RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 SETD5Q9C0A6 1442 aa23.24■■□□□ 1.31
TRIM13-201ENST00000356017 ACIN1Q9UKV3 1341 aaKnown RBP23.24■■□□□ 1.31
TRIM13-201ENST00000356017 WASHC2CQ9Y4E1 1318 aa23.23■■□□□ 1.31
TRIM13-201ENST00000356017 KANK1Q14678 1352 aa23.23■■□□□ 1.31
TRIM13-201ENST00000356017 ADAMTSL3P82987 1691 aa23.23■■□□□ 1.31
TRIM13-201ENST00000356017 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.22■■□□□ 1.31
TRIM13-201ENST00000356017 FAM135AQ9P2D6 1515 aa23.22■■□□□ 1.31
TRIM13-201ENST00000356017 KDM4FA0A1W2PPD8 638 aa23.22■■□□□ 1.31
TRIM13-201ENST00000356017 CNTLNQ9NXG0 1405 aa23.22■■□□□ 1.31
TRIM13-201ENST00000356017 DEPDC5O75140 1603 aa23.2■■□□□ 1.3
TRIM13-201ENST00000356017 PRDM15P57071 1507 aaPredicted RBP23.2■■□□□ 1.3
TRIM13-201ENST00000356017 MROH1Q8NDA8 1641 aa23.18■■□□□ 1.3
TRIM13-201ENST00000356017 KDM5DQ9BY66 1539 aa23.18■■□□□ 1.3
TRIM13-201ENST00000356017 MADDQ8WXG6 1647 aa23.17■■□□□ 1.3
TRIM13-201ENST00000356017 HRCP23327 699 aa23.16■■□□□ 1.3
TRIM13-201ENST00000356017 FER1L4A9Z1Z3 1794 aa23.16■■□□□ 1.3
TRIM13-201ENST00000356017 UNC13BO14795 1591 aa23.16■■□□□ 1.3
TRIM13-201ENST00000356017 NUP155O75694 1391 aa23.16■■□□□ 1.3
TRIM13-201ENST00000356017 RAB3GAP2Q9H2M9 1393 aa23.15■■□□□ 1.3
TRIM13-201ENST00000356017 TRIM52Q96A61 297 aa23.14■■□□□ 1.29
TRIM13-201ENST00000356017 VWDEQ8N2E2 1590 aa23.13■■□□□ 1.29
TRIM13-201ENST00000356017 ZC3H13Q5T200 1668 aaKnown RBP23.13■■□□□ 1.29
TRIM13-201ENST00000356017 ABCC3O15438 1527 aa23.12■■□□□ 1.29
TRIM13-201ENST00000356017 ZMYM3Q14202 1370 aa23.12■■□□□ 1.29
TRIM13-201ENST00000356017 LMTK2Q8IWU2 1503 aa23.1■■□□□ 1.29
TRIM13-201ENST00000356017 CLTCQ00610 1675 aaKnown RBP23.1■■□□□ 1.29
TRIM13-201ENST00000356017 RIMS1Q86UR5 1692 aaKnown RBP23.1■■□□□ 1.29
TRIM13-201ENST00000356017 PTPRMP28827 1452 aa23.1■■□□□ 1.29
TRIM13-201ENST00000356017 PCGF6Q9BYE7 350 aa23.09■■□□□ 1.29
TRIM13-201ENST00000356017 MROH2AA6NES4 1674 aa23.09■■□□□ 1.29
TRIM13-201ENST00000356017 IQGAP3Q86VI3 1631 aa23.07■■□□□ 1.28
TRIM13-201ENST00000356017 ARHGAP31Q2M1Z3 1444 aa23.05■■□□□ 1.28
TRIM13-201ENST00000356017 CEBPAP49715 358 aaPredicted RBP23.04■■□□□ 1.28
TRIM13-201ENST00000356017 CEP152O94986 1710 aa23.04■■□□□ 1.28
TRIM13-201ENST00000356017 SLC4A1APQ9BWU0 796 aaKnown RBP23.04■■□□□ 1.28
TRIM13-201ENST00000356017 PZPP20742 1482 aa23.03■■□□□ 1.28
TRIM13-201ENST00000356017 CAMSAP1Q5T5Y3 1602 aa23.02■■□□□ 1.28
TRIM13-201ENST00000356017 PLPPR3Q6T4P5 718 aa23.02■■□□□ 1.28
TRIM13-201ENST00000356017 TET3O43151 1660 aa23.02■■□□□ 1.28
TRIM13-201ENST00000356017 EFCAB6Q5THR3 1501 aa23.01■■□□□ 1.27
TRIM13-201ENST00000356017 RPRD2Q5VT52 1461 aaKnown RBP23.01■■□□□ 1.27
TRIM13-201ENST00000356017 NPATQ14207 1427 aa23.01■■□□□ 1.27
TRIM13-201ENST00000356017 C3P01024 1663 aa23■■□□□ 1.27
TRIM13-201ENST00000356017 MPHOSPH9Q99550 1183 aa23■■□□□ 1.27
TRIM13-201ENST00000356017 FBXO31Q5XUX0 539 aaPredicted RBP22.97■■□□□ 1.27
TRIM13-201ENST00000356017 PKD2Q13563 968 aa22.97■■□□□ 1.27
TRIM13-201ENST00000356017 AEBP2Q6ZN18 517 aaPredicted RBP22.93■■□□□ 1.26
TRIM13-201ENST00000356017 ERVK-7P63135 1459 aa22.93■■□□□ 1.26
TRIM13-201ENST00000356017 TNRQ92752 1358 aa22.92■■□□□ 1.26
TRIM13-201ENST00000356017 SPATA31D1Q6ZQQ2 1576 aa22.92■■□□□ 1.26
TRIM13-201ENST00000356017 E9PCH4 1651 aa22.91■■□□□ 1.26
TRIM13-201ENST00000356017 NOS1P29475 1434 aa22.9■■□□□ 1.26
TRIM13-201ENST00000356017 PREX1Q8TCU6 1659 aa22.88■■□□□ 1.25
TRIM13-201ENST00000356017 SLC52A1Q9NWF4 448 aa22.87■■□□□ 1.25
TRIM13-201ENST00000356017 SETD1BQ9UPS6 1966 aaKnown RBP22.87■■□□□ 1.25
TRIM13-201ENST00000356017 PTPRTO14522 1441 aa22.86■■□□□ 1.25
TRIM13-201ENST00000356017 NLRP1Q9C000 1473 aa22.85■■□□□ 1.25
TRIM13-201ENST00000356017 FOXD1Q16676 465 aa22.85■■□□□ 1.25
TRIM13-201ENST00000356017 UHRF1BP1Q6BDS2 1440 aa22.84■■□□□ 1.25
TRIM13-201ENST00000356017 CFAP65Q6ZU64 1925 aaKnown RBP22.83■■□□□ 1.25
TRIM13-201ENST00000356017 IDI1Q13907 227 aa22.81■■□□□ 1.24
TRIM13-201ENST00000356017 SYNMO15061 1565 aa22.8■■□□□ 1.24
TRIM13-201ENST00000356017 SPHKAPQ2M3C7 1700 aa22.79■■□□□ 1.24
TRIM13-201ENST00000356017 TRPM2O94759 1503 aa22.79■■□□□ 1.24
TRIM13-201ENST00000356017 MYO3AQ8NEV4 1616 aa22.78■■□□□ 1.24
TRIM13-201ENST00000356017 A2ML1A8K2U0 1454 aa22.78■■□□□ 1.24
TRIM13-201ENST00000356017 PLA2R1Q13018 1463 aa22.78■■□□□ 1.24
TRIM13-201ENST00000356017 DHX57Q6P158 1386 aaKnown RBP22.77■■□□□ 1.24
TRIM13-201ENST00000356017 STAG3Q9UJ98 1225 aa22.76■■□□□ 1.23
TRIM13-201ENST00000356017 ANKRD30BQ9BXX2 1392 aa22.76■■□□□ 1.23
TRIM13-201ENST00000356017 CCDC144AA2RUR9 1427 aa22.75■■□□□ 1.23
TRIM13-201ENST00000356017 CEP170BQ9Y4F5 1589 aaPredicted RBP22.75■■□□□ 1.23
TRIM13-201ENST00000356017 THEMISQ8N1K5 641 aaPredicted RBP22.75■■□□□ 1.23
TRIM13-201ENST00000356017 LMTK3Q96Q04 1460 aa22.74■■□□□ 1.23
TRIM13-201ENST00000356017 PIK3C2BO00750 1634 aa22.73■■□□□ 1.23
TRIM13-201ENST00000356017 UGGT1Q9NYU2 1555 aa22.73■■□□□ 1.23
TRIM13-201ENST00000356017 ZNF142P52746 1687 aaPredicted RBP22.73■■□□□ 1.23
TRIM13-201ENST00000356017 CHGAP10645 457 aaKnown RBP22.69■■□□□ 1.22
TRIM13-201ENST00000356017 KDM5AP29375 1690 aaKnown RBP22.68■■□□□ 1.22
TRIM13-201ENST00000356017 CLTCL1P53675 1640 aa22.68■■□□□ 1.22
TRIM13-201ENST00000356017 ADGRB3O60242 1522 aa22.67■■□□□ 1.22
TRIM13-201ENST00000356017 UBR1Q8IWV7 1749 aa22.65■■□□□ 1.22
TRIM13-201ENST00000356017 HSPA2P54652 639 aa22.65■■□□□ 1.22
TRIM13-201ENST00000356017 TMEM131LA2VDJ0 1609 aa22.64■■□□□ 1.21
TRIM13-201ENST00000356017 HDGFP51858 240 aaKnown RBP22.64■■□□□ 1.21
TRIM13-201ENST00000356017 TMEM2Q9UHN6 1383 aa22.62■■□□□ 1.21
TRIM13-201ENST00000356017 ZNF326Q5BKZ1 582 aaKnown RBP22.61■■□□□ 1.21
TRIM13-201ENST00000356017 CLSPNQ9HAW4 1339 aa22.61■■□□□ 1.21
TRIM13-201ENST00000356017 KIF1BO60333 1816 aa22.61■■□□□ 1.21
TRIM13-201ENST00000356017 ANKLE2Q86XL3 938 aa22.6■■□□□ 1.21
TRIM13-201ENST00000356017 EID1Q9Y6B2 187 aa22.6■■□□□ 1.21
TRIM13-201ENST00000356017 NEURL4Q96JN8 1562 aa22.59■■□□□ 1.21
TRIM13-201ENST00000356017 SLIT1O75093 1534 aa22.59■■□□□ 1.21
TRIM13-201ENST00000356017 RPGRIP1LQ68CZ1 1315 aa22.59■■□□□ 1.21
TRIM13-201ENST00000356017 CCER1Q8TC90 406 aaPredicted RBP22.59■■□□□ 1.21
TRIM13-201ENST00000356017 ARHGAP23Q9P227 1491 aa22.59■■□□□ 1.21
TRIM13-201ENST00000356017 SPATA31E1Q6ZUB1 1445 aa22.58■■□□□ 1.21
TRIM13-201ENST00000356017 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.58■■□□□ 1.21
TRIM13-201ENST00000356017 RGL3Q3MIN7 710 aa22.57■■□□□ 1.2
TRIM13-201ENST00000356017 TXNDC2Q86VQ3 553 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 465.7 ms