RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 COL17A1Q9UMD9 1497 aaPredicted RBP18.05■□□□□ 0.48
RTFDC1-202ENST00000357348 FRMPD1Q5SYB0 1578 aa18.05■□□□□ 0.48
RTFDC1-202ENST00000357348 NUP155O75694 1391 aa18.04■□□□□ 0.48
RTFDC1-202ENST00000357348 SIN3AQ96ST3 1273 aa18.04■□□□□ 0.48
RTFDC1-202ENST00000357348 YEATS2Q9ULM3 1422 aa18.02■□□□□ 0.47
RTFDC1-202ENST00000357348 KIF3BO15066 747 aa18.02■□□□□ 0.47
RTFDC1-202ENST00000357348 ABCA6Q8N139 1617 aa18.02■□□□□ 0.47
RTFDC1-202ENST00000357348 MLH3Q9UHC1 1453 aa18.02■□□□□ 0.47
RTFDC1-202ENST00000357348 ERBINQ96RT1 1412 aa18■□□□□ 0.47
RTFDC1-202ENST00000357348 PZPP20742 1482 aa17.99■□□□□ 0.47
RTFDC1-202ENST00000357348 DHX29Q7Z478 1369 aaKnown RBP17.98■□□□□ 0.47
RTFDC1-202ENST00000357348 A2MP01023 1474 aa17.98■□□□□ 0.47
RTFDC1-202ENST00000357348 PKD2Q13563 968 aa17.97■□□□□ 0.47
RTFDC1-202ENST00000357348 DIP2CQ9Y2E4 1556 aa17.96■□□□□ 0.47
RTFDC1-202ENST00000357348 GGT6Q6P531 493 aa17.95■□□□□ 0.46
RTFDC1-202ENST00000357348 TSHZ2Q9NRE2 1034 aa17.94■□□□□ 0.46
RTFDC1-202ENST00000357348 UNC13BO14795 1591 aa17.94■□□□□ 0.46
RTFDC1-202ENST00000357348 FAM135AQ9P2D6 1515 aa17.93■□□□□ 0.46
RTFDC1-202ENST00000357348 ZMYM4Q5VZL5 1548 aa17.92■□□□□ 0.46
RTFDC1-202ENST00000357348 KDM5DQ9BY66 1539 aa17.89■□□□□ 0.46
RTFDC1-202ENST00000357348 EIF2AK4Q9P2K8 1649 aaKnown RBP17.89■□□□□ 0.45
RTFDC1-202ENST00000357348 IQGAP3Q86VI3 1631 aa17.88■□□□□ 0.45
RTFDC1-202ENST00000357348 DEPDC5O75140 1603 aa17.87■□□□□ 0.45
RTFDC1-202ENST00000357348 MLECQ14165 292 aa17.87■□□□□ 0.45
RTFDC1-202ENST00000357348 MAGI2Q86UL8 1455 aa17.87■□□□□ 0.45
RTFDC1-202ENST00000357348 MROH1Q8NDA8 1641 aa17.86■□□□□ 0.45
RTFDC1-202ENST00000357348 ATP10AO60312 1499 aa17.86■□□□□ 0.45
RTFDC1-202ENST00000357348 SIGLEC1Q9BZZ2 1709 aa17.86■□□□□ 0.45
RTFDC1-202ENST00000357348 KANK1Q14678 1352 aa17.85■□□□□ 0.45
RTFDC1-202ENST00000357348 CFAP65Q6ZU64 1925 aaKnown RBP17.85■□□□□ 0.45
RTFDC1-202ENST00000357348 ANKRD30BQ9BXX2 1392 aa17.85■□□□□ 0.45
RTFDC1-202ENST00000357348 CEP152O94986 1710 aa17.84■□□□□ 0.45
RTFDC1-202ENST00000357348 TIMELESSQ9UNS1 1208 aa17.83■□□□□ 0.45
RTFDC1-202ENST00000357348 PRDM15P57071 1507 aaPredicted RBP17.83■□□□□ 0.44
RTFDC1-202ENST00000357348 ARHGEF40Q8TER5 1519 aa17.82■□□□□ 0.44
RTFDC1-202ENST00000357348 ARID4BQ4LE39 1312 aaPredicted RBP17.82■□□□□ 0.44
RTFDC1-202ENST00000357348 WASHC2CQ9Y4E1 1318 aa17.82■□□□□ 0.44
RTFDC1-202ENST00000357348 RNF17Q9BXT8 1623 aaKnown RBP17.81■□□□□ 0.44
RTFDC1-202ENST00000357348 E9PCH4 1651 aa17.81■□□□□ 0.44
RTFDC1-202ENST00000357348 TONSLQ96HA7 1378 aa17.81■□□□□ 0.44
RTFDC1-202ENST00000357348 ANP32EQ9BTT0 268 aa17.79■□□□□ 0.44
RTFDC1-202ENST00000357348 VWDEQ8N2E2 1590 aa17.79■□□□□ 0.44
RTFDC1-202ENST00000357348 BCORL1Q5H9F3 1711 aa17.78■□□□□ 0.44
RTFDC1-202ENST00000357348 TET3O43151 1660 aa17.77■□□□□ 0.44
RTFDC1-202ENST00000357348 PPP1R15AO75807 674 aaPredicted RBP17.77■□□□□ 0.44
RTFDC1-202ENST00000357348 RPRD2Q5VT52 1461 aaKnown RBP17.75■□□□□ 0.43
RTFDC1-202ENST00000357348 PLA2R1Q13018 1463 aa17.74■□□□□ 0.43
RTFDC1-202ENST00000357348 ABCC3O15438 1527 aa17.74■□□□□ 0.43
RTFDC1-202ENST00000357348 CCER2I3L3R5 266 aa17.73■□□□□ 0.43
RTFDC1-202ENST00000357348 L3MBTL2Q969R5 705 aa17.73■□□□□ 0.43
RTFDC1-202ENST00000357348 REREQ9P2R6 1566 aa17.73■□□□□ 0.43
RTFDC1-202ENST00000357348 CCDC144AA2RUR9 1427 aa17.72■□□□□ 0.43
RTFDC1-202ENST00000357348 EFCAB6Q5THR3 1501 aa17.72■□□□□ 0.43
RTFDC1-202ENST00000357348 RGL3Q3MIN7 710 aa17.72■□□□□ 0.43
RTFDC1-202ENST00000357348 SPHKAPQ2M3C7 1700 aa17.71■□□□□ 0.43
RTFDC1-202ENST00000357348 CAMSAP1Q5T5Y3 1602 aa17.71■□□□□ 0.43
RTFDC1-202ENST00000357348 AGLP35573 1532 aa17.71■□□□□ 0.43
RTFDC1-202ENST00000357348 NPATQ14207 1427 aa17.7■□□□□ 0.42
RTFDC1-202ENST00000357348 CLTCQ00610 1675 aaKnown RBP17.7■□□□□ 0.42
RTFDC1-202ENST00000357348 LMTK2Q8IWU2 1503 aa17.69■□□□□ 0.42
RTFDC1-202ENST00000357348 UGGT1Q9NYU2 1555 aa17.69■□□□□ 0.42
RTFDC1-202ENST00000357348 DDX10Q13206 875 aaKnown RBP17.68■□□□□ 0.42
RTFDC1-202ENST00000357348 ZNF326Q5BKZ1 582 aaKnown RBP17.68■□□□□ 0.42
RTFDC1-202ENST00000357348 PLPPR3Q6T4P5 718 aa17.68■□□□□ 0.42
RTFDC1-202ENST00000357348 ESF1Q9H501 851 aaKnown RBP17.68■□□□□ 0.42
RTFDC1-202ENST00000357348 KDM2AQ9Y2K7 1162 aa17.67■□□□□ 0.42
RTFDC1-202ENST00000357348 ZC3H13Q5T200 1668 aaKnown RBP17.66■□□□□ 0.42
RTFDC1-202ENST00000357348 FBXO31Q5XUX0 539 aaPredicted RBP17.66■□□□□ 0.42
RTFDC1-202ENST00000357348 FKBP8Q14318 412 aa17.65■□□□□ 0.42
RTFDC1-202ENST00000357348 CLTCL1P53675 1640 aa17.65■□□□□ 0.42
RTFDC1-202ENST00000357348 TRPM2O94759 1503 aa17.64■□□□□ 0.41
RTFDC1-202ENST00000357348 CHGAP10645 457 aaKnown RBP17.64■□□□□ 0.41
RTFDC1-202ENST00000357348 DCAF11Q8TEB1 546 aa17.64■□□□□ 0.41
RTFDC1-202ENST00000357348 PTPRTO14522 1441 aa17.64■□□□□ 0.41
RTFDC1-202ENST00000357348 NBPF8Q3BBV2 869 aa17.6■□□□□ 0.41
RTFDC1-202ENST00000357348 PREX1Q8TCU6 1659 aa17.59■□□□□ 0.41
RTFDC1-202ENST00000357348 CEBPAP49715 358 aaPredicted RBP17.59■□□□□ 0.41
RTFDC1-202ENST00000357348 HIRIP3Q9BW71 556 aaPredicted RBP17.58■□□□□ 0.4
RTFDC1-202ENST00000357348 PPP6R1Q9UPN7 881 aa17.58■□□□□ 0.4
RTFDC1-202ENST00000357348 ZMYM3Q14202 1370 aa17.58■□□□□ 0.4
RTFDC1-202ENST00000357348 KIF1BO60333 1816 aa17.57■□□□□ 0.4
RTFDC1-202ENST00000357348 SYNMO15061 1565 aa17.57■□□□□ 0.4
RTFDC1-202ENST00000357348 ARHGAP31Q2M1Z3 1444 aa17.57■□□□□ 0.4
RTFDC1-202ENST00000357348 BCANQ96GW7 911 aa17.57■□□□□ 0.4
RTFDC1-202ENST00000357348 ANP32CO43423 234 aa17.56■□□□□ 0.4
RTFDC1-202ENST00000357348 NOS1P29475 1434 aa17.56■□□□□ 0.4
RTFDC1-202ENST00000357348 CNTLNQ9NXG0 1405 aa17.56■□□□□ 0.4
RTFDC1-202ENST00000357348 MROH2AA6NES4 1674 aa17.55■□□□□ 0.4
RTFDC1-202ENST00000357348 NEFLP07196 543 aa17.55■□□□□ 0.4
RTFDC1-202ENST00000357348 IDI1Q13907 227 aa17.55■□□□□ 0.4
RTFDC1-202ENST00000357348 FER1L4A9Z1Z3 1794 aa17.55■□□□□ 0.4
RTFDC1-202ENST00000357348 SPATA31E1Q6ZUB1 1445 aa17.55■□□□□ 0.4
RTFDC1-202ENST00000357348 SENP3Q9H4L4 574 aaPredicted RBP17.54■□□□□ 0.4
RTFDC1-202ENST00000357348 RBM19Q9Y4C8 960 aaKnown RBP17.53■□□□□ 0.4
RTFDC1-202ENST00000357348 ERVK-7P63135 1459 aa17.53■□□□□ 0.4
RTFDC1-202ENST00000357348 NUTM2DQ5VT03 806 aaPredicted RBP17.52■□□□□ 0.4
RTFDC1-202ENST00000357348 MYO5BQ9ULV0 1848 aa17.51■□□□□ 0.39
RTFDC1-202ENST00000357348 STAG3Q9UJ98 1225 aa17.49■□□□□ 0.39
RTFDC1-202ENST00000357348 PIK3C2BO00750 1634 aa17.49■□□□□ 0.39
RTFDC1-202ENST00000357348 MADDQ8WXG6 1647 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms