RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 ABCA6Q8N139 1617 aa19.81■□□□□ 0.76
HOXA1-202ENST00000355633 A2MP01023 1474 aa19.8■□□□□ 0.76
HOXA1-202ENST00000355633 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.8■□□□□ 0.76
HOXA1-202ENST00000355633 IQGAP3Q86VI3 1631 aa19.8■□□□□ 0.76
HOXA1-202ENST00000355633 PKD2Q13563 968 aa19.79■□□□□ 0.76
HOXA1-202ENST00000355633 ZMYM4Q5VZL5 1548 aa19.79■□□□□ 0.76
HOXA1-202ENST00000355633 DEPDC5O75140 1603 aa19.78■□□□□ 0.76
HOXA1-202ENST00000355633 ANKRD30BQ9BXX2 1392 aa19.78■□□□□ 0.76
HOXA1-202ENST00000355633 DIP2CQ9Y2E4 1556 aa19.77■□□□□ 0.75
HOXA1-202ENST00000355633 TIMELESSQ9UNS1 1208 aa19.76■□□□□ 0.75
HOXA1-202ENST00000355633 KIF3BO15066 747 aa19.76■□□□□ 0.75
HOXA1-202ENST00000355633 YEATS2Q9ULM3 1422 aa19.73■□□□□ 0.75
HOXA1-202ENST00000355633 TONSLQ96HA7 1378 aa19.73■□□□□ 0.75
HOXA1-202ENST00000355633 TRHP20396 242 aaPredicted RBP19.72■□□□□ 0.75
HOXA1-202ENST00000355633 PRDM15P57071 1507 aaPredicted RBP19.71■□□□□ 0.75
HOXA1-202ENST00000355633 KANK1Q14678 1352 aa19.71■□□□□ 0.75
HOXA1-202ENST00000355633 BCORL1Q5H9F3 1711 aa19.71■□□□□ 0.75
HOXA1-202ENST00000355633 COL17A1Q9UMD9 1497 aaPredicted RBP19.71■□□□□ 0.75
HOXA1-202ENST00000355633 MROH1Q8NDA8 1641 aa19.71■□□□□ 0.75
HOXA1-202ENST00000355633 RNF17Q9BXT8 1623 aaKnown RBP19.7■□□□□ 0.74
HOXA1-202ENST00000355633 VWDEQ8N2E2 1590 aa19.69■□□□□ 0.74
HOXA1-202ENST00000355633 RPRD2Q5VT52 1461 aaKnown RBP19.69■□□□□ 0.74
HOXA1-202ENST00000355633 TET3O43151 1660 aa19.66■□□□□ 0.74
HOXA1-202ENST00000355633 ATP10AO60312 1499 aa19.65■□□□□ 0.74
HOXA1-202ENST00000355633 E9PCH4 1651 aa19.63■□□□□ 0.73
HOXA1-202ENST00000355633 REREQ9P2R6 1566 aa19.63■□□□□ 0.73
HOXA1-202ENST00000355633 PPP1R15AO75807 674 aaPredicted RBP19.63■□□□□ 0.73
HOXA1-202ENST00000355633 ARHGEF40Q8TER5 1519 aa19.62■□□□□ 0.73
HOXA1-202ENST00000355633 GGT6Q6P531 493 aa19.62■□□□□ 0.73
HOXA1-202ENST00000355633 LMTK2Q8IWU2 1503 aa19.61■□□□□ 0.73
HOXA1-202ENST00000355633 CEP152O94986 1710 aa19.61■□□□□ 0.73
HOXA1-202ENST00000355633 PLA2R1Q13018 1463 aa19.59■□□□□ 0.73
HOXA1-202ENST00000355633 EFCAB6Q5THR3 1501 aa19.58■□□□□ 0.73
HOXA1-202ENST00000355633 CCDC144AA2RUR9 1427 aa19.58■□□□□ 0.73
HOXA1-202ENST00000355633 L3MBTL2Q969R5 705 aa19.58■□□□□ 0.72
HOXA1-202ENST00000355633 AGLP35573 1532 aa19.57■□□□□ 0.72
HOXA1-202ENST00000355633 SPHKAPQ2M3C7 1700 aa19.56■□□□□ 0.72
HOXA1-202ENST00000355633 ABCC3O15438 1527 aa19.56■□□□□ 0.72
HOXA1-202ENST00000355633 WASHC2CQ9Y4E1 1318 aa19.55■□□□□ 0.72
HOXA1-202ENST00000355633 ZC3H13Q5T200 1668 aaKnown RBP19.54■□□□□ 0.72
HOXA1-202ENST00000355633 TRPM2O94759 1503 aa19.54■□□□□ 0.72
HOXA1-202ENST00000355633 PTPRTO14522 1441 aa19.53■□□□□ 0.72
HOXA1-202ENST00000355633 SIGLEC1Q9BZZ2 1709 aa19.52■□□□□ 0.72
HOXA1-202ENST00000355633 CAMSAP1Q5T5Y3 1602 aa19.52■□□□□ 0.72
HOXA1-202ENST00000355633 ZNF316A6NFI3 1004 aaPredicted RBP19.51■□□□□ 0.71
HOXA1-202ENST00000355633 NPATQ14207 1427 aa19.49■□□□□ 0.71
HOXA1-202ENST00000355633 CLTCL1P53675 1640 aa19.47■□□□□ 0.71
HOXA1-202ENST00000355633 PPP6R1Q9UPN7 881 aa19.46■□□□□ 0.71
HOXA1-202ENST00000355633 ARHGAP31Q2M1Z3 1444 aa19.45■□□□□ 0.7
HOXA1-202ENST00000355633 CFAP65Q6ZU64 1925 aaKnown RBP19.44■□□□□ 0.7
HOXA1-202ENST00000355633 CNTLNQ9NXG0 1405 aa19.42■□□□□ 0.7
HOXA1-202ENST00000355633 MLECQ14165 292 aa19.42■□□□□ 0.7
HOXA1-202ENST00000355633 NBPF8Q3BBV2 869 aa19.42■□□□□ 0.7
HOXA1-202ENST00000355633 RGL3Q3MIN7 710 aa19.42■□□□□ 0.7
HOXA1-202ENST00000355633 DCAF11Q8TEB1 546 aa19.41■□□□□ 0.7
HOXA1-202ENST00000355633 SPATA31E1Q6ZUB1 1445 aa19.41■□□□□ 0.7
HOXA1-202ENST00000355633 ARID4BQ4LE39 1312 aaPredicted RBP19.41■□□□□ 0.7
HOXA1-202ENST00000355633 CLTCQ00610 1675 aaKnown RBP19.41■□□□□ 0.7
HOXA1-202ENST00000355633 UGGT1Q9NYU2 1555 aa19.4■□□□□ 0.7
HOXA1-202ENST00000355633 NOS1P29475 1434 aa19.4■□□□□ 0.7
HOXA1-202ENST00000355633 UHRF1BP1Q6BDS2 1440 aa19.39■□□□□ 0.69
HOXA1-202ENST00000355633 KIF1BO60333 1816 aa19.39■□□□□ 0.69
HOXA1-202ENST00000355633 KDM2AQ9Y2K7 1162 aa19.39■□□□□ 0.69
HOXA1-202ENST00000355633 NEURL4Q96JN8 1562 aa19.38■□□□□ 0.69
HOXA1-202ENST00000355633 ZNF326Q5BKZ1 582 aaKnown RBP19.37■□□□□ 0.69
HOXA1-202ENST00000355633 PREX1Q8TCU6 1659 aa19.37■□□□□ 0.69
HOXA1-202ENST00000355633 SYNMO15061 1565 aa19.35■□□□□ 0.69
HOXA1-202ENST00000355633 ESF1Q9H501 851 aaKnown RBP19.35■□□□□ 0.69
HOXA1-202ENST00000355633 PIK3C2BO00750 1634 aa19.34■□□□□ 0.69
HOXA1-202ENST00000355633 MROH2AA6NES4 1674 aa19.32■□□□□ 0.68
HOXA1-202ENST00000355633 PRAG1Q86YV5 1406 aa19.32■□□□□ 0.68
HOXA1-202ENST00000355633 ERVK-7P63135 1459 aa19.32■□□□□ 0.68
HOXA1-202ENST00000355633 RALGAPBQ86X10 1494 aa19.32■□□□□ 0.68
HOXA1-202ENST00000355633 ADGRB3O60242 1522 aa19.31■□□□□ 0.68
HOXA1-202ENST00000355633 STAC3Q96MF2 364 aa19.29■□□□□ 0.68
HOXA1-202ENST00000355633 CHGAP10645 457 aaKnown RBP19.29■□□□□ 0.68
HOXA1-202ENST00000355633 EIF4G2P78344 907 aaKnown RBP eCLIP19.29■□□□□ 0.68
HOXA1-202ENST00000355633 FBXO31Q5XUX0 539 aaPredicted RBP19.29■□□□□ 0.68
HOXA1-202ENST00000355633 SLC52A1Q9NWF4 448 aa19.29■□□□□ 0.68
HOXA1-202ENST00000355633 ZMYM3Q14202 1370 aa19.28■□□□□ 0.68
HOXA1-202ENST00000355633 TRPM1Q7Z4N2 1603 aa19.28■□□□□ 0.68
HOXA1-202ENST00000355633 SPATA31D1Q6ZQQ2 1576 aa19.27■□□□□ 0.68
HOXA1-202ENST00000355633 HIRIP3Q9BW71 556 aaPredicted RBP19.27■□□□□ 0.67
HOXA1-202ENST00000355633 IFT172Q9UG01 1749 aa19.26■□□□□ 0.67
HOXA1-202ENST00000355633 HSPA5P11021 654 aaKnown RBP19.25■□□□□ 0.67
HOXA1-202ENST00000355633 IDI1Q13907 227 aa19.25■□□□□ 0.67
HOXA1-202ENST00000355633 DIEXFQ68CQ4 756 aaKnown RBP19.25■□□□□ 0.67
HOXA1-202ENST00000355633 MADDQ8WXG6 1647 aa19.25■□□□□ 0.67
HOXA1-202ENST00000355633 MYOM2P54296 1465 aa19.24■□□□□ 0.67
HOXA1-202ENST00000355633 ROCK2O75116 1388 aaKnown RBP19.23■□□□□ 0.67
HOXA1-202ENST00000355633 FER1L4A9Z1Z3 1794 aa19.23■□□□□ 0.67
HOXA1-202ENST00000355633 CARD11Q9BXL7 1154 aa19.22■□□□□ 0.67
HOXA1-202ENST00000355633 PPLO60437 1756 aa19.22■□□□□ 0.67
HOXA1-202ENST00000355633 TMEM131LA2VDJ0 1609 aa19.21■□□□□ 0.67
HOXA1-202ENST00000355633 RPGRIP1LQ68CZ1 1315 aa19.21■□□□□ 0.67
HOXA1-202ENST00000355633 USP47Q96K76 1375 aa19.2■□□□□ 0.66
HOXA1-202ENST00000355633 MYO5BQ9ULV0 1848 aa19.19■□□□□ 0.66
HOXA1-202ENST00000355633 GPRASP1Q5JY77 1395 aa19.18■□□□□ 0.66
HOXA1-202ENST00000355633 LAMC1P11047 1609 aa19.18■□□□□ 0.66
HOXA1-202ENST00000355633 NBPF1Q3BBV0 1214 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms