RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 DNMT1P26358 1616 aaKnown RBP17.57■□□□□ 0.4
NCDN-201ENST00000356090 BACH2Q9BYV9 841 aa17.56■□□□□ 0.4
NCDN-201ENST00000356090 C20orf194Q5TEA3 1177 aa17.55■□□□□ 0.4
NCDN-201ENST00000356090 KIF21AQ7Z4S6 1674 aa17.55■□□□□ 0.4
NCDN-201ENST00000356090 GPATCH8Q9UKJ3 1502 aaKnown RBP17.54■□□□□ 0.4
NCDN-201ENST00000356090 PDE3BQ13370 1112 aa17.53■□□□□ 0.4
NCDN-201ENST00000356090 C9orf84Q5VXU9 1444 aa17.52■□□□□ 0.4
NCDN-201ENST00000356090 KNSTRNQ9Y448 316 aa17.52■□□□□ 0.4
NCDN-201ENST00000356090 KIAA0586Q9BVV6 1533 aa17.52■□□□□ 0.4
NCDN-201ENST00000356090 PPM1GO15355 546 aaPredicted RBP17.52■□□□□ 0.39
NCDN-201ENST00000356090 TMF1P82094 1093 aa17.52■□□□□ 0.39
NCDN-201ENST00000356090 ADAMTS8Q9UP79 889 aa17.51■□□□□ 0.39
NCDN-201ENST00000356090 CCDC146Q8IYE0 955 aa17.51■□□□□ 0.39
NCDN-201ENST00000356090 CCDC144AA2RUR9 1427 aa17.51■□□□□ 0.39
NCDN-201ENST00000356090 DISP1Q96F81 1524 aa17.5■□□□□ 0.39
NCDN-201ENST00000356090 ANO8Q9HCE9 1232 aaPredicted RBP17.5■□□□□ 0.39
NCDN-201ENST00000356090 ADAMTS12P58397 1594 aa17.5■□□□□ 0.39
NCDN-201ENST00000356090 TARBP1Q13395 1621 aaKnown RBP17.5■□□□□ 0.39
NCDN-201ENST00000356090 LRPPRCP42704 1394 aaKnown RBP17.49■□□□□ 0.39
NCDN-201ENST00000356090 DDRGK1Q96HY6 314 aa17.49■□□□□ 0.39
NCDN-201ENST00000356090 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.49■□□□□ 0.39
NCDN-201ENST00000356090 CANXP27824 592 aaKnown RBP17.48■□□□□ 0.39
NCDN-201ENST00000356090 CARMIL2Q6F5E8 1435 aa17.48■□□□□ 0.39
NCDN-201ENST00000356090 RAPGEF6Q8TEU7 1601 aa17.48■□□□□ 0.39
NCDN-201ENST00000356090 RALGAPBQ86X10 1494 aa17.47■□□□□ 0.39
NCDN-201ENST00000356090 PBRM1Q86U86 1689 aa17.47■□□□□ 0.39
NCDN-201ENST00000356090 MS4A1P11836 297 aa17.47■□□□□ 0.39
NCDN-201ENST00000356090 KIAA0556O60303 1618 aa17.46■□□□□ 0.39
NCDN-201ENST00000356090 KDM5CP41229 1560 aa17.46■□□□□ 0.39
NCDN-201ENST00000356090 MBD5Q9P267 1494 aa17.45■□□□□ 0.38
NCDN-201ENST00000356090 KIF14Q15058 1648 aa17.45■□□□□ 0.38
NCDN-201ENST00000356090 MRC2Q9UBG0 1479 aa17.44■□□□□ 0.38
NCDN-201ENST00000356090 NEUROD2Q15784 382 aa17.44■□□□□ 0.38
NCDN-201ENST00000356090 DISP3Q9P2K9 1392 aa17.44■□□□□ 0.38
NCDN-201ENST00000356090 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.43■□□□□ 0.38
NCDN-201ENST00000356090 ARXQ96QS3 562 aa17.43■□□□□ 0.38
NCDN-201ENST00000356090 PER1O15534 1290 aaPredicted RBP17.42■□□□□ 0.38
NCDN-201ENST00000356090 GRIN2AQ12879 1464 aa17.42■□□□□ 0.38
NCDN-201ENST00000356090 BRPF3Q9ULD4 1205 aa17.41■□□□□ 0.38
NCDN-201ENST00000356090 TNNT2P45379 298 aaPredicted RBP17.4■□□□□ 0.38
NCDN-201ENST00000356090 GOLGA2Q08379 1002 aa17.4■□□□□ 0.38
NCDN-201ENST00000356090 PARD3Q8TEW0 1356 aa17.4■□□□□ 0.38
NCDN-201ENST00000356090 EIF5BO60841 1220 aaKnown RBP17.4■□□□□ 0.38
NCDN-201ENST00000356090 NFKBIBQ15653 356 aa17.4■□□□□ 0.38
NCDN-201ENST00000356090 ERCC6Q03468 1493 aa17.39■□□□□ 0.37
NCDN-201ENST00000356090 UHRF1BP1Q6BDS2 1440 aa17.39■□□□□ 0.37
NCDN-201ENST00000356090 USP35Q9P2H5 1018 aa17.38■□□□□ 0.37
NCDN-201ENST00000356090 FRAT1Q92837 279 aaPredicted RBP17.38■□□□□ 0.37
NCDN-201ENST00000356090 APAF1O14727 1248 aa17.37■□□□□ 0.37
NCDN-201ENST00000356090 IFT140Q96RY7 1462 aa17.37■□□□□ 0.37
NCDN-201ENST00000356090 PPP2R1AP30153 589 aa17.36■□□□□ 0.37
NCDN-201ENST00000356090 CENPQQ7L2Z9 268 aaPredicted RBP17.36■□□□□ 0.37
NCDN-201ENST00000356090 TESK2Q96S53 571 aa17.36■□□□□ 0.37
NCDN-201ENST00000356090 POLR1AO95602 1720 aaPredicted RBP17.36■□□□□ 0.37
NCDN-201ENST00000356090 GSE1Q14687 1217 aa17.35■□□□□ 0.37
NCDN-201ENST00000356090 SENP3Q9H4L4 574 aaPredicted RBP17.35■□□□□ 0.37
NCDN-201ENST00000356090 FAM161AQ3B820 660 aa17.35■□□□□ 0.37
NCDN-201ENST00000356090 MAGI1Q96QZ7 1491 aaPredicted RBP17.34■□□□□ 0.37
NCDN-201ENST00000356090 ADGRL2O95490 1459 aa17.34■□□□□ 0.37
NCDN-201ENST00000356090 ERBINQ96RT1 1412 aa17.34■□□□□ 0.37
NCDN-201ENST00000356090 BCAR3O75815 825 aa17.34■□□□□ 0.37
NCDN-201ENST00000356090 ITSN2Q9NZM3 1697 aa17.33■□□□□ 0.36
NCDN-201ENST00000356090 CHGAP10645 457 aaKnown RBP17.33■□□□□ 0.36
NCDN-201ENST00000356090 PRAG1Q86YV5 1406 aa17.33■□□□□ 0.36
NCDN-201ENST00000356090 SLKQ9H2G2 1235 aaPredicted RBP17.32■□□□□ 0.36
NCDN-201ENST00000356090 FRAT2O75474 233 aaPredicted RBP17.31■□□□□ 0.36
NCDN-201ENST00000356090 DUSP27Q5VZP5 1158 aa17.31■□□□□ 0.36
NCDN-201ENST00000356090 SLC24A1O60721 1099 aa17.3■□□□□ 0.36
NCDN-201ENST00000356090 ATP10BO94823 1461 aa17.3■□□□□ 0.36
NCDN-201ENST00000356090 RRP7AQ9Y3A4 280 aaKnown RBP17.3■□□□□ 0.36
NCDN-201ENST00000356090 PLEKHH1Q9ULM0 1364 aa17.3■□□□□ 0.36
NCDN-201ENST00000356090 PTPRGP23470 1445 aa17.3■□□□□ 0.36
NCDN-201ENST00000356090 ADGBQ8N7X0 1667 aa17.3■□□□□ 0.36
NCDN-201ENST00000356090 ARHGEF12Q9NZN5 1544 aa17.3■□□□□ 0.36
NCDN-201ENST00000356090 COG6Q9Y2V7 657 aa17.28■□□□□ 0.36
NCDN-201ENST00000356090 BCL2L13Q9BXK5 485 aa17.28■□□□□ 0.36
NCDN-201ENST00000356090 SPRYD3Q8NCJ5 442 aa17.28■□□□□ 0.36
NCDN-201ENST00000356090 WASHC2CQ9Y4E1 1318 aa17.27■□□□□ 0.36
NCDN-201ENST00000356090 CDCA8Q53HL2 280 aa17.27■□□□□ 0.36
NCDN-201ENST00000356090 FAM135AQ9P2D6 1515 aa17.27■□□□□ 0.35
NCDN-201ENST00000356090 PANK1Q8TE04 598 aa17.26■□□□□ 0.35
NCDN-201ENST00000356090 CLUAP1Q96AJ1 413 aa17.26■□□□□ 0.35
NCDN-201ENST00000356090 SPINK5Q9NQ38 1064 aaPredicted RBP17.26■□□□□ 0.35
NCDN-201ENST00000356090 RSPH4AQ5TD94 716 aa17.25■□□□□ 0.35
NCDN-201ENST00000356090 CCDC141Q6ZP82 1450 aa17.24■□□□□ 0.35
NCDN-201ENST00000356090 C8orf34Q49A92 452 aa17.24■□□□□ 0.35
NCDN-201ENST00000356090 PLEKHH2Q8IVE3 1493 aa17.24■□□□□ 0.35
NCDN-201ENST00000356090 A2MP01023 1474 aa17.23■□□□□ 0.35
NCDN-201ENST00000356090 SLFN5Q08AF3 891 aa17.22■□□□□ 0.35
NCDN-201ENST00000356090 ARHGAP5Q13017 1502 aa17.22■□□□□ 0.35
NCDN-201ENST00000356090 COL17A1Q9UMD9 1497 aaPredicted RBP17.22■□□□□ 0.35
NCDN-201ENST00000356090 EIF4G3O43432 1585 aaKnown RBP17.21■□□□□ 0.35
NCDN-201ENST00000356090 SYNJ2O15056 1496 aa17.21■□□□□ 0.35
NCDN-201ENST00000356090 KDM2BQ8NHM5 1336 aa17.21■□□□□ 0.35
NCDN-201ENST00000356090 AMER1Q5JTC6 1135 aaPredicted RBP17.2■□□□□ 0.34
NCDN-201ENST00000356090 CEP170Q5SW79 1584 aa17.2■□□□□ 0.34
NCDN-201ENST00000356090 IGHDP01880 384 aa17.19■□□□□ 0.34
NCDN-201ENST00000356090 CENPJQ9HC77 1338 aaPredicted RBP17.19■□□□□ 0.34
NCDN-201ENST00000356090 UPF2Q9HAU5 1272 aaKnown RBP17.19■□□□□ 0.34
NCDN-201ENST00000356090 DMRT2Q9Y5R5 561 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms