RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 KDM2AQ9Y2K7 1162 aa17.89■□□□□ 0.45
GGPS1-202ENST00000358966 UNC13BO14795 1591 aa17.89■□□□□ 0.45
GGPS1-202ENST00000358966 HSPA5P11021 654 aaKnown RBP17.88■□□□□ 0.45
GGPS1-202ENST00000358966 RGL3Q3MIN7 710 aa17.87■□□□□ 0.45
GGPS1-202ENST00000358966 ERBINQ96RT1 1412 aa17.87■□□□□ 0.45
GGPS1-202ENST00000358966 KIF3BO15066 747 aa17.86■□□□□ 0.45
GGPS1-202ENST00000358966 INO80Q9ULG1 1556 aaPredicted RBP17.86■□□□□ 0.45
GGPS1-202ENST00000358966 PLA2R1Q13018 1463 aa17.85■□□□□ 0.45
GGPS1-202ENST00000358966 RTEL1-TNFRSF6BF6WH68 1400 aa17.83■□□□□ 0.44
GGPS1-202ENST00000358966 IQGAP3Q86VI3 1631 aa17.83■□□□□ 0.44
GGPS1-202ENST00000358966 KIDINS220Q9ULH0 1771 aa17.83■□□□□ 0.44
GGPS1-202ENST00000358966 DCAF11Q8TEB1 546 aa17.82■□□□□ 0.44
GGPS1-202ENST00000358966 FAM69CQ0P6D2 419 aa17.82■□□□□ 0.44
GGPS1-202ENST00000358966 ZNF518AQ6AHZ1 1483 aa17.8■□□□□ 0.44
GGPS1-202ENST00000358966 MAGI2Q86UL8 1455 aa17.8■□□□□ 0.44
GGPS1-202ENST00000358966 CCDC144AA2RUR9 1427 aa17.8■□□□□ 0.44
GGPS1-202ENST00000358966 POGZQ7Z3K3 1410 aa17.8■□□□□ 0.44
GGPS1-202ENST00000358966 C11orf95C9JLR9 678 aaPredicted RBP17.79■□□□□ 0.44
GGPS1-202ENST00000358966 EIF4G2P78344 907 aaKnown RBP eCLIP17.79■□□□□ 0.44
GGPS1-202ENST00000358966 TSPOAP1O95153 1857 aa17.79■□□□□ 0.44
GGPS1-202ENST00000358966 WASHC2AQ641Q2 1341 aa17.77■□□□□ 0.43
GGPS1-202ENST00000358966 DHX29Q7Z478 1369 aaKnown RBP17.76■□□□□ 0.43
GGPS1-202ENST00000358966 E9PCH4 1651 aa17.75■□□□□ 0.43
GGPS1-202ENST00000358966 GGT6Q6P531 493 aa17.75■□□□□ 0.43
GGPS1-202ENST00000358966 MAP3K4Q9Y6R4 1608 aa17.74■□□□□ 0.43
GGPS1-202ENST00000358966 KDM5CP41229 1560 aa17.73■□□□□ 0.43
GGPS1-202ENST00000358966 MROH1Q8NDA8 1641 aa17.72■□□□□ 0.43
GGPS1-202ENST00000358966 CFAP74Q9C0B2 1584 aa17.72■□□□□ 0.43
GGPS1-202ENST00000358966 DEPDC5O75140 1603 aa17.72■□□□□ 0.43
GGPS1-202ENST00000358966 ABCA6Q8N139 1617 aa17.72■□□□□ 0.43
GGPS1-202ENST00000358966 DIP2BQ9P265 1576 aa17.72■□□□□ 0.43
GGPS1-202ENST00000358966 A2MP01023 1474 aa17.71■□□□□ 0.43
GGPS1-202ENST00000358966 CFAP65Q6ZU64 1925 aaKnown RBP17.71■□□□□ 0.43
GGPS1-202ENST00000358966 FRMPD1Q5SYB0 1578 aa17.71■□□□□ 0.43
GGPS1-202ENST00000358966 HECW2Q9P2P5 1572 aa17.71■□□□□ 0.43
GGPS1-202ENST00000358966 POLR3GLQ9BT43 218 aa17.7■□□□□ 0.42
GGPS1-202ENST00000358966 YEATS2Q9ULM3 1422 aa17.7■□□□□ 0.42
GGPS1-202ENST00000358966 ATP10AO60312 1499 aa17.7■□□□□ 0.42
GGPS1-202ENST00000358966 UGGT1Q9NYU2 1555 aa17.7■□□□□ 0.42
GGPS1-202ENST00000358966 NEO1Q92859 1461 aa17.69■□□□□ 0.42
GGPS1-202ENST00000358966 USP47Q96K76 1375 aa17.69■□□□□ 0.42
GGPS1-202ENST00000358966 SPATA31E1Q6ZUB1 1445 aa17.68■□□□□ 0.42
GGPS1-202ENST00000358966 NBPF1Q3BBV0 1214 aa17.68■□□□□ 0.42
GGPS1-202ENST00000358966 CARD11Q9BXL7 1154 aa17.68■□□□□ 0.42
GGPS1-202ENST00000358966 KANK1Q14678 1352 aa17.68■□□□□ 0.42
GGPS1-202ENST00000358966 MLH3Q9UHC1 1453 aa17.67■□□□□ 0.42
GGPS1-202ENST00000358966 PRDM15P57071 1507 aaPredicted RBP17.67■□□□□ 0.42
GGPS1-202ENST00000358966 CEP152O94986 1710 aa17.67■□□□□ 0.42
GGPS1-202ENST00000358966 RICTORQ6R327 1708 aa17.66■□□□□ 0.42
GGPS1-202ENST00000358966 CNGB1Q14028 1251 aaPredicted RBP17.65■□□□□ 0.42
GGPS1-202ENST00000358966 VWDEQ8N2E2 1590 aa17.65■□□□□ 0.42
GGPS1-202ENST00000358966 UHRF1BP1Q6BDS2 1440 aa17.65■□□□□ 0.42
GGPS1-202ENST00000358966 TET3O43151 1660 aa17.64■□□□□ 0.42
GGPS1-202ENST00000358966 EIF2AK4Q9P2K8 1649 aaKnown RBP17.64■□□□□ 0.41
GGPS1-202ENST00000358966 SPHKAPQ2M3C7 1700 aa17.64■□□□□ 0.41
GGPS1-202ENST00000358966 ROCK2O75116 1388 aaKnown RBP17.64■□□□□ 0.41
GGPS1-202ENST00000358966 CLTCL1P53675 1640 aa17.64■□□□□ 0.41
GGPS1-202ENST00000358966 KIF7Q2M1P5 1343 aa17.64■□□□□ 0.41
GGPS1-202ENST00000358966 RALGAPBQ86X10 1494 aa17.63■□□□□ 0.41
GGPS1-202ENST00000358966 GLI2P10070 1586 aa17.63■□□□□ 0.41
GGPS1-202ENST00000358966 BCORL1Q5H9F3 1711 aa17.63■□□□□ 0.41
GGPS1-202ENST00000358966 PPRC1Q5VV67 1664 aaKnown RBP17.63■□□□□ 0.41
GGPS1-202ENST00000358966 PRAG1Q86YV5 1406 aa17.63■□□□□ 0.41
GGPS1-202ENST00000358966 CCDC7Q96M83 1385 aa17.63■□□□□ 0.41
GGPS1-202ENST00000358966 DIP2CQ9Y2E4 1556 aa17.62■□□□□ 0.41
GGPS1-202ENST00000358966 ST20-MTHFSA0A0A6YYL1 179 aa17.62■□□□□ 0.41
GGPS1-202ENST00000358966 TRPM2O94759 1503 aa17.61■□□□□ 0.41
GGPS1-202ENST00000358966 WASHC2CQ9Y4E1 1318 aa17.6■□□□□ 0.41
GGPS1-202ENST00000358966 ANP32CO43423 234 aa17.6■□□□□ 0.41
GGPS1-202ENST00000358966 EFCAB6Q5THR3 1501 aa17.59■□□□□ 0.41
GGPS1-202ENST00000358966 PTPRTO14522 1441 aa17.59■□□□□ 0.41
GGPS1-202ENST00000358966 CHGAP10645 457 aaKnown RBP17.58■□□□□ 0.4
GGPS1-202ENST00000358966 SENP3Q9H4L4 574 aaPredicted RBP17.58■□□□□ 0.4
GGPS1-202ENST00000358966 KIF13AQ9H1H9 1805 aa17.58■□□□□ 0.4
GGPS1-202ENST00000358966 NPATQ14207 1427 aa17.57■□□□□ 0.4
GGPS1-202ENST00000358966 TRPM1Q7Z4N2 1603 aa17.57■□□□□ 0.4
GGPS1-202ENST00000358966 RNF17Q9BXT8 1623 aaKnown RBP17.57■□□□□ 0.4
GGPS1-202ENST00000358966 COL17A1Q9UMD9 1497 aaPredicted RBP17.57■□□□□ 0.4
GGPS1-202ENST00000358966 MLECQ14165 292 aa17.53■□□□□ 0.4
GGPS1-202ENST00000358966 ABCC3O15438 1527 aa17.53■□□□□ 0.4
GGPS1-202ENST00000358966 CNTLNQ9NXG0 1405 aa17.53■□□□□ 0.4
GGPS1-202ENST00000358966 NUTM2DQ5VT03 806 aaPredicted RBP17.52■□□□□ 0.4
GGPS1-202ENST00000358966 TSHZ2Q9NRE2 1034 aa17.52■□□□□ 0.4
GGPS1-202ENST00000358966 MROH2AA6NES4 1674 aa17.51■□□□□ 0.39
GGPS1-202ENST00000358966 SIGLEC1Q9BZZ2 1709 aa17.5■□□□□ 0.39
GGPS1-202ENST00000358966 CCDC184Q52MB2 194 aa17.49■□□□□ 0.39
GGPS1-202ENST00000358966 ADGRF5Q8IZF2 1346 aa17.49■□□□□ 0.39
GGPS1-202ENST00000358966 LMTK2Q8IWU2 1503 aa17.49■□□□□ 0.39
GGPS1-202ENST00000358966 MADDQ8WXG6 1647 aa17.48■□□□□ 0.39
GGPS1-202ENST00000358966 POLR1AO95602 1720 aaPredicted RBP17.48■□□□□ 0.39
GGPS1-202ENST00000358966 CAMSAP1Q5T5Y3 1602 aa17.47■□□□□ 0.39
GGPS1-202ENST00000358966 FBXO31Q5XUX0 539 aaPredicted RBP17.46■□□□□ 0.39
GGPS1-202ENST00000358966 ZMYM4Q5VZL5 1548 aa17.46■□□□□ 0.39
GGPS1-202ENST00000358966 CFAP70Q5T0N1 1121 aa17.46■□□□□ 0.39
GGPS1-202ENST00000358966 KIF1BO60333 1816 aa17.46■□□□□ 0.38
GGPS1-202ENST00000358966 ANO8Q9HCE9 1232 aaPredicted RBP17.45■□□□□ 0.38
GGPS1-202ENST00000358966 GPRASP1Q5JY77 1395 aa17.45■□□□□ 0.38
GGPS1-202ENST00000358966 DISP3Q9P2K9 1392 aa17.43■□□□□ 0.38
GGPS1-202ENST00000358966 NOS1P29475 1434 aa17.43■□□□□ 0.38
GGPS1-202ENST00000358966 TESK2Q96S53 571 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms