RNA–Protein interactions for RNA: ENST00000357490.6

COPS7B-202, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-202ENST00000357490 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.54■■□□□ 1.52
COPS7B-202ENST00000357490 MAST1Q9Y2H9 1570 aa24.54■■□□□ 1.52
COPS7B-202ENST00000357490 GGT6Q6P531 493 aa24.54■■□□□ 1.52
COPS7B-202ENST00000357490 CHIC2Q9UKJ5 165 aa24.53■■□□□ 1.52
COPS7B-202ENST00000357490 DHX29Q7Z478 1369 aaKnown RBP24.53■■□□□ 1.52
COPS7B-202ENST00000357490 SHANK2Q9UPX8 1470 aa24.51■■□□□ 1.51
COPS7B-202ENST00000357490 ZNF142P52746 1687 aaPredicted RBP24.51■■□□□ 1.51
COPS7B-202ENST00000357490 ITGAEP38570 1179 aa24.51■■□□□ 1.51
COPS7B-202ENST00000357490 PTPRKQ15262 1439 aa24.5■■□□□ 1.51
COPS7B-202ENST00000357490 MYO3AQ8NEV4 1616 aa24.5■■□□□ 1.51
COPS7B-202ENST00000357490 FAM135AQ9P2D6 1515 aa24.49■■□□□ 1.51
COPS7B-202ENST00000357490 PTPRTO14522 1441 aa24.48■■□□□ 1.51
COPS7B-202ENST00000357490 CERKQ8TCT0 537 aa24.48■■□□□ 1.51
COPS7B-202ENST00000357490 NCOA1Q15788 1441 aa24.46■■□□□ 1.51
COPS7B-202ENST00000357490 RRP7BPQ9NSQ0 103 aa24.46■■□□□ 1.51
COPS7B-202ENST00000357490 CAMSAP1Q5T5Y3 1602 aa24.46■■□□□ 1.51
COPS7B-202ENST00000357490 CEP170BQ9Y4F5 1589 aaPredicted RBP24.43■■□□□ 1.5
COPS7B-202ENST00000357490 KIF3BO15066 747 aa24.43■■□□□ 1.5
COPS7B-202ENST00000357490 ANKRD30AQ9BXX3 1397 aa24.42■■□□□ 1.5
COPS7B-202ENST00000357490 KDM5DQ9BY66 1539 aa24.42■■□□□ 1.5
COPS7B-202ENST00000357490 KIF15Q9NS87 1388 aa24.41■■□□□ 1.5
COPS7B-202ENST00000357490 ADGRL2O95490 1459 aa24.4■■□□□ 1.5
COPS7B-202ENST00000357490 PLA2R1Q13018 1463 aa24.38■■□□□ 1.49
COPS7B-202ENST00000357490 EIF2AK4Q9P2K8 1649 aaKnown RBP24.37■■□□□ 1.49
COPS7B-202ENST00000357490 DUOX2Q9NRD8 1548 aa24.36■■□□□ 1.49
COPS7B-202ENST00000357490 RNF17Q9BXT8 1623 aaKnown RBP24.36■■□□□ 1.49
COPS7B-202ENST00000357490 PZPP20742 1482 aa24.35■■□□□ 1.49
COPS7B-202ENST00000357490 ROCK1Q13464 1354 aa24.35■■□□□ 1.49
COPS7B-202ENST00000357490 WASHC2CQ9Y4E1 1318 aa24.35■■□□□ 1.49
COPS7B-202ENST00000357490 ZC3H13Q5T200 1668 aaKnown RBP24.34■■□□□ 1.49
COPS7B-202ENST00000357490 A2ML1A8K2U0 1454 aa24.34■■□□□ 1.49
COPS7B-202ENST00000357490 PKD2Q13563 968 aa24.31■■□□□ 1.48
COPS7B-202ENST00000357490 LTBP4Q8N2S1 1624 aa24.3■■□□□ 1.48
COPS7B-202ENST00000357490 TNRQ92752 1358 aa24.29■■□□□ 1.48
COPS7B-202ENST00000357490 ERBINQ96RT1 1412 aa24.29■■□□□ 1.48
COPS7B-202ENST00000357490 POLR1AO95602 1720 aaPredicted RBP24.29■■□□□ 1.48
COPS7B-202ENST00000357490 NCKAP5LQ9HCH0 1330 aa24.28■■□□□ 1.48
COPS7B-202ENST00000357490 ANKRD50Q9ULJ7 1429 aa24.27■■□□□ 1.48
COPS7B-202ENST00000357490 IQSEC2Q5JU85 1478 aa24.26■■□□□ 1.47
COPS7B-202ENST00000357490 FBXO31Q5XUX0 539 aaPredicted RBP24.25■■□□□ 1.47
COPS7B-202ENST00000357490 ABCC3O15438 1527 aa24.25■■□□□ 1.47
COPS7B-202ENST00000357490 NLRP1Q9C000 1473 aa24.24■■□□□ 1.47
COPS7B-202ENST00000357490 CEP152O94986 1710 aa24.23■■□□□ 1.47
COPS7B-202ENST00000357490 MROH1Q8NDA8 1641 aa24.22■■□□□ 1.47
COPS7B-202ENST00000357490 CFAP65Q6ZU64 1925 aaKnown RBP24.22■■□□□ 1.47
COPS7B-202ENST00000357490 NAIPQ13075 1403 aa24.21■■□□□ 1.47
COPS7B-202ENST00000357490 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.19■■□□□ 1.46
COPS7B-202ENST00000357490 SPATA31D1Q6ZQQ2 1576 aa24.18■■□□□ 1.46
COPS7B-202ENST00000357490 UGGT1Q9NYU2 1555 aa24.18■■□□□ 1.46
COPS7B-202ENST00000357490 HFM1A2PYH4 1435 aa24.18■■□□□ 1.46
COPS7B-202ENST00000357490 PRDM15P57071 1507 aaPredicted RBP24.16■■□□□ 1.46
COPS7B-202ENST00000357490 GCC2Q8IWJ2 1684 aa24.16■■□□□ 1.46
COPS7B-202ENST00000357490 THEMISQ8N1K5 641 aaPredicted RBP24.16■■□□□ 1.46
COPS7B-202ENST00000357490 DEPDC5O75140 1603 aa24.16■■□□□ 1.46
COPS7B-202ENST00000357490 ZNF335Q9H4Z2 1342 aaPredicted RBP24.15■■□□□ 1.46
COPS7B-202ENST00000357490 NEURL4Q96JN8 1562 aa24.15■■□□□ 1.46
COPS7B-202ENST00000357490 ERVK-7P63135 1459 aa24.13■■□□□ 1.45
COPS7B-202ENST00000357490 ANKLE2Q86XL3 938 aa24.12■■□□□ 1.45
COPS7B-202ENST00000357490 KANK1Q14678 1352 aa24.09■■□□□ 1.45
COPS7B-202ENST00000357490 UNC13BO14795 1591 aa24.08■■□□□ 1.45
COPS7B-202ENST00000357490 ARHGAP31Q2M1Z3 1444 aa24.08■■□□□ 1.44
COPS7B-202ENST00000357490 VWDEQ8N2E2 1590 aa24.08■■□□□ 1.44
COPS7B-202ENST00000357490 UBR1Q8IWV7 1749 aa24.07■■□□□ 1.44
COPS7B-202ENST00000357490 TRIM26Q12899 539 aaPredicted RBP24.07■■□□□ 1.44
COPS7B-202ENST00000357490 IQGAP1P46940 1657 aa24.07■■□□□ 1.44
COPS7B-202ENST00000357490 MED14O60244 1454 aa24.07■■□□□ 1.44
COPS7B-202ENST00000357490 SETD5Q9C0A6 1442 aa24.05■■□□□ 1.44
COPS7B-202ENST00000357490 CPS1P31327 1500 aa24.05■■□□□ 1.44
COPS7B-202ENST00000357490 NUP155O75694 1391 aa24.04■■□□□ 1.44
COPS7B-202ENST00000357490 NPHP4O75161 1426 aaPredicted RBP24.02■■□□□ 1.44
COPS7B-202ENST00000357490 LMTK2Q8IWU2 1503 aa24■■□□□ 1.43
COPS7B-202ENST00000357490 TRIM52Q96A61 297 aa24■■□□□ 1.43
COPS7B-202ENST00000357490 IQGAP3Q86VI3 1631 aa23.99■■□□□ 1.43
COPS7B-202ENST00000357490 UBAP1LF5GYI3 381 aa23.99■■□□□ 1.43
COPS7B-202ENST00000357490 RAB3GAP2Q9H2M9 1393 aa23.99■■□□□ 1.43
COPS7B-202ENST00000357490 KDM5AP29375 1690 aaKnown RBP23.98■■□□□ 1.43
COPS7B-202ENST00000357490 PIK3C2BO00750 1634 aa23.95■■□□□ 1.43
COPS7B-202ENST00000357490 TET3O43151 1660 aa23.95■■□□□ 1.42
COPS7B-202ENST00000357490 SLIT1O75093 1534 aa23.94■■□□□ 1.42
COPS7B-202ENST00000357490 EFCAB6Q5THR3 1501 aa23.94■■□□□ 1.42
COPS7B-202ENST00000357490 SCAF11Q99590 1463 aaKnown RBP23.94■■□□□ 1.42
COPS7B-202ENST00000357490 ARHGAP23Q9P227 1491 aa23.93■■□□□ 1.42
COPS7B-202ENST00000357490 STRCP1A6NGW2 1772 aa23.9■■□□□ 1.42
COPS7B-202ENST00000357490 SYNMO15061 1565 aa23.9■■□□□ 1.42
COPS7B-202ENST00000357490 E9PCH4 1651 aa23.89■■□□□ 1.42
COPS7B-202ENST00000357490 HRCP23327 699 aa23.88■■□□□ 1.41
COPS7B-202ENST00000357490 SLC4A1APQ9BWU0 796 aaKnown RBP23.88■■□□□ 1.41
COPS7B-202ENST00000357490 EID1Q9Y6B2 187 aa23.88■■□□□ 1.41
COPS7B-202ENST00000357490 DISP3Q9P2K9 1392 aa23.88■■□□□ 1.41
COPS7B-202ENST00000357490 TOM1O60784 492 aa23.87■■□□□ 1.41
COPS7B-202ENST00000357490 STAG3Q9UJ98 1225 aa23.87■■□□□ 1.41
COPS7B-202ENST00000357490 RPRD2Q5VT52 1461 aaKnown RBP23.87■■□□□ 1.41
COPS7B-202ENST00000357490 TXNDC2Q86VQ3 553 aa23.86■■□□□ 1.41
COPS7B-202ENST00000357490 ACIN1Q9UKV3 1341 aaKnown RBP23.85■■□□□ 1.41
COPS7B-202ENST00000357490 MPHOSPH9Q99550 1183 aa23.85■■□□□ 1.41
COPS7B-202ENST00000357490 NOS1P29475 1434 aa23.84■■□□□ 1.41
COPS7B-202ENST00000357490 TMEM2Q9UHN6 1383 aa23.84■■□□□ 1.41
COPS7B-202ENST00000357490 LTKP29376 864 aa23.83■■□□□ 1.41
COPS7B-202ENST00000357490 IDI1Q13907 227 aa23.82■■□□□ 1.4
COPS7B-202ENST00000357490 ADGRB3O60242 1522 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms