RNA–Protein interactions for RNA: ENST00000356205.8

SLC39A1-202, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-202ENST00000356205 TSPOAP1O95153 1857 aa23.5■■□□□ 1.35
SLC39A1-202ENST00000356205 RICTORQ6R327 1708 aa23.5■■□□□ 1.35
SLC39A1-202ENST00000356205 ANKRD30BQ9BXX2 1392 aa23.49■■□□□ 1.35
SLC39A1-202ENST00000356205 IQGAP3Q86VI3 1631 aa23.48■■□□□ 1.35
SLC39A1-202ENST00000356205 EIF2AK4Q9P2K8 1649 aaKnown RBP23.48■■□□□ 1.35
SLC39A1-202ENST00000356205 FOXD1Q16676 465 aa23.48■■□□□ 1.35
SLC39A1-202ENST00000356205 DHX29Q7Z478 1369 aaKnown RBP23.47■■□□□ 1.35
SLC39A1-202ENST00000356205 PKD2Q13563 968 aa23.46■■□□□ 1.35
SLC39A1-202ENST00000356205 DEPDC5O75140 1603 aa23.45■■□□□ 1.34
SLC39A1-202ENST00000356205 FRMPD1Q5SYB0 1578 aa23.45■■□□□ 1.34
SLC39A1-202ENST00000356205 TONSLQ96HA7 1378 aa23.45■■□□□ 1.34
SLC39A1-202ENST00000356205 RAPGEF3O95398 923 aa23.44■■□□□ 1.34
SLC39A1-202ENST00000356205 GTF3C3Q9Y5Q9 886 aa23.44■■□□□ 1.34
SLC39A1-202ENST00000356205 A2MP01023 1474 aa23.43■■□□□ 1.34
SLC39A1-202ENST00000356205 ABCA6Q8N139 1617 aa23.43■■□□□ 1.34
SLC39A1-202ENST00000356205 ZMYM4Q5VZL5 1548 aa23.42■■□□□ 1.34
SLC39A1-202ENST00000356205 RPRD2Q5VT52 1461 aaKnown RBP23.41■■□□□ 1.34
SLC39A1-202ENST00000356205 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.4■■□□□ 1.34
SLC39A1-202ENST00000356205 DIP2CQ9Y2E4 1556 aa23.39■■□□□ 1.33
SLC39A1-202ENST00000356205 PRDM15P57071 1507 aaPredicted RBP23.38■■□□□ 1.33
SLC39A1-202ENST00000356205 VWDEQ8N2E2 1590 aa23.35■■□□□ 1.33
SLC39A1-202ENST00000356205 MROH1Q8NDA8 1641 aa23.35■■□□□ 1.33
SLC39A1-202ENST00000356205 RNF17Q9BXT8 1623 aaKnown RBP23.35■■□□□ 1.33
SLC39A1-202ENST00000356205 KIF3BO15066 747 aa23.35■■□□□ 1.33
SLC39A1-202ENST00000356205 BCORL1Q5H9F3 1711 aa23.35■■□□□ 1.33
SLC39A1-202ENST00000356205 KANK1Q14678 1352 aa23.34■■□□□ 1.33
SLC39A1-202ENST00000356205 PPP1R15AO75807 674 aaPredicted RBP23.32■■□□□ 1.32
SLC39A1-202ENST00000356205 YEATS2Q9ULM3 1422 aa23.32■■□□□ 1.32
SLC39A1-202ENST00000356205 TET3O43151 1660 aa23.3■■□□□ 1.32
SLC39A1-202ENST00000356205 MIER1Q8N108 512 aa23.29■■□□□ 1.32
SLC39A1-202ENST00000356205 ATP10AO60312 1499 aa23.26■■□□□ 1.31
SLC39A1-202ENST00000356205 LMTK2Q8IWU2 1503 aa23.26■■□□□ 1.31
SLC39A1-202ENST00000356205 COL17A1Q9UMD9 1497 aaPredicted RBP23.25■■□□□ 1.31
SLC39A1-202ENST00000356205 E9PCH4 1651 aa23.25■■□□□ 1.31
SLC39A1-202ENST00000356205 PLA2R1Q13018 1463 aa23.24■■□□□ 1.31
SLC39A1-202ENST00000356205 REREQ9P2R6 1566 aa23.24■■□□□ 1.31
SLC39A1-202ENST00000356205 L3MBTL2Q969R5 705 aa23.23■■□□□ 1.31
SLC39A1-202ENST00000356205 CCDC144AA2RUR9 1427 aa23.23■■□□□ 1.31
SLC39A1-202ENST00000356205 EFCAB6Q5THR3 1501 aa23.22■■□□□ 1.31
SLC39A1-202ENST00000356205 ARHGEF40Q8TER5 1519 aa23.21■■□□□ 1.31
SLC39A1-202ENST00000356205 TRPM2O94759 1503 aa23.18■■□□□ 1.3
SLC39A1-202ENST00000356205 CEP152O94986 1710 aa23.18■■□□□ 1.3
SLC39A1-202ENST00000356205 PTPRTO14522 1441 aa23.17■■□□□ 1.3
SLC39A1-202ENST00000356205 ABCC3O15438 1527 aa23.17■■□□□ 1.3
SLC39A1-202ENST00000356205 SPHKAPQ2M3C7 1700 aa23.17■■□□□ 1.3
SLC39A1-202ENST00000356205 GGT6Q6P531 493 aa23.17■■□□□ 1.3
SLC39A1-202ENST00000356205 AGLP35573 1532 aa23.16■■□□□ 1.3
SLC39A1-202ENST00000356205 ZC3H13Q5T200 1668 aaKnown RBP23.14■■□□□ 1.29
SLC39A1-202ENST00000356205 CAMSAP1Q5T5Y3 1602 aa23.1■■□□□ 1.29
SLC39A1-202ENST00000356205 WASHC2CQ9Y4E1 1318 aa23.1■■□□□ 1.29
SLC39A1-202ENST00000356205 NPATQ14207 1427 aa23.08■■□□□ 1.29
SLC39A1-202ENST00000356205 CLTCL1P53675 1640 aa23.08■■□□□ 1.29
SLC39A1-202ENST00000356205 YTHDC1Q96MU7 727 aaKnown RBP23.07■■□□□ 1.28
SLC39A1-202ENST00000356205 UHRF1BP1Q6BDS2 1440 aa23.06■■□□□ 1.28
SLC39A1-202ENST00000356205 SIGLEC1Q9BZZ2 1709 aa23.05■■□□□ 1.28
SLC39A1-202ENST00000356205 NBPF8Q3BBV2 869 aa23.04■■□□□ 1.28
SLC39A1-202ENST00000356205 ARHGAP31Q2M1Z3 1444 aa23.04■■□□□ 1.28
SLC39A1-202ENST00000356205 SPATA31E1Q6ZUB1 1445 aa23.04■■□□□ 1.28
SLC39A1-202ENST00000356205 NEURL4Q96JN8 1562 aa23.02■■□□□ 1.28
SLC39A1-202ENST00000356205 CNTLNQ9NXG0 1405 aa23.02■■□□□ 1.28
SLC39A1-202ENST00000356205 PPP6R1Q9UPN7 881 aa23.01■■□□□ 1.27
SLC39A1-202ENST00000356205 DCAF11Q8TEB1 546 aa22.99■■□□□ 1.27
SLC39A1-202ENST00000356205 UGGT1Q9NYU2 1555 aa22.99■■□□□ 1.27
SLC39A1-202ENST00000356205 NOS1P29475 1434 aa22.98■■□□□ 1.27
SLC39A1-202ENST00000356205 RALGAPBQ86X10 1494 aa22.98■■□□□ 1.27
SLC39A1-202ENST00000356205 RGL3Q3MIN7 710 aa22.97■■□□□ 1.27
SLC39A1-202ENST00000356205 ZNF326Q5BKZ1 582 aaKnown RBP22.96■■□□□ 1.27
SLC39A1-202ENST00000356205 PRAG1Q86YV5 1406 aa22.95■■□□□ 1.26
SLC39A1-202ENST00000356205 KDM2AQ9Y2K7 1162 aa22.94■■□□□ 1.26
SLC39A1-202ENST00000356205 KIF1BO60333 1816 aa22.93■■□□□ 1.26
SLC39A1-202ENST00000356205 SYNMO15061 1565 aa22.93■■□□□ 1.26
SLC39A1-202ENST00000356205 CLTCQ00610 1675 aaKnown RBP22.92■■□□□ 1.26
SLC39A1-202ENST00000356205 ADGRB3O60242 1522 aa22.92■■□□□ 1.26
SLC39A1-202ENST00000356205 PIK3C2BO00750 1634 aa22.91■■□□□ 1.26
SLC39A1-202ENST00000356205 EIF4G2P78344 907 aaKnown RBP eCLIP22.91■■□□□ 1.26
SLC39A1-202ENST00000356205 PREX1Q8TCU6 1659 aa22.9■■□□□ 1.26
SLC39A1-202ENST00000356205 TRPM1Q7Z4N2 1603 aa22.89■■□□□ 1.25
SLC39A1-202ENST00000356205 MROH2AA6NES4 1674 aa22.89■■□□□ 1.25
SLC39A1-202ENST00000356205 HSPA5P11021 654 aaKnown RBP22.88■■□□□ 1.25
SLC39A1-202ENST00000356205 MLECQ14165 292 aa22.88■■□□□ 1.25
SLC39A1-202ENST00000356205 STAC3Q96MF2 364 aa22.88■■□□□ 1.25
SLC39A1-202ENST00000356205 ERVK-7P63135 1459 aa22.87■■□□□ 1.25
SLC39A1-202ENST00000356205 ARID4BQ4LE39 1312 aaPredicted RBP22.86■■□□□ 1.25
SLC39A1-202ENST00000356205 HIRIP3Q9BW71 556 aaPredicted RBP22.86■■□□□ 1.25
SLC39A1-202ENST00000356205 MADDQ8WXG6 1647 aa22.86■■□□□ 1.25
SLC39A1-202ENST00000356205 CFAP65Q6ZU64 1925 aaKnown RBP22.86■■□□□ 1.25
SLC39A1-202ENST00000356205 MYOM2P54296 1465 aa22.84■■□□□ 1.25
SLC39A1-202ENST00000356205 MYT1Q01538 1121 aa22.84■■□□□ 1.25
SLC39A1-202ENST00000356205 IFT172Q9UG01 1749 aa22.83■■□□□ 1.25
SLC39A1-202ENST00000356205 ROCK2O75116 1388 aaKnown RBP22.83■■□□□ 1.25
SLC39A1-202ENST00000356205 ESF1Q9H501 851 aaKnown RBP22.82■■□□□ 1.24
SLC39A1-202ENST00000356205 SLC52A1Q9NWF4 448 aa22.82■■□□□ 1.24
SLC39A1-202ENST00000356205 USP47Q96K76 1375 aa22.82■■□□□ 1.24
SLC39A1-202ENST00000356205 SPATA31D1Q6ZQQ2 1576 aa22.82■■□□□ 1.24
SLC39A1-202ENST00000356205 LAMC1P11047 1609 aa22.81■■□□□ 1.24
SLC39A1-202ENST00000356205 GPRASP1Q5JY77 1395 aa22.81■■□□□ 1.24
SLC39A1-202ENST00000356205 CARD11Q9BXL7 1154 aa22.8■■□□□ 1.24
SLC39A1-202ENST00000356205 CHGAP10645 457 aaKnown RBP22.78■■□□□ 1.24
SLC39A1-202ENST00000356205 FBXO31Q5XUX0 539 aaPredicted RBP22.78■■□□□ 1.24
SLC39A1-202ENST00000356205 ZMYM3Q14202 1370 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms