RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 DIP2CQ9Y2E4 1556 aa22.75■■□□□ 1.23
CTSA-202ENST00000354880 COL17A1Q9UMD9 1497 aaPredicted RBP22.75■■□□□ 1.23
CTSA-202ENST00000354880 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.75■■□□□ 1.235e-7■□□□□ 10.4
CTSA-202ENST00000354880 FAM135AQ9P2D6 1515 aa22.74■■□□□ 1.23
CTSA-202ENST00000354880 SIN3AQ96ST3 1273 aa22.73■■□□□ 1.23
CTSA-202ENST00000354880 YEATS2Q9ULM3 1422 aa22.73■■□□□ 1.23
CTSA-202ENST00000354880 DEPDC5O75140 1603 aa22.73■■□□□ 1.23
CTSA-202ENST00000354880 IQGAP3Q86VI3 1631 aa22.73■■□□□ 1.23
CTSA-202ENST00000354880 KIF3BO15066 747 aa22.73■■□□□ 1.23
CTSA-202ENST00000354880 FOXD1Q16676 465 aa22.73■■□□□ 1.23
CTSA-202ENST00000354880 PKD2Q13563 968 aa22.72■■□□□ 1.23
CTSA-202ENST00000354880 NEUROD1Q13562 356 aa22.7■■□□□ 1.22
CTSA-202ENST00000354880 ANKRD30BQ9BXX2 1392 aa22.69■■□□□ 1.22
CTSA-202ENST00000354880 BCORL1Q5H9F3 1711 aa22.67■■□□□ 1.22
CTSA-202ENST00000354880 PRDM15P57071 1507 aaPredicted RBP22.66■■□□□ 1.22
CTSA-202ENST00000354880 RNF17Q9BXT8 1623 aaKnown RBP22.66■■□□□ 1.22
CTSA-202ENST00000354880 KANK1Q14678 1352 aa22.65■■□□□ 1.22
CTSA-202ENST00000354880 MROH1Q8NDA8 1641 aa22.65■■□□□ 1.22
CTSA-202ENST00000354880 ATP10AO60312 1499 aa22.65■■□□□ 1.22
CTSA-202ENST00000354880 TIMELESSQ9UNS1 1208 aa22.64■■□□□ 1.21
CTSA-202ENST00000354880 VWDEQ8N2E2 1590 aa22.63■■□□□ 1.21
CTSA-202ENST00000354880 REREQ9P2R6 1566 aa22.61■■□□□ 1.21
CTSA-202ENST00000354880 ARHGEF40Q8TER5 1519 aa22.6■■□□□ 1.21
CTSA-202ENST00000354880 GGT6Q6P531 493 aa22.59■■□□□ 1.21
CTSA-202ENST00000354880 TONSLQ96HA7 1378 aa22.58■■□□□ 1.21
CTSA-202ENST00000354880 TET3O43151 1660 aa22.58■■□□□ 1.21
CTSA-202ENST00000354880 RPRD2Q5VT52 1461 aaKnown RBP22.57■■□□□ 1.2
CTSA-202ENST00000354880 AGLP35573 1532 aa22.55■■□□□ 1.2
CTSA-202ENST00000354880 LMTK2Q8IWU2 1503 aa22.55■■□□□ 1.2
CTSA-202ENST00000354880 E9PCH4 1651 aa22.54■■□□□ 1.2
CTSA-202ENST00000354880 CEP152O94986 1710 aa22.52■■□□□ 1.2
CTSA-202ENST00000354880 EFCAB6Q5THR3 1501 aa22.51■■□□□ 1.19
CTSA-202ENST00000354880 PLA2R1Q13018 1463 aa22.5■■□□□ 1.19
CTSA-202ENST00000354880 WASHC2CQ9Y4E1 1318 aa22.5■■□□□ 1.19
CTSA-202ENST00000354880 ABCC3O15438 1527 aa22.49■■□□□ 1.19
CTSA-202ENST00000354880 SIGLEC1Q9BZZ2 1709 aa22.48■■□□□ 1.19
CTSA-202ENST00000354880 CCDC144AA2RUR9 1427 aa22.48■■□□□ 1.19
CTSA-202ENST00000354880 ZC3H13Q5T200 1668 aaKnown RBP22.47■■□□□ 1.19
CTSA-202ENST00000354880 PPP1R15AO75807 674 aaPredicted RBP22.47■■□□□ 1.19
CTSA-202ENST00000354880 SPHKAPQ2M3C7 1700 aa22.45■■□□□ 1.18
CTSA-202ENST00000354880 PTPRTO14522 1441 aa22.45■■□□□ 1.18
CTSA-202ENST00000354880 TRPM2O94759 1503 aa22.44■■□□□ 1.18
CTSA-202ENST00000354880 L3MBTL2Q969R5 705 aa22.43■■□□□ 1.18
CTSA-202ENST00000354880 PPP6R1Q9UPN7 881 aa22.43■■□□□ 1.18
CTSA-202ENST00000354880 CAMSAP1Q5T5Y3 1602 aa22.43■■□□□ 1.18
CTSA-202ENST00000354880 NPATQ14207 1427 aa22.41■■□□□ 1.18
CTSA-202ENST00000354880 ARHGAP31Q2M1Z3 1444 aa22.38■■□□□ 1.17
CTSA-202ENST00000354880 ARID4BQ4LE39 1312 aaPredicted RBP22.38■■□□□ 1.17
CTSA-202ENST00000354880 MLECQ14165 292 aa22.37■■□□□ 1.17
CTSA-202ENST00000354880 CFAP65Q6ZU64 1925 aaKnown RBP22.35■■□□□ 1.17
CTSA-202ENST00000354880 CLTCL1P53675 1640 aa22.34■■□□□ 1.17
CTSA-202ENST00000354880 CNTLNQ9NXG0 1405 aa22.33■■□□□ 1.17
CTSA-202ENST00000354880 CLTCQ00610 1675 aaKnown RBP22.32■■□□□ 1.16
CTSA-202ENST00000354880 NOS1P29475 1434 aa22.31■■□□□ 1.16
CTSA-202ENST00000354880 RGL3Q3MIN7 710 aa22.29■■□□□ 1.16
CTSA-202ENST00000354880 ESF1Q9H501 851 aaKnown RBP22.29■■□□□ 1.16
CTSA-202ENST00000354880 SPATA31E1Q6ZUB1 1445 aa22.29■■□□□ 1.16
CTSA-202ENST00000354880 UGGT1Q9NYU2 1555 aa22.29■■□□□ 1.16
CTSA-202ENST00000354880 DCAF11Q8TEB1 546 aa22.27■■□□□ 1.16
CTSA-202ENST00000354880 PREX1Q8TCU6 1659 aa22.27■■□□□ 1.16
CTSA-202ENST00000354880 KIF1BO60333 1816 aa22.26■■□□□ 1.15
CTSA-202ENST00000354880 SYNMO15061 1565 aa22.25■■□□□ 1.15
CTSA-202ENST00000354880 NEURL4Q96JN8 1562 aa22.25■■□□□ 1.15
CTSA-202ENST00000354880 NBPF8Q3BBV2 869 aa22.25■■□□□ 1.15
CTSA-202ENST00000354880 ZNF316A6NFI3 1004 aaPredicted RBP22.24■■□□□ 1.15
CTSA-202ENST00000354880 UHRF1BP1Q6BDS2 1440 aa22.23■■□□□ 1.15
CTSA-202ENST00000354880 KDM2AQ9Y2K7 1162 aa22.23■■□□□ 1.15
CTSA-202ENST00000354880 PIK3C2BO00750 1634 aa22.23■■□□□ 1.15
CTSA-202ENST00000354880 ERVK-7P63135 1459 aa22.22■■□□□ 1.15
CTSA-202ENST00000354880 ZMYM3Q14202 1370 aa22.21■■□□□ 1.15
CTSA-202ENST00000354880 FBXO31Q5XUX0 539 aaPredicted RBP22.21■■□□□ 1.15
CTSA-202ENST00000354880 ZNF326Q5BKZ1 582 aaKnown RBP22.2■■□□□ 1.14
CTSA-202ENST00000354880 SLC52A1Q9NWF4 448 aa22.2■■□□□ 1.14
CTSA-202ENST00000354880 MROH2AA6NES4 1674 aa22.19■■□□□ 1.14
CTSA-202ENST00000354880 ADGRB3O60242 1522 aa22.18■■□□□ 1.14
CTSA-202ENST00000354880 SPATA31D1Q6ZQQ2 1576 aa22.18■■□□□ 1.14
CTSA-202ENST00000354880 IDI1Q13907 227 aa22.17■■□□□ 1.14
CTSA-202ENST00000354880 STAC3Q96MF2 364 aa22.17■■□□□ 1.14
CTSA-202ENST00000354880 CHGAP10645 457 aaKnown RBP22.16■■□□□ 1.14
CTSA-202ENST00000354880 PRAG1Q86YV5 1406 aa22.16■■□□□ 1.14
CTSA-202ENST00000354880 FER1L4A9Z1Z3 1794 aa22.16■■□□□ 1.14
CTSA-202ENST00000354880 RALGAPBQ86X10 1494 aa22.13■■□□□ 1.13
CTSA-202ENST00000354880 IFT172Q9UG01 1749 aa22.1■■□□□ 1.13
CTSA-202ENST00000354880 TRPM1Q7Z4N2 1603 aa22.09■■□□□ 1.13
CTSA-202ENST00000354880 MYOM2P54296 1465 aa22.08■■□□□ 1.13
CTSA-202ENST00000354880 RPGRIP1LQ68CZ1 1315 aa22.08■■□□□ 1.13
CTSA-202ENST00000354880 TMEM131LA2VDJ0 1609 aa22.08■■□□□ 1.13
CTSA-202ENST00000354880 MADDQ8WXG6 1647 aa22.08■■□□□ 1.13
CTSA-202ENST00000354880 EIF4G2P78344 907 aaKnown RBP eCLIP22.08■■□□□ 1.12
CTSA-202ENST00000354880 C3P01024 1663 aa22.07■■□□□ 1.12
CTSA-202ENST00000354880 TNRQ92752 1358 aa22.06■■□□□ 1.12
CTSA-202ENST00000354880 PPLO60437 1756 aa22.06■■□□□ 1.12
CTSA-202ENST00000354880 MYO5BQ9ULV0 1848 aa22.06■■□□□ 1.12
CTSA-202ENST00000354880 ROCK2O75116 1388 aaKnown RBP22.05■■□□□ 1.12
CTSA-202ENST00000354880 CEBPAP49715 358 aaPredicted RBP22.05■■□□□ 1.12
CTSA-202ENST00000354880 HIRIP3Q9BW71 556 aaPredicted RBP22.04■■□□□ 1.12
CTSA-202ENST00000354880 ADAMTSL3P82987 1691 aa22.04■■□□□ 1.12
CTSA-202ENST00000354880 HSPA5P11021 654 aaKnown RBP22.03■■□□□ 1.12
CTSA-202ENST00000354880 CARD11Q9BXL7 1154 aa22.03■■□□□ 1.12
CTSA-202ENST00000354880 STAG3Q9UJ98 1225 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms