC4-201ENST00000359005 ARHGAP23Q9P227 1491 aa15.33■□□□□ 0.05
TRAPPC4-201ENST00000359005 ZC3H13Q5T200 1668 aaKnown RBP15.33■□□□□ 0.04
TRAPPC4-201ENST00000359005 ANKRD30BQ9BXX2 1392 aa15.33■□□□□ 0.04
TRAPPC4-201ENST00000359005 TMEM2Q9UHN6 1383 aa15.33■□□□□ 0.04
TRAPPC4-201ENST00000359005 CFAP65Q6ZU64 1925 aaKnown RBP15.33■□□□□ 0.04
TRAPPC4-201ENST00000359005 PPP1R15AO75807 674 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC4-201ENST00000359005 SENP3Q9H4L4 574 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC4-201ENST00000359005 STAG3Q9UJ98 1225 aa15.31■□□□□ 0.04
TRAPPC4-201ENST00000359005 RPRD2Q5VT52 1461 aaKnown RBP15.31■□□□□ 0.04
TRAPPC4-201ENST00000359005 SCAF11Q99590 1463 aaKnown RBP15.3■□□□□ 0.04
TRAPPC4-201ENST00000359005 SLC52A1Q9NWF4 448 aa15.3■□□□□ 0.04
TRAPPC4-201ENST00000359005 IQGAP3Q86VI3 1631 aa15.29■□□□□ 0.04
TRAPPC4-201ENST00000359005 SYNMO15061 1565 aa15.29■□□□□ 0.04
TRAPPC4-201ENST00000359005 IQSEC2Q5JU85 1478 aa15.29■□□□□ 0.04
TRAPPC4-201ENST00000359005 SLC26A8Q96RN1 970 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms