RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 MROH2AA6NES4 1674 aa16.14■□□□□ 0.18
LINC01560-201ENST00000357412 TNRQ92752 1358 aa16.14■□□□□ 0.17
LINC01560-201ENST00000357412 MAP3K1Q13233 1512 aa16.14■□□□□ 0.17
LINC01560-201ENST00000357412 MIA2Q96PC5 1412 aa16.13■□□□□ 0.17
LINC01560-201ENST00000357412 A2ML1A8K2U0 1454 aa16.13■□□□□ 0.17
LINC01560-201ENST00000357412 PZPP20742 1482 aa16.12■□□□□ 0.17
LINC01560-201ENST00000357412 MYOM3Q5VTT5 1437 aa16.11■□□□□ 0.17
LINC01560-201ENST00000357412 ARHGEF5Q12774 1597 aa16.11■□□□□ 0.17
LINC01560-201ENST00000357412 CEP170BQ9Y4F5 1589 aaPredicted RBP16.11■□□□□ 0.17
LINC01560-201ENST00000357412 CLTCQ00610 1675 aaKnown RBP16.11■□□□□ 0.17
LINC01560-201ENST00000357412 KDM5DQ9BY66 1539 aa16.1■□□□□ 0.17
LINC01560-201ENST00000357412 ADGBQ8N7X0 1667 aa16.1■□□□□ 0.17
LINC01560-201ENST00000357412 IQSEC2Q5JU85 1478 aa16.09■□□□□ 0.17
LINC01560-201ENST00000357412 FAM135AQ9P2D6 1515 aa16.09■□□□□ 0.17
LINC01560-201ENST00000357412 MYO3AQ8NEV4 1616 aa16.08■□□□□ 0.16
LINC01560-201ENST00000357412 THEMISQ8N1K5 641 aaPredicted RBP16.07■□□□□ 0.16
LINC01560-201ENST00000357412 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.06■□□□□ 0.16
LINC01560-201ENST00000357412 APLP2Q06481 763 aa16.06■□□□□ 0.16
LINC01560-201ENST00000357412 ANKLE2Q86XL3 938 aa16.06■□□□□ 0.16
LINC01560-201ENST00000357412 ABCC5O15440 1437 aa16.05■□□□□ 0.16
LINC01560-201ENST00000357412 UBAP1LF5GYI3 381 aa16.04■□□□□ 0.16
LINC01560-201ENST00000357412 RRP7BPQ9NSQ0 103 aa16.04■□□□□ 0.16
LINC01560-201ENST00000357412 NLRP1Q9C000 1473 aa16.03■□□□□ 0.16
LINC01560-201ENST00000357412 DNMT1P26358 1616 aaKnown RBP16.03■□□□□ 0.16
LINC01560-201ENST00000357412 MAST1Q9Y2H9 1570 aa16.03■□□□□ 0.16
LINC01560-201ENST00000357412 KIF15Q9NS87 1388 aa16.02■□□□□ 0.16
LINC01560-201ENST00000357412 ZNF142P52746 1687 aaPredicted RBP16.02■□□□□ 0.16
LINC01560-201ENST00000357412 ABCC3O15438 1527 aa16.02■□□□□ 0.15
LINC01560-201ENST00000357412 DISP3Q9P2K9 1392 aa16■□□□□ 0.15
LINC01560-201ENST00000357412 ERVK-7P63135 1459 aa15.98■□□□□ 0.15
LINC01560-201ENST00000357412 FGD6Q6ZV73 1430 aa15.98■□□□□ 0.15
LINC01560-201ENST00000357412 ILDR2Q71H61 639 aa15.98■□□□□ 0.15
LINC01560-201ENST00000357412 DUOX2Q9NRD8 1548 aa15.98■□□□□ 0.15
LINC01560-201ENST00000357412 SHANK2Q9UPX8 1470 aa15.97■□□□□ 0.15
LINC01560-201ENST00000357412 UGGT1Q9NYU2 1555 aa15.97■□□□□ 0.15
LINC01560-201ENST00000357412 NPHP4O75161 1426 aaPredicted RBP15.97■□□□□ 0.15
LINC01560-201ENST00000357412 DAPK1P53355 1430 aa15.97■□□□□ 0.15
LINC01560-201ENST00000357412 CHIC2Q9UKJ5 165 aa15.97■□□□□ 0.15
LINC01560-201ENST00000357412 MED14O60244 1454 aa15.97■□□□□ 0.15
LINC01560-201ENST00000357412 ERBINQ96RT1 1412 aa15.96■□□□□ 0.15
LINC01560-201ENST00000357412 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.96■□□□□ 0.15
LINC01560-201ENST00000357412 SPATA31D1Q6ZQQ2 1576 aa15.96■□□□□ 0.14
LINC01560-201ENST00000357412 NEURL4Q96JN8 1562 aa15.96■□□□□ 0.14
LINC01560-201ENST00000357412 ARHGAP31Q2M1Z3 1444 aa15.95■□□□□ 0.14
LINC01560-201ENST00000357412 RNF17Q9BXT8 1623 aaKnown RBP15.95■□□□□ 0.14
LINC01560-201ENST00000357412 MROH1Q8NDA8 1641 aa15.94■□□□□ 0.14
LINC01560-201ENST00000357412 ANKRD30AQ9BXX3 1397 aa15.93■□□□□ 0.14
LINC01560-201ENST00000357412 TOM1O60784 492 aa15.93■□□□□ 0.14
LINC01560-201ENST00000357412 LTKP29376 864 aa15.93■□□□□ 0.14
LINC01560-201ENST00000357412 CPS1P31327 1500 aa15.92■□□□□ 0.14
LINC01560-201ENST00000357412 PIP4K2BP78356 416 aa15.91■□□□□ 0.14
LINC01560-201ENST00000357412 EIF2AK4Q9P2K8 1649 aaKnown RBP15.9■□□□□ 0.14
LINC01560-201ENST00000357412 TXNDC2Q86VQ3 553 aa15.9■□□□□ 0.14
LINC01560-201ENST00000357412 KANK1Q14678 1352 aa15.89■□□□□ 0.13
LINC01560-201ENST00000357412 VWDEQ8N2E2 1590 aa15.89■□□□□ 0.13
LINC01560-201ENST00000357412 HSPA1LP34931 641 aa15.89■□□□□ 0.13
LINC01560-201ENST00000357412 PTPN23Q9H3S7 1636 aa15.89■□□□□ 0.13
LINC01560-201ENST00000357412 PRDM15P57071 1507 aaPredicted RBP15.89■□□□□ 0.13
LINC01560-201ENST00000357412 IDI1Q13907 227 aa15.88■□□□□ 0.13
LINC01560-201ENST00000357412 FAM50AQ14320 339 aaKnown RBP15.88■□□□□ 0.13
LINC01560-201ENST00000357412 SCAF1Q9H7N4 1312 aaKnown RBP15.88■□□□□ 0.13
LINC01560-201ENST00000357412 SCAF11Q99590 1463 aaKnown RBP15.86■□□□□ 0.13
LINC01560-201ENST00000357412 ARHGAP23Q9P227 1491 aa15.86■□□□□ 0.13
LINC01560-201ENST00000357412 EID1Q9Y6B2 187 aa15.86■□□□□ 0.13
LINC01560-201ENST00000357412 TMEM2Q9UHN6 1383 aa15.86■□□□□ 0.13
LINC01560-201ENST00000357412 ZC3H13Q5T200 1668 aaKnown RBP15.86■□□□□ 0.13
LINC01560-201ENST00000357412 LMTK2Q8IWU2 1503 aa15.85■□□□□ 0.13
LINC01560-201ENST00000357412 SOCS7O14512 581 aa15.85■□□□□ 0.13
LINC01560-201ENST00000357412 DEPDC5O75140 1603 aa15.85■□□□□ 0.13
LINC01560-201ENST00000357412 STAG3Q9UJ98 1225 aa15.84■□□□□ 0.13
LINC01560-201ENST00000357412 ADGRL2O95490 1459 aa15.84■□□□□ 0.13
LINC01560-201ENST00000357412 SLIT1O75093 1534 aa15.83■□□□□ 0.12
LINC01560-201ENST00000357412 LRRC7Q96NW7 1537 aa15.83■□□□□ 0.12
LINC01560-201ENST00000357412 NOS1P29475 1434 aa15.82■□□□□ 0.12
LINC01560-201ENST00000357412 ANKRD50Q9ULJ7 1429 aa15.82■□□□□ 0.12
LINC01560-201ENST00000357412 SLC52A1Q9NWF4 448 aa15.81■□□□□ 0.12
LINC01560-201ENST00000357412 ALKQ9UM73 1620 aa15.78■□□□□ 0.12
LINC01560-201ENST00000357412 POLR1AO95602 1720 aaPredicted RBP15.77■□□□□ 0.12
LINC01560-201ENST00000357412 IQGAP1P46940 1657 aa15.76■□□□□ 0.11
LINC01560-201ENST00000357412 KCNA6P17658 529 aa15.76■□□□□ 0.11
LINC01560-201ENST00000357412 SLC26A8Q96RN1 970 aa15.76■□□□□ 0.11
LINC01560-201ENST00000357412 CROCC2H7BZ55 1655 aa15.76■□□□□ 0.11
LINC01560-201ENST00000357412 CEP152O94986 1710 aa15.75■□□□□ 0.11
LINC01560-201ENST00000357412 UBR1Q8IWV7 1749 aa15.74■□□□□ 0.11
LINC01560-201ENST00000357412 EFCAB6Q5THR3 1501 aa15.74■□□□□ 0.11
LINC01560-201ENST00000357412 ROCK1Q13464 1354 aa15.74■□□□□ 0.11
LINC01560-201ENST00000357412 TMEM94Q12767 1356 aa15.73■□□□□ 0.11
LINC01560-201ENST00000357412 RPRD2Q5VT52 1461 aaKnown RBP15.72■□□□□ 0.11
LINC01560-201ENST00000357412 SYNMO15061 1565 aa15.72■□□□□ 0.11
LINC01560-201ENST00000357412 PPARGC1BQ86YN6 1023 aaKnown RBP15.71■□□□□ 0.11
LINC01560-201ENST00000357412 RBM33Q96EV2 1170 aaKnown RBP15.71■□□□□ 0.11
LINC01560-201ENST00000357412 PIK3C2BO00750 1634 aa15.71■□□□□ 0.11
LINC01560-201ENST00000357412 BCANQ96GW7 911 aa15.7■□□□□ 0.1
LINC01560-201ENST00000357412 ITGAEP38570 1179 aa15.69■□□□□ 0.1
LINC01560-201ENST00000357412 PROSER2Q86WR7 435 aaPredicted RBP15.69■□□□□ 0.1
LINC01560-201ENST00000357412 ZFYVE9O95405 1425 aa15.68■□□□□ 0.1
LINC01560-201ENST00000357412 TET3O43151 1660 aa15.68■□□□□ 0.1
LINC01560-201ENST00000357412 HDGFP51858 240 aaKnown RBP15.68■□□□□ 0.1
LINC01560-201ENST00000357412 ADGRB3O60242 1522 aa15.68■□□□□ 0.1
LINC01560-201ENST00000357412 FAM135BQ49AJ0 1406 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms